Serveur d'exploration sur les pandémies grippales

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Coordinating the real‐time use of global influenza activity data for better public health planning

Identifieur interne : 000357 ( Main/Merge ); précédent : 000356; suivant : 000358

Coordinating the real‐time use of global influenza activity data for better public health planning

Auteurs : Matthew Biggerstaff ; Fredrick Scott Dahlgren ; Julia Fitzner ; Dylan George ; Aspen Hammond ; Ian Hall ; David Haw ; Natsuko Imai ; Michael A. Johansson ; Sarah Kramer ; James M. Mccaw ; Robert Moss ; Richard Pebody ; Jonathan M. Read ; Carrie Reed ; Nicholas G. Reich ; Steven Riley ; Katelijn Vandemaele ; Cecile Viboud ; Joseph T. Wu

Source :

RBID : PMC:7040973

Abstract

Abstract

Health planners from global to local levels must anticipate year‐to‐year and week‐to‐week variation in seasonal influenza activity when planning for and responding to epidemics to mitigate their impact. To help with this, countries routinely collect incidence of mild and severe respiratory illness and virologic data on circulating subtypes and use these data for situational awareness, burden of disease estimates and severity assessments. Advanced analytics and modelling are increasingly used to aid planning and response activities by describing key features of influenza activity for a given location and generating forecasts that can be translated to useful actions such as enhanced risk communications, and informing clinical supply chains. Here, we describe the formation of the Influenza Incidence Analytics Group (IIAG), a coordinated global effort to apply advanced analytics and modelling to public influenza data, both epidemiological and virologic, in real‐time and thus provide additional insights to countries who provide routine surveillance data to WHO. Our objectives are to systematically increase the value of data to health planners by applying advanced analytics and forecasting and for results to be immediately reproducible and deployable using an open repository of data and code. We expect the resources we develop and the associated community to provide an attractive option for the open analysis of key epidemiological data during seasonal epidemics and the early stages of an influenza pandemic.


Url:
DOI: 10.1111/irv.12705
PubMed: 32096594
PubMed Central: 7040973

Links toward previous steps (curation, corpus...)


Links to Exploration step

PMC:7040973

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Coordinating the real‐time use of global influenza activity data for better public health planning</title>
<author>
<name sortKey="Biggerstaff, Matthew" sort="Biggerstaff, Matthew" uniqKey="Biggerstaff M" first="Matthew" last="Biggerstaff">Matthew Biggerstaff</name>
<affiliation>
<nlm:aff id="irv12705-aff-0001"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Dahlgren, Fredrick Scott" sort="Dahlgren, Fredrick Scott" uniqKey="Dahlgren F" first="Fredrick Scott" last="Dahlgren">Fredrick Scott Dahlgren</name>
<affiliation>
<nlm:aff id="irv12705-aff-0001"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Fitzner, Julia" sort="Fitzner, Julia" uniqKey="Fitzner J" first="Julia" last="Fitzner">Julia Fitzner</name>
<affiliation>
<nlm:aff id="irv12705-aff-0002"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="George, Dylan" sort="George, Dylan" uniqKey="George D" first="Dylan" last="George">Dylan George</name>
<affiliation>
<nlm:aff id="irv12705-aff-0003"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Hammond, Aspen" sort="Hammond, Aspen" uniqKey="Hammond A" first="Aspen" last="Hammond">Aspen Hammond</name>
<affiliation>
<nlm:aff id="irv12705-aff-0002"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Hall, Ian" sort="Hall, Ian" uniqKey="Hall I" first="Ian" last="Hall">Ian Hall</name>
<affiliation>
<nlm:aff id="irv12705-aff-0004"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Haw, David" sort="Haw, David" uniqKey="Haw D" first="David" last="Haw">David Haw</name>
<affiliation>
<nlm:aff id="irv12705-aff-0005"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Imai, Natsuko" sort="Imai, Natsuko" uniqKey="Imai N" first="Natsuko" last="Imai">Natsuko Imai</name>
<affiliation>
<nlm:aff id="irv12705-aff-0005"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Johansson, Michael A" sort="Johansson, Michael A" uniqKey="Johansson M" first="Michael A." last="Johansson">Michael A. Johansson</name>
<affiliation>
<nlm:aff id="irv12705-aff-0006"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Kramer, Sarah" sort="Kramer, Sarah" uniqKey="Kramer S" first="Sarah" last="Kramer">Sarah Kramer</name>
<affiliation>
<nlm:aff id="irv12705-aff-0007"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Mccaw, James M" sort="Mccaw, James M" uniqKey="Mccaw J" first="James M." last="Mccaw">James M. Mccaw</name>
<affiliation>
<nlm:aff id="irv12705-aff-0008"></nlm:aff>
</affiliation>
<affiliation>
<nlm:aff id="irv12705-aff-0009"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Moss, Robert" sort="Moss, Robert" uniqKey="Moss R" first="Robert" last="Moss">Robert Moss</name>
<affiliation>
<nlm:aff id="irv12705-aff-0008"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Pebody, Richard" sort="Pebody, Richard" uniqKey="Pebody R" first="Richard" last="Pebody">Richard Pebody</name>
<affiliation>
<nlm:aff id="irv12705-aff-0010"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Read, Jonathan M" sort="Read, Jonathan M" uniqKey="Read J" first="Jonathan M." last="Read">Jonathan M. Read</name>
<affiliation>
<nlm:aff id="irv12705-aff-0011"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Reed, Carrie" sort="Reed, Carrie" uniqKey="Reed C" first="Carrie" last="Reed">Carrie Reed</name>
<affiliation>
<nlm:aff id="irv12705-aff-0001"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Reich, Nicholas G" sort="Reich, Nicholas G" uniqKey="Reich N" first="Nicholas G." last="Reich">Nicholas G. Reich</name>
<affiliation>
<nlm:aff id="irv12705-aff-0012"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Riley, Steven" sort="Riley, Steven" uniqKey="Riley S" first="Steven" last="Riley">Steven Riley</name>
<affiliation>
<nlm:aff id="irv12705-aff-0005"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Vandemaele, Katelijn" sort="Vandemaele, Katelijn" uniqKey="Vandemaele K" first="Katelijn" last="Vandemaele">Katelijn Vandemaele</name>
<affiliation>
<nlm:aff id="irv12705-aff-0002"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Viboud, Cecile" sort="Viboud, Cecile" uniqKey="Viboud C" first="Cecile" last="Viboud">Cecile Viboud</name>
<affiliation>
<nlm:aff id="irv12705-aff-0013"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Wu, Joseph T" sort="Wu, Joseph T" uniqKey="Wu J" first="Joseph T." last="Wu">Joseph T. Wu</name>
<affiliation>
<nlm:aff id="irv12705-aff-0014"></nlm:aff>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">32096594</idno>
<idno type="pmc">7040973</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7040973</idno>
<idno type="RBID">PMC:7040973</idno>
<idno type="doi">10.1111/irv.12705</idno>
<date when="2019">2019</date>
<idno type="wicri:Area/Pmc/Corpus">000A88</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000A88</idno>
<idno type="wicri:Area/Pmc/Curation">000A88</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000A88</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000083</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000083</idno>
<idno type="wicri:source">PubMed</idno>
<idno type="RBID">pubmed:32096594</idno>
<idno type="wicri:Area/PubMed/Corpus">000047</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000047</idno>
<idno type="wicri:Area/PubMed/Curation">000047</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000047</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000050</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000050</idno>
<idno type="wicri:Area/Ncbi/Merge">002051</idno>
<idno type="wicri:Area/Ncbi/Curation">002051</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">002051</idno>
<idno type="wicri:doubleKey">1750-2640:2019:Biggerstaff M:coordinating:the:real</idno>
<idno type="wicri:Area/Main/Merge">000357</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Coordinating the real‐time use of global influenza activity data for better public health planning</title>
<author>
<name sortKey="Biggerstaff, Matthew" sort="Biggerstaff, Matthew" uniqKey="Biggerstaff M" first="Matthew" last="Biggerstaff">Matthew Biggerstaff</name>
<affiliation>
<nlm:aff id="irv12705-aff-0001"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Dahlgren, Fredrick Scott" sort="Dahlgren, Fredrick Scott" uniqKey="Dahlgren F" first="Fredrick Scott" last="Dahlgren">Fredrick Scott Dahlgren</name>
<affiliation>
<nlm:aff id="irv12705-aff-0001"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Fitzner, Julia" sort="Fitzner, Julia" uniqKey="Fitzner J" first="Julia" last="Fitzner">Julia Fitzner</name>
<affiliation>
<nlm:aff id="irv12705-aff-0002"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="George, Dylan" sort="George, Dylan" uniqKey="George D" first="Dylan" last="George">Dylan George</name>
<affiliation>
<nlm:aff id="irv12705-aff-0003"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Hammond, Aspen" sort="Hammond, Aspen" uniqKey="Hammond A" first="Aspen" last="Hammond">Aspen Hammond</name>
<affiliation>
<nlm:aff id="irv12705-aff-0002"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Hall, Ian" sort="Hall, Ian" uniqKey="Hall I" first="Ian" last="Hall">Ian Hall</name>
<affiliation>
<nlm:aff id="irv12705-aff-0004"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Haw, David" sort="Haw, David" uniqKey="Haw D" first="David" last="Haw">David Haw</name>
<affiliation>
<nlm:aff id="irv12705-aff-0005"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Imai, Natsuko" sort="Imai, Natsuko" uniqKey="Imai N" first="Natsuko" last="Imai">Natsuko Imai</name>
<affiliation>
<nlm:aff id="irv12705-aff-0005"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Johansson, Michael A" sort="Johansson, Michael A" uniqKey="Johansson M" first="Michael A." last="Johansson">Michael A. Johansson</name>
<affiliation>
<nlm:aff id="irv12705-aff-0006"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Kramer, Sarah" sort="Kramer, Sarah" uniqKey="Kramer S" first="Sarah" last="Kramer">Sarah Kramer</name>
<affiliation>
<nlm:aff id="irv12705-aff-0007"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Mccaw, James M" sort="Mccaw, James M" uniqKey="Mccaw J" first="James M." last="Mccaw">James M. Mccaw</name>
<affiliation>
<nlm:aff id="irv12705-aff-0008"></nlm:aff>
</affiliation>
<affiliation>
<nlm:aff id="irv12705-aff-0009"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Moss, Robert" sort="Moss, Robert" uniqKey="Moss R" first="Robert" last="Moss">Robert Moss</name>
<affiliation>
<nlm:aff id="irv12705-aff-0008"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Pebody, Richard" sort="Pebody, Richard" uniqKey="Pebody R" first="Richard" last="Pebody">Richard Pebody</name>
<affiliation>
<nlm:aff id="irv12705-aff-0010"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Read, Jonathan M" sort="Read, Jonathan M" uniqKey="Read J" first="Jonathan M." last="Read">Jonathan M. Read</name>
<affiliation>
<nlm:aff id="irv12705-aff-0011"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Reed, Carrie" sort="Reed, Carrie" uniqKey="Reed C" first="Carrie" last="Reed">Carrie Reed</name>
<affiliation>
<nlm:aff id="irv12705-aff-0001"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Reich, Nicholas G" sort="Reich, Nicholas G" uniqKey="Reich N" first="Nicholas G." last="Reich">Nicholas G. Reich</name>
<affiliation>
<nlm:aff id="irv12705-aff-0012"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Riley, Steven" sort="Riley, Steven" uniqKey="Riley S" first="Steven" last="Riley">Steven Riley</name>
<affiliation>
<nlm:aff id="irv12705-aff-0005"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Vandemaele, Katelijn" sort="Vandemaele, Katelijn" uniqKey="Vandemaele K" first="Katelijn" last="Vandemaele">Katelijn Vandemaele</name>
<affiliation>
<nlm:aff id="irv12705-aff-0002"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Viboud, Cecile" sort="Viboud, Cecile" uniqKey="Viboud C" first="Cecile" last="Viboud">Cecile Viboud</name>
<affiliation>
<nlm:aff id="irv12705-aff-0013"></nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Wu, Joseph T" sort="Wu, Joseph T" uniqKey="Wu J" first="Joseph T." last="Wu">Joseph T. Wu</name>
<affiliation>
<nlm:aff id="irv12705-aff-0014"></nlm:aff>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Influenza and Other Respiratory Viruses</title>
<idno type="ISSN">1750-2640</idno>
<idno type="eISSN">1750-2659</idno>
<imprint>
<date when="2019">2019</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<title>Abstract</title>
<p>Health planners from global to local levels must anticipate year‐to‐year and week‐to‐week variation in seasonal influenza activity when planning for and responding to epidemics to mitigate their impact. To help with this, countries routinely collect incidence of mild and severe respiratory illness and virologic data on circulating subtypes and use these data for situational awareness, burden of disease estimates and severity assessments. Advanced analytics and modelling are increasingly used to aid planning and response activities by describing key features of influenza activity for a given location and generating forecasts that can be translated to useful actions such as enhanced risk communications, and informing clinical supply chains. Here, we describe the formation of the Influenza Incidence Analytics Group (IIAG), a coordinated global effort to apply advanced analytics and modelling to public influenza data, both epidemiological and virologic, in real‐time and thus provide additional insights to countries who provide routine surveillance data to WHO. Our objectives are to systematically increase the value of data to health planners by applying advanced analytics and forecasting and for results to be immediately reproducible and deployable using an open repository of data and code. We expect the resources we develop and the associated community to provide an attractive option for the open analysis of key epidemiological data during seasonal epidemics and the early stages of an influenza pandemic.</p>
</div>
</front>
<back>
<div1 type="bibliography">
<listBibl>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
</listBibl>
</div1>
</back>
</TEI>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/PandemieGrippaleV1/Data/Main/Merge
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000357 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Merge/biblio.hfd -nk 000357 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    PandemieGrippaleV1
   |flux=    Main
   |étape=   Merge
   |type=    RBID
   |clé=     PMC:7040973
   |texte=   Coordinating the real‐time use of global influenza activity data for better public health planning
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Merge/RBID.i   -Sk "pubmed:32096594" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Merge/biblio.hfd   \
       | NlmPubMed2Wicri -a PandemieGrippaleV1 

Wicri

This area was generated with Dilib version V0.6.34.
Data generation: Wed Jun 10 11:04:28 2020. Site generation: Sun Mar 28 09:10:28 2021