The role of pneumonia and secondary bacterial infection in fatal and serious outcomes of pandemic influenza a(H1N1)pdm09
Identifieur interne : 000459 ( Main/Exploration ); précédent : 000458; suivant : 000460The role of pneumonia and secondary bacterial infection in fatal and serious outcomes of pandemic influenza a(H1N1)pdm09
Auteurs : Chandini Raina Macintyre ; Abrar Ahmad Chughtai ; Michelle Barnes ; Iman Ridda ; Holly Seale ; Renin Toms ; Anita HeywoodSource :
- BMC Infectious Diseases [ 1471-2334 ] ; 2018.
Descripteurs français
- KwdFr :
- Adulte, Co-infection (), Co-infection (virologie), Co-infection (épidémiologie), Enfant, Grippe humaine (), Grippe humaine (microbiologie), Grippe humaine (virologie), Grippe humaine (épidémiologie), Histoire du 21ème siècle, Humains, Indice de gravité médicale, Infections bactériennes (), Infections bactériennes (microbiologie), Infections bactériennes (virologie), Infections bactériennes (épidémiologie), Mortalité, Pandémies (), Pandémies (histoire), Pneumopathie infectieuse (), Pneumopathie infectieuse (microbiologie), Pneumopathie infectieuse (virologie), Pneumopathie infectieuse (épidémiologie), Prévalence, Sous-type H1N1 du virus de la grippe A (isolement et purification).
- MESH :
- histoire : Pandémies.
- isolement et purification : Sous-type H1N1 du virus de la grippe A.
- microbiologie : Grippe humaine, Infections bactériennes, Pneumopathie infectieuse.
- virologie : Co-infection, Grippe humaine, Infections bactériennes, Pneumopathie infectieuse.
- épidémiologie : Co-infection, Grippe humaine, Infections bactériennes, Pneumopathie infectieuse.
- Adulte, Co-infection, Enfant, Grippe humaine, Histoire du 21ème siècle, Humains, Indice de gravité médicale, Infections bactériennes, Mortalité, Pandémies, Pneumopathie infectieuse, Prévalence.
English descriptors
- KwdEn :
- Adult, Bacterial Infections (complications), Bacterial Infections (epidemiology), Bacterial Infections (microbiology), Bacterial Infections (virology), Child, Coinfection (complications), Coinfection (epidemiology), Coinfection (virology), History, 21st Century, Humans, Influenza A Virus, H1N1 Subtype (isolation & purification), Influenza, Human (complications), Influenza, Human (epidemiology), Influenza, Human (microbiology), Influenza, Human (virology), Mortality, Pandemics (history), Pandemics (statistics & numerical data), Pneumonia (complications), Pneumonia (epidemiology), Pneumonia (microbiology), Pneumonia (virology), Prevalence, Severity of Illness Index.
- MESH :
- complications : Bacterial Infections, Coinfection, Influenza, Human, Pneumonia.
- epidemiology : Bacterial Infections, Coinfection, Influenza, Human, Pneumonia.
- history : Pandemics.
- isolation & purification : Influenza A Virus, H1N1 Subtype.
- microbiology : Bacterial Infections, Influenza, Human, Pneumonia.
- statistics & numerical data : Pandemics.
- virology : Bacterial Infections, Coinfection, Influenza, Human, Pneumonia.
- Adult, Child, History, 21st Century, Humans, Mortality, Prevalence, Severity of Illness Index.
Abstract
The aim of this study was to estimate the prevalence of pneumonia and secondary bacterial infections during the pandemic of influenza A(H1N1)pdm09.
A systematic review was conducted to identify relevant literature in which clinical outcomes of pandemic influenza A(H1N1)pdm09 infection were described. Published studies (between 01/01/2009 and 05/07/2012) describing cases of fatal or hospitalised A(H1N1)pdm09 and including data on bacterial testing or co-infection.
Seventy five studies met the inclusion criteria. Fatal cases with autopsy specimen testing were reported in 11 studies, in which any co-infection was identified in 23% of cases (
We found that few studies of the 2009 influenza pandemic reported on bacterial complications and testing. Of studies which did report on this, secondary bacterial infection was identified in almost one in four patients, with
Url:
DOI: 10.1186/s12879-018-3548-0
PubMed: 30526505
PubMed Central: 6286525
Affiliations:
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Le document en format XML
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institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>Biosecurity Program,</institution><institution>The Kirby Institute, UNSW Medicine, University of New South Wales,</institution></institution-wrap>Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author><author><name sortKey="Chughtai, Abrar Ahmad" sort="Chughtai, Abrar Ahmad" uniqKey="Chughtai A" first="Abrar Ahmad" last="Chughtai">Abrar Ahmad Chughtai</name><affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>School of Public Health and Community Medicine, Faculty of Medicine,</institution><institution>UNSW Medicine, the University of New South Wales,</institution></institution-wrap>Samuels Building, Room 209, Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author><author><name sortKey="Barnes, Michelle" sort="Barnes, Michelle" uniqKey="Barnes M" first="Michelle" last="Barnes">Michelle Barnes</name><affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>School of Public Health and Community Medicine, Faculty of Medicine,</institution><institution>UNSW Medicine, the University of New South Wales,</institution></institution-wrap>Samuels Building, Room 209, Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author><author><name sortKey="Ridda, Iman" sort="Ridda, Iman" uniqKey="Ridda I" first="Iman" last="Ridda">Iman Ridda</name><affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>School of Public Health and Community Medicine, Faculty of Medicine,</institution><institution>UNSW Medicine, the University of New South Wales,</institution></institution-wrap>Samuels Building, Room 209, Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author><author><name sortKey="Seale, Holly" sort="Seale, Holly" uniqKey="Seale H" first="Holly" last="Seale">Holly Seale</name><affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>School of Public Health and Community Medicine, Faculty of Medicine,</institution><institution>UNSW Medicine, the University of New South Wales,</institution></institution-wrap>Samuels Building, Room 209, Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author><author><name sortKey="Toms, Renin" sort="Toms, Renin" uniqKey="Toms R" first="Renin" last="Toms">Renin Toms</name><affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>School of Public Health and Community Medicine, Faculty of Medicine,</institution><institution>UNSW Medicine, the University of New South Wales,</institution></institution-wrap>Samuels Building, Room 209, Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author><author><name sortKey="Heywood, Anita" sort="Heywood, Anita" uniqKey="Heywood A" first="Anita" last="Heywood">Anita Heywood</name><affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0004 4902 0432</institution-id><institution-id institution-id-type="GRID">grid.1005.4</institution-id><institution>School of Public Health and Community Medicine, Faculty of Medicine,</institution><institution>UNSW Medicine, the University of New South Wales,</institution></institution-wrap>Samuels Building, Room 209, Sydney, NSW 2052 Australia</nlm:aff><wicri:noCountry code="subfield">NSW 2052 Australia</wicri:noCountry></affiliation></author></analytic><series><title level="j">BMC Infectious Diseases</title><idno type="eISSN">1471-2334</idno><imprint><date when="2018">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adult</term><term>Bacterial Infections (complications)</term><term>Bacterial Infections (epidemiology)</term><term>Bacterial Infections (microbiology)</term><term>Bacterial Infections (virology)</term><term>Child</term><term>Coinfection (complications)</term><term>Coinfection (epidemiology)</term><term>Coinfection (virology)</term><term>History, 21st Century</term><term>Humans</term><term>Influenza A Virus, H1N1 Subtype (isolation & purification)</term><term>Influenza, Human (complications)</term><term>Influenza, Human (epidemiology)</term><term>Influenza, Human (microbiology)</term><term>Influenza, Human (virology)</term><term>Mortality</term><term>Pandemics (history)</term><term>Pandemics (statistics & numerical data)</term><term>Pneumonia (complications)</term><term>Pneumonia (epidemiology)</term><term>Pneumonia (microbiology)</term><term>Pneumonia (virology)</term><term>Prevalence</term><term>Severity of Illness Index</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Adulte</term><term>Co-infection ()</term><term>Co-infection (virologie)</term><term>Co-infection (épidémiologie)</term><term>Enfant</term><term>Grippe humaine ()</term><term>Grippe humaine (microbiologie)</term><term>Grippe humaine (virologie)</term><term>Grippe humaine (épidémiologie)</term><term>Histoire du 21ème siècle</term><term>Humains</term><term>Indice de gravité médicale</term><term>Infections bactériennes ()</term><term>Infections bactériennes (microbiologie)</term><term>Infections bactériennes (virologie)</term><term>Infections bactériennes (épidémiologie)</term><term>Mortalité</term><term>Pandémies ()</term><term>Pandémies (histoire)</term><term>Pneumopathie infectieuse ()</term><term>Pneumopathie infectieuse (microbiologie)</term><term>Pneumopathie infectieuse (virologie)</term><term>Pneumopathie infectieuse (épidémiologie)</term><term>Prévalence</term><term>Sous-type H1N1 du virus de la grippe A (isolement et purification)</term></keywords><keywords scheme="MESH" qualifier="complications" xml:lang="en"><term>Bacterial Infections</term><term>Coinfection</term><term>Influenza, Human</term><term>Pneumonia</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Bacterial Infections</term><term>Coinfection</term><term>Influenza, Human</term><term>Pneumonia</term></keywords><keywords scheme="MESH" qualifier="histoire" xml:lang="fr"><term>Pandémies</term></keywords><keywords scheme="MESH" qualifier="history" xml:lang="en"><term>Pandemics</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Influenza A Virus, H1N1 Subtype</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Sous-type H1N1 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Grippe humaine</term><term>Infections bactériennes</term><term>Pneumopathie infectieuse</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Bacterial Infections</term><term>Influenza, Human</term><term>Pneumonia</term></keywords><keywords scheme="MESH" qualifier="statistics & numerical data" xml:lang="en"><term>Pandemics</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Co-infection</term><term>Grippe humaine</term><term>Infections bactériennes</term><term>Pneumopathie infectieuse</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Bacterial Infections</term><term>Coinfection</term><term>Influenza, Human</term><term>Pneumonia</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Co-infection</term><term>Grippe humaine</term><term>Infections bactériennes</term><term>Pneumopathie infectieuse</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adult</term><term>Child</term><term>History, 21st Century</term><term>Humans</term><term>Mortality</term><term>Prevalence</term><term>Severity of Illness Index</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adulte</term><term>Co-infection</term><term>Enfant</term><term>Grippe humaine</term><term>Histoire du 21ème siècle</term><term>Humains</term><term>Indice de gravité médicale</term><term>Infections bactériennes</term><term>Mortalité</term><term>Pandémies</term><term>Pneumopathie infectieuse</term><term>Prévalence</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p id="Par1">The aim of this study was to estimate the prevalence of pneumonia and secondary bacterial infections during the pandemic of influenza A(H1N1)pdm09.</p></sec><sec><title>Methods</title><p id="Par2">A systematic review was conducted to identify relevant literature in which clinical outcomes of pandemic influenza A(H1N1)pdm09 infection were described. Published studies (between 01/01/2009 and 05/07/2012) describing cases of fatal or hospitalised A(H1N1)pdm09 and including data on bacterial testing or co-infection.</p></sec><sec><title>Results</title><p id="Par3">Seventy five studies met the inclusion criteria. Fatal cases with autopsy specimen testing were reported in 11 studies, in which any co-infection was identified in 23% of cases (<italic>Streptococcus pneumoniae 29%)</italic>. Eleven studies reported bacterial co-infection among hospitalised cases of A(H1N1)2009pdm with confirmed pneumonia, with a mean of 19% positive for bacteria (<italic>Streptococcus pneumoniae 54%)</italic>. Of 16 studies of intensive care unit (ICU) patients, bacterial co-infection identified in a mean of 19% of cases (<italic>Streptococcus pneumoniae 26%)</italic>. The mean prevalence of bacterial co-infection was 12% in studies of hospitalised patients not requiring ICU (<italic>Streptococcus pneumoniae 33%)</italic> and 16% in studies of paediatric patients hospitalised in general or pediatric intensive care unit (PICU) wards (<italic>Streptococcus pneumoniae 16%)</italic>.</p></sec><sec><title>Conclusion</title><p id="Par4">We found that few studies of the 2009 influenza pandemic reported on bacterial complications and testing. Of studies which did report on this, secondary bacterial infection was identified in almost one in four patients, with <italic>Streptococcus pneumoniae</italic> the most common bacteria identified. Bacterial complications were associated with serious outcomes such as death and admission to intensive care. Prevention and treatment of bacterial secondary infection should be an integral part of pandemic planning, and improved uptake of routine pneumococcal vaccination in adults with an indication may reduce the impact of a pandemic.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Lee, Eh" uniqKey="Lee E">EH Lee</name></author><author><name sortKey="Wu, C" uniqKey="Wu C">C Wu</name></author><author><name sortKey="Lee, Eu" uniqKey="Lee E">EU Lee</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gill, Jr" uniqKey="Gill J">JR Gill</name></author><author><name sortKey="Sheng, Zm" uniqKey="Sheng Z">ZM Sheng</name></author><author><name sortKey="Ely, Sf" uniqKey="Ely S">SF Ely</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chien, Ys" uniqKey="Chien Y">YS Chien</name></author><author><name sortKey="Su, Cp" uniqKey="Su C">CP Su</name></author><author><name 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sortKey="Monteverde, E" uniqKey="Monteverde E">E Monteverde</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Randolph, Ag" uniqKey="Randolph A">AG Randolph</name></author><author><name sortKey="Vaughn, F" uniqKey="Vaughn F">F Vaughn</name></author><author><name sortKey="Sullivan, R" uniqKey="Sullivan R">R Sullivan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Shin, Sy" uniqKey="Shin S">SY Shin</name></author><author><name sortKey="Kim, Jh" uniqKey="Kim J">JH Kim</name></author><author><name sortKey="Kim, Hs" uniqKey="Kim H">HS Kim</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list></list><tree><noCountry><name sortKey="Barnes, Michelle" sort="Barnes, Michelle" uniqKey="Barnes M" first="Michelle" last="Barnes">Michelle Barnes</name><name sortKey="Chughtai, Abrar Ahmad" sort="Chughtai, Abrar Ahmad" uniqKey="Chughtai A" first="Abrar Ahmad" last="Chughtai">Abrar Ahmad Chughtai</name><name sortKey="Heywood, Anita" sort="Heywood, Anita" uniqKey="Heywood A" first="Anita" last="Heywood">Anita Heywood</name><name sortKey="Macintyre, Chandini Raina" sort="Macintyre, Chandini Raina" uniqKey="Macintyre C" first="Chandini Raina" last="Macintyre">Chandini Raina Macintyre</name><name sortKey="Ridda, Iman" sort="Ridda, Iman" uniqKey="Ridda I" first="Iman" last="Ridda">Iman Ridda</name><name sortKey="Seale, Holly" sort="Seale, Holly" uniqKey="Seale H" first="Holly" last="Seale">Holly Seale</name><name sortKey="Toms, Renin" sort="Toms, Renin" uniqKey="Toms R" first="Renin" last="Toms">Renin Toms</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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