Molecular epidemiology of a post‐influenza pandemic outbreak of acute respiratory infections in Korea caused by human adenovirus type 3
Identifieur interne : 000097 ( Istex/Corpus ); précédent : 000096; suivant : 000098Molecular epidemiology of a post‐influenza pandemic outbreak of acute respiratory infections in Korea caused by human adenovirus type 3
Auteurs : Wan-Ji Lee ; Hee-Dong Jung ; Hyang-Min Cheong ; Kisoon KimSource :
- Journal of Medical Virology [ 0146-6615 ] ; 2015-01.
Abstract
An outbreak of upper respiratory tract infections associated with human adenovirus (HAdV) occurred on a national scale in Korea from September to December 2010, following a major H1N1 influenza pandemic. Data from the Korea Influenza and Respiratory Surveillance System (KINRESS) showed an unusually high positive rate accounting for up to 20% of all diagnosed cases. To determine the principal cause of the outbreak, direct polymerase chain reaction (PCR) amplification followed by sequence analysis targeting parts of the hexon gene of HAdV was performed. Serotypes of 1,007 PCR‐diagnosed HAdV‐positive samples from patients with an acute upper respiratory tract illness were determined and epidemiological characteristics including major aged group and clinical symptoms were analyzed. The principal symptom of HAdV infections was fever and the vulnerable aged group was 1–5 years old. Based on sequence analysis, HAdV‐3 was the predominant serotype in the outbreak, with an incidence of 74.3%. From the beginning of 2010 until May, the major serotypes were HAdV‐1, 2, and 5 (70–100%) in any given period. However, an outbreak dominated by HAdV‐3 started between July and August and peaked in September. Phylogenetic analysis revealed that there was no genetic variation in HAdV‐3. The results demonstrated that an outbreak of upper respiratory illness followed by H1N1 influenza pandemic in Korea was caused mainly by emerged HAdV‐3. J. Med. Virol. 87: 10–17, 2015. © 2014 Wiley Periodicals, Inc.
Url:
DOI: 10.1002/jmv.23984
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<front><div type="abstract">An outbreak of upper respiratory tract infections associated with human adenovirus (HAdV) occurred on a national scale in Korea from September to December 2010, following a major H1N1 influenza pandemic. Data from the Korea Influenza and Respiratory Surveillance System (KINRESS) showed an unusually high positive rate accounting for up to 20% of all diagnosed cases. To determine the principal cause of the outbreak, direct polymerase chain reaction (PCR) amplification followed by sequence analysis targeting parts of the hexon gene of HAdV was performed. Serotypes of 1,007 PCR‐diagnosed HAdV‐positive samples from patients with an acute upper respiratory tract illness were determined and epidemiological characteristics including major aged group and clinical symptoms were analyzed. The principal symptom of HAdV infections was fever and the vulnerable aged group was 1–5 years old. Based on sequence analysis, HAdV‐3 was the predominant serotype in the outbreak, with an incidence of 74.3%. From the beginning of 2010 until May, the major serotypes were HAdV‐1, 2, and 5 (70–100%) in any given period. However, an outbreak dominated by HAdV‐3 started between July and August and peaked in September. Phylogenetic analysis revealed that there was no genetic variation in HAdV‐3. The results demonstrated that an outbreak of upper respiratory illness followed by H1N1 influenza pandemic in Korea was caused mainly by emerged HAdV‐3. J. Med. Virol. 87: 10–17, 2015. © 2014 Wiley Periodicals, Inc.</div>
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<profileDesc><abstract style="main"><p>An outbreak of upper respiratory tract infections associated with human adenovirus (HAdV) occurred on a national scale in Korea from September to December 2010, following a major H1N1 influenza pandemic. Data from the Korea Influenza and Respiratory Surveillance System (KINRESS) showed an unusually high positive rate accounting for up to 20% of all diagnosed cases. To determine the principal cause of the outbreak, direct polymerase chain reaction (PCR) amplification followed by sequence analysis targeting parts of the <hi rend="italic">hexon</hi>
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<contentMeta><titleGroup><title type="main">Molecular epidemiology of a post‐influenza pandemic outbreak of acute respiratory infections in Korea caused by human adenovirus type 3</title>
<title type="short">Post‐Influenza Pandemic Outbreak of Human Adenovirus Type 3</title>
<title type="shortAuthors">Lee et al</title>
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<affiliationGroup><affiliation xml:id="jmv23984-aff-0001" countryCode="KR"><orgDiv>Division of Respiratory Viruses, Center for Infectious Diseases, Korea National Institute of Health</orgDiv>
<orgName>Korea Centers for Disease Control and Prevention</orgName>
<address><city>Chungbuk‐do</city>
<countryPart>CheongWon‐gun</countryPart>
<country>Korea</country>
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<keyword xml:id="jmv23984-kwd-0002">molecular epidemiology</keyword>
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<fundingNumber>4800‐4851‐300</fundingNumber>
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<caption><b>Table SI</b>
. Accession Number of Reference: HAdV Sequences</caption>
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<abstractGroup><abstract type="main"><section xml:id="jmv23984-sec-0001"><p>An outbreak of upper respiratory tract infections associated with human adenovirus (HAdV) occurred on a national scale in Korea from September to December 2010, following a major H1N1 influenza pandemic. Data from the Korea Influenza and Respiratory Surveillance System (KINRESS) showed an unusually high positive rate accounting for up to 20% of all diagnosed cases. To determine the principal cause of the outbreak, direct polymerase chain reaction (PCR) amplification followed by sequence analysis targeting parts of the <i>hexon</i>
gene of HAdV was performed. Serotypes of 1,007 PCR‐diagnosed HAdV‐positive samples from patients with an acute upper respiratory tract illness were determined and epidemiological characteristics including major aged group and clinical symptoms were analyzed. The principal symptom of HAdV infections was fever and the vulnerable aged group was 1–5 years old. Based on sequence analysis, HAdV‐3 was the predominant serotype in the outbreak, with an incidence of 74.3%. From the beginning of 2010 until May, the major serotypes were HAdV‐1, 2, and 5 (70–100%) in any given period. However, an outbreak dominated by HAdV‐3 started between July and August and peaked in September. Phylogenetic analysis revealed that there was no genetic variation in HAdV‐3. The results demonstrated that an outbreak of upper respiratory illness followed by H1N1 influenza pandemic in Korea was caused mainly by emerged HAdV‐3. <b><i>J. Med. Virol. 87: 10–17, 2015</i>
.</b>
© 2014 Wiley Periodicals, Inc.</p>
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<noteGroup><note xml:id="jmv23984-note-0001" numbered="no">The authors declare no conflict of interest.</note>
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<mods version="3.6"><titleInfo lang="en"><title>Molecular epidemiology of a post‐influenza pandemic outbreak of acute respiratory infections in Korea caused by human adenovirus type 3</title>
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<titleInfo type="abbreviated" lang="en"><title>Post‐Influenza Pandemic Outbreak of Human Adenovirus Type 3</title>
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<titleInfo type="alternative" contentType="CDATA" lang="en"><title>Molecular epidemiology of a post‐influenza pandemic outbreak of acute respiratory infections in Korea caused by human adenovirus type 3</title>
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<name type="personal"><namePart type="given">Wan‐Ji</namePart>
<namePart type="family">Lee</namePart>
<affiliation>Division of Respiratory Viruses, Center for Infectious Diseases, Korea National Institute of Health, Korea Centers for Disease Control and Prevention, CheongWon‐gun, Chungbuk‐do, Korea</affiliation>
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<name type="personal"><namePart type="given">Hyang‐Min</namePart>
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<name type="personal"><namePart type="given">Kisoon</namePart>
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<affiliation>Division of Respiratory Viruses, Center for Infectious Diseases, Korea National Institute of Health, Korea Centers for Disease Control and Prevention, CheongWon‐gun, Chungbuk‐do, Korea</affiliation>
<affiliation>Correspondence to: Kisoon Kim, Division of Respiraotry Viruses, Center for Infectious Diseases, Korea National Institute of Health, Korea Centers for Disease Control and Prevention, OHTAC, Chung‐buk‐do 363‐951, Korea.E‐mail:</affiliation>
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<dateIssued encoding="w3cdtf">2015-01</dateIssued>
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<abstract>An outbreak of upper respiratory tract infections associated with human adenovirus (HAdV) occurred on a national scale in Korea from September to December 2010, following a major H1N1 influenza pandemic. Data from the Korea Influenza and Respiratory Surveillance System (KINRESS) showed an unusually high positive rate accounting for up to 20% of all diagnosed cases. To determine the principal cause of the outbreak, direct polymerase chain reaction (PCR) amplification followed by sequence analysis targeting parts of the hexon gene of HAdV was performed. Serotypes of 1,007 PCR‐diagnosed HAdV‐positive samples from patients with an acute upper respiratory tract illness were determined and epidemiological characteristics including major aged group and clinical symptoms were analyzed. The principal symptom of HAdV infections was fever and the vulnerable aged group was 1–5 years old. Based on sequence analysis, HAdV‐3 was the predominant serotype in the outbreak, with an incidence of 74.3%. From the beginning of 2010 until May, the major serotypes were HAdV‐1, 2, and 5 (70–100%) in any given period. However, an outbreak dominated by HAdV‐3 started between July and August and peaked in September. Phylogenetic analysis revealed that there was no genetic variation in HAdV‐3. The results demonstrated that an outbreak of upper respiratory illness followed by H1N1 influenza pandemic in Korea was caused mainly by emerged HAdV‐3. J. Med. Virol. 87: 10–17, 2015. © 2014 Wiley Periodicals, Inc.</abstract>
<note type="funding">Korea National Institute Health - No. 4800‐4851‐300; </note>
<subject lang="en"><genre>keywords</genre>
<topic>human adenovirus</topic>
<topic>molecular epidemiology</topic>
<topic>post‐pandemic outbreak</topic>
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<titleInfo type="abbreviated"><title>J. Med. Virol.</title>
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<note type="content"> Additional supporting information may be found in the online version of this article at the publisher's web‐site.Supporting Info Item: Table SI. Accession Number of Reference: HAdV Sequences - </note>
<subject><genre>article-category</genre>
<topic>Research Article</topic>
<topic>Research Articles</topic>
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<identifier type="ISSN">0146-6615</identifier>
<identifier type="eISSN">1096-9071</identifier>
<identifier type="DOI">10.1002/(ISSN)1096-9071</identifier>
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