PandemieGrippaleV1, Hal, Curation, bibRecord, 000256

Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.

Identifieur interne : 000256 ( Hal/Curation ); précédent : 000255; suivant : 000257

Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.

Auteurs : Mariette Ducatez [États-Unis] ; S. Sonnberg [États-Unis] ; R J Hall [Nouvelle-Zélande] ; M. Peacey [Nouvelle-Zélande] ; J. Ralston [Nouvelle-Zélande] ; Richard J. Webby [États-Unis] ; Q S Huang [Nouvelle-Zélande]

Source :

Journal of Virological Methods [ 0166-0934 ] ; 2010.

RBID : Hal:hal-02662704

Abstract

New Zealand identified its first pandemic H1N1 influenza cases in late April 2009, immediately prior to the historical start of the New Zealand influenza season. Both pandemic and oseltamivir-resistant seasonal H1N1 viruses cocirculated in the population for a period of time. Thus, concerns were raised about the possibility of reassortment events between the two strains. An RT-PCR-based genotyping assay was developed so that H1N1 influenza coinfections and reassortants could be detected quickly. The assay differentiated effectively the seasonal and pandemic strains. It also confirmed the identification of the first reported coinfection of pandemic and seasonal H1N1 strains during the 2009 Southern Hemisphere influenza season in New Zealand.

Url:

https://hal.inrae.fr/hal-02662704

DOI: 10.1016/j.jviromet.2010.04.020

Links toward previous steps (curation, corpus...)

to stream Hal, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000256

Links to Exploration step

Hal:hal-02662704

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.</title>
<author><name sortKey="Ducatez, Mariette" sort="Ducatez, Mariette" uniqKey="Ducatez M" first="Mariette" last="Ducatez">Mariette Ducatez</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-164402" status="INCOMING">          <orgName>Department of Infectious Diseases</orgName>
          <desc>            <address>              <addrLine>Division of Virology Memphis - TN 38105</addrLine>
              <country key="US"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-489322" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-489322" type="direct"><org type="institution" xml:id="struct-489322" status="VALID">          <orgName>St Jude Children's Research Hospital</orgName>
          <desc>            <address>              <addrLine>Memphis, TN 38105-3678</addrLine>
              <country key="US"></country>
            </address>
            <ref type="url">https://www.stjude.org/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>États-Unis</country>
</affiliation>
</author>
<author><name sortKey="Sonnberg, S" sort="Sonnberg, S" uniqKey="Sonnberg S" first="S" last="Sonnberg">S. Sonnberg</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-164402" status="INCOMING">          <orgName>Department of Infectious Diseases</orgName>
          <desc>            <address>              <addrLine>Division of Virology Memphis - TN 38105</addrLine>
              <country key="US"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-489322" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-489322" type="direct"><org type="institution" xml:id="struct-489322" status="VALID">          <orgName>St Jude Children's Research Hospital</orgName>
          <desc>            <address>              <addrLine>Memphis, TN 38105-3678</addrLine>
              <country key="US"></country>
            </address>
            <ref type="url">https://www.stjude.org/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>États-Unis</country>
</affiliation>
</author>
<author><name sortKey="Hall, R J" sort="Hall, R J" uniqKey="Hall R" first="R J" last="Hall">R J Hall</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
<author><name sortKey="Peacey, M" sort="Peacey, M" uniqKey="Peacey M" first="M" last="Peacey">M. Peacey</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
<author><name sortKey="Ralston, J" sort="Ralston, J" uniqKey="Ralston J" first="J" last="Ralston">J. Ralston</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
<author><name sortKey="Webby, Richard J" sort="Webby, Richard J" uniqKey="Webby R" first="Richard J." last="Webby">Richard J. Webby</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-164402" status="INCOMING">          <orgName>Department of Infectious Diseases</orgName>
          <desc>            <address>              <addrLine>Division of Virology Memphis - TN 38105</addrLine>
              <country key="US"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-489322" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-489322" type="direct"><org type="institution" xml:id="struct-489322" status="VALID">          <orgName>St Jude Children's Research Hospital</orgName>
          <desc>            <address>              <addrLine>Memphis, TN 38105-3678</addrLine>
              <country key="US"></country>
            </address>
            <ref type="url">https://www.stjude.org/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>États-Unis</country>
</affiliation>
</author>
<author><name sortKey="Huang, Q S" sort="Huang, Q S" uniqKey="Huang Q" first="Q S" last="Huang">Q S Huang</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">HAL</idno>
<idno type="RBID">Hal:hal-02662704</idno>
<idno type="halId">hal-02662704</idno>
<idno type="halUri">https://hal.inrae.fr/hal-02662704</idno>
<idno type="url">https://hal.inrae.fr/hal-02662704</idno>
<idno type="doi">10.1016/j.jviromet.2010.04.020</idno>
<date when="2010">2010</date>
<idno type="wicri:Area/Hal/Corpus">000256</idno>
<idno type="wicri:Area/Hal/Curation">000256</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.</title>
<author><name sortKey="Ducatez, Mariette" sort="Ducatez, Mariette" uniqKey="Ducatez M" first="Mariette" last="Ducatez">Mariette Ducatez</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-164402" status="INCOMING">          <orgName>Department of Infectious Diseases</orgName>
          <desc>            <address>              <addrLine>Division of Virology Memphis - TN 38105</addrLine>
              <country key="US"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-489322" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-489322" type="direct"><org type="institution" xml:id="struct-489322" status="VALID">          <orgName>St Jude Children's Research Hospital</orgName>
          <desc>            <address>              <addrLine>Memphis, TN 38105-3678</addrLine>
              <country key="US"></country>
            </address>
            <ref type="url">https://www.stjude.org/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>États-Unis</country>
</affiliation>
</author>
<author><name sortKey="Sonnberg, S" sort="Sonnberg, S" uniqKey="Sonnberg S" first="S" last="Sonnberg">S. Sonnberg</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-164402" status="INCOMING">          <orgName>Department of Infectious Diseases</orgName>
          <desc>            <address>              <addrLine>Division of Virology Memphis - TN 38105</addrLine>
              <country key="US"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-489322" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-489322" type="direct"><org type="institution" xml:id="struct-489322" status="VALID">          <orgName>St Jude Children's Research Hospital</orgName>
          <desc>            <address>              <addrLine>Memphis, TN 38105-3678</addrLine>
              <country key="US"></country>
            </address>
            <ref type="url">https://www.stjude.org/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>États-Unis</country>
</affiliation>
</author>
<author><name sortKey="Hall, R J" sort="Hall, R J" uniqKey="Hall R" first="R J" last="Hall">R J Hall</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
<author><name sortKey="Peacey, M" sort="Peacey, M" uniqKey="Peacey M" first="M" last="Peacey">M. Peacey</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
<author><name sortKey="Ralston, J" sort="Ralston, J" uniqKey="Ralston J" first="J" last="Ralston">J. Ralston</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
<author><name sortKey="Webby, Richard J" sort="Webby, Richard J" uniqKey="Webby R" first="Richard J." last="Webby">Richard J. Webby</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-164402" status="INCOMING">          <orgName>Department of Infectious Diseases</orgName>
          <desc>            <address>              <addrLine>Division of Virology Memphis - TN 38105</addrLine>
              <country key="US"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-489322" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-489322" type="direct"><org type="institution" xml:id="struct-489322" status="VALID">          <orgName>St Jude Children's Research Hospital</orgName>
          <desc>            <address>              <addrLine>Memphis, TN 38105-3678</addrLine>
              <country key="US"></country>
            </address>
            <ref type="url">https://www.stjude.org/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>États-Unis</country>
</affiliation>
</author>
<author><name sortKey="Huang, Q S" sort="Huang, Q S" uniqKey="Huang Q" first="Q S" last="Huang">Q S Huang</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-1032511" status="INCOMING">          <orgName>National Centre for Biosecurity and Infectious Disease</orgName>
          <desc>            <address>              <country key="NZ"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-1031275" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-1031275" type="direct"><org type="regroupinstitution" xml:id="struct-1031275" status="INCOMING">          <orgName>Partenaires INRAE</orgName>
          <desc>            <address>              <addrLine>Cette structure regroupe l'ensemble des structures créées pour la reprise des données ProdInra </addrLine>
              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Nouvelle-Zélande</country>
</affiliation>
</author>
</analytic>
<idno type="DOI">10.1016/j.jviromet.2010.04.020</idno>
<series><title level="j">Journal of Virological Methods</title>
<idno type="ISSN">0166-0934</idno>
<imprint><date type="datePub">2010</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">              <p>New Zealand identified its first pandemic H1N1 influenza cases in late April 2009, immediately prior to the historical start of the New Zealand influenza season. Both pandemic and oseltamivir-resistant seasonal H1N1 viruses cocirculated in the population for a period of time. Thus, concerns were raised about the possibility of reassortment events between the two strains. An RT-PCR-based genotyping assay was developed so that H1N1 influenza coinfections and reassortants could be detected quickly. The assay differentiated effectively the seasonal and pandemic strains. It also confirmed the identification of the first reported coinfection of pandemic and seasonal H1N1 strains during the 2009 Southern Hemisphere influenza season in New Zealand.</p>
            </div>
</front>
</TEI>
<hal api="V3">          <titleStmt>            <title xml:lang="en">Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.</title>
            <author role="aut">              <persName>                <forename type="first">Mariette</forename>
                <surname>Ducatez</surname>
              </persName>
              <email type="md5">dccdbf35fb6826cb7f117ebbae3afd75</email>
              <email type="domain">envt.fr</email>
              <idno type="halauthorid">1205717</idno>
              <affiliation ref="#struct-164402"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">S</forename>
                <surname>Sonnberg</surname>
              </persName>
              <idno type="halauthorid">11896040</idno>
              <affiliation ref="#struct-164402"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">R J</forename>
                <surname>Hall</surname>
              </persName>
              <idno type="halauthorid">11896041</idno>
              <affiliation ref="#struct-1032511"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">M</forename>
                <surname>Peacey</surname>
              </persName>
              <idno type="halauthorid">11896042</idno>
              <affiliation ref="#struct-1032511"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">J</forename>
                <surname>Ralston</surname>
              </persName>
              <idno type="halauthorid">11896043</idno>
              <affiliation ref="#struct-1032511"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">Richard J.</forename>
                <surname>Webby</surname>
              </persName>
              <idno type="halauthorid">632328</idno>
              <affiliation ref="#struct-164402"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">Q S</forename>
                <surname>Huang</surname>
              </persName>
              <idno type="halauthorid">11896044</idno>
              <affiliation ref="#struct-1032511"></affiliation>
            </author>
            <editor role="depositor">              <persName>                <forename>Migration</forename>
                <surname>ProdInra</surname>
              </persName>
              <email type="md5">9e5ed7d56b52b3d4383123b1ffb42236</email>
              <email type="domain">inrae.fr</email>
            </editor>
          </titleStmt>
          <editionStmt>            <edition n="v1" type="current">              <date type="whenSubmitted">2020-05-31 00:59:56</date>
              <date type="whenModified">2020-05-31 03:04:00</date>
              <date type="whenReleased">2020-05-31 00:59:56</date>
              <date type="whenProduced">2010</date>
              <fs>                <f name="inra_publicVise_local" notation="string">                  <string>inra_publicVise_local_SC</string>
                </f>
                <f name="inra_publicVise_local" notation="numeric">                  <numeric>SC</numeric>
                </f>
              </fs>
              <ref type="externalLink" target="http://europepmc.org/articles/pmc2910119?pdf=render"></ref>
            </edition>
            <respStmt>              <resp>contributor</resp>
              <name key="888556">                <persName>                  <forename>Migration</forename>
                  <surname>ProdInra</surname>
                </persName>
                <email type="md5">9e5ed7d56b52b3d4383123b1ffb42236</email>
                <email type="domain">inrae.fr</email>
              </name>
            </respStmt>
          </editionStmt>
          <publicationStmt>            <distributor>CCSD</distributor>
            <idno type="halId">hal-02662704</idno>
            <idno type="halUri">https://hal.inrae.fr/hal-02662704</idno>
            <idno type="halBibtex">ducatez:hal-02662704</idno>
            <idno type="halRefHtml">Journal of Virological Methods, Elsevier, 2010, 168 (1-2), pp.78-81. ⟨10.1016/j.jviromet.2010.04.020⟩</idno>
            <idno type="halRef">Journal of Virological Methods, Elsevier, 2010, 168 (1-2), pp.78-81. ⟨10.1016/j.jviromet.2010.04.020⟩</idno>
          </publicationStmt>
          <seriesStmt>            <idno type="stamp" n="INRAE">Institut National de Recherche en Agriculture, Alimentation et Environnement</idno>
            <idno type="stamp" n="SANTE_PUB_INSERM" corresp="INSERM">Santé Publique à l'Inserm</idno>
          </seriesStmt>
          <notesStmt>            <note type="popular" n="0">No</note>
            <note type="peer" n="1">Yes</note>
          </notesStmt>
          <sourceDesc>            <biblStruct>              <analytic>                <title xml:lang="en">Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.</title>
                <author role="aut">                  <persName>                    <forename type="first">Mariette</forename>
                    <surname>Ducatez</surname>
                  </persName>
                  <email type="md5">dccdbf35fb6826cb7f117ebbae3afd75</email>
                  <email type="domain">envt.fr</email>
                  <idno type="halauthorid">1205717</idno>
                  <affiliation ref="#struct-164402"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">S</forename>
                    <surname>Sonnberg</surname>
                  </persName>
                  <idno type="halauthorid">11896040</idno>
                  <affiliation ref="#struct-164402"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">R J</forename>
                    <surname>Hall</surname>
                  </persName>
                  <idno type="halauthorid">11896041</idno>
                  <affiliation ref="#struct-1032511"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">M</forename>
                    <surname>Peacey</surname>
                  </persName>
                  <idno type="halauthorid">11896042</idno>
                  <affiliation ref="#struct-1032511"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">J</forename>
                    <surname>Ralston</surname>
                  </persName>
                  <idno type="halauthorid">11896043</idno>
                  <affiliation ref="#struct-1032511"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">Richard J.</forename>
                    <surname>Webby</surname>
                  </persName>
                  <idno type="halauthorid">632328</idno>
                  <affiliation ref="#struct-164402"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">Q S</forename>
                    <surname>Huang</surname>
                  </persName>
                  <idno type="halauthorid">11896044</idno>
                  <affiliation ref="#struct-1032511"></affiliation>
                </author>
              </analytic>
              <monogr>                <idno type="halJournalId" status="VALID">16476</idno>
                <idno type="issn">0166-0934</idno>
                <title level="j">Journal of Virological Methods</title>
                <imprint>                  <publisher>Elsevier</publisher>
                  <biblScope unit="volume">168</biblScope>
                  <biblScope unit="issue">1-2</biblScope>
                  <biblScope unit="pp">78-81</biblScope>
                  <date type="datePub">2010</date>
                </imprint>
              </monogr>
              <idno type="doi">10.1016/j.jviromet.2010.04.020</idno>
              <idno type="prodinra">178210</idno>
              <idno type="pubmed">20435067</idno>
              <idno type="wos">000280869400013</idno>
              <ref type="seeAlso" target="http://www.journals.elsevier.com/journal-of-virological-methods">http://www.journals.elsevier.com/journal-of-virological-methods</ref>
              <ref type="publisher">http://www.journals.elsevier.com/journal-of-virological-methods</ref>
            </biblStruct>
          </sourceDesc>
          <profileDesc>            <langUsage>              <language ident="en">English</language>
            </langUsage>
            <textClass>              <classCode scheme="halDomain" n="sdv.spee">Life Sciences [q-bio]/Santé publique et épidémiologie</classCode>
              <classCode scheme="halDomain" n="sdv.mp">Life Sciences [q-bio]/Microbiology and Parasitology</classCode>
              <classCode scheme="halDomain" n="sdv.mhep">Life Sciences [q-bio]/Human health and pathology</classCode>
              <classCode scheme="halTypology" n="ART">Journal articles</classCode>
            </textClass>
            <abstract xml:lang="en">              <p>New Zealand identified its first pandemic H1N1 influenza cases in late April 2009, immediately prior to the historical start of the New Zealand influenza season. Both pandemic and oseltamivir-resistant seasonal H1N1 viruses cocirculated in the population for a period of time. Thus, concerns were raised about the possibility of reassortment events between the two strains. An RT-PCR-based genotyping assay was developed so that H1N1 influenza coinfections and reassortants could be detected quickly. The assay differentiated effectively the seasonal and pandemic strains. It also confirmed the identification of the first reported coinfection of pandemic and seasonal H1N1 strains during the 2009 Southern Hemisphere influenza season in New Zealand.</p>
            </abstract>
          </profileDesc>
        </hal>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/PandemieGrippaleV1/Data/Hal/Curation

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000256 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Hal/Curation/biblio.hfd -nk 000256 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    PandemieGrippaleV1
   |flux=    Hal
   |étape=   Curation
   |type=    RBID
   |clé=     Hal:hal-02662704
   |texte=   Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.
}}

This area was generated with Dilib version V0.6.34.
Data generation: Wed Jun 10 11:04:28 2020. Site generation: Sun Mar 28 09:10:28 2021

	Serveur d'exploration sur les pandémies grippales
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur les pandémies grippales

Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.

Genotyping assay for the identification of 2009-2010 pandemic and seasonal H1N1 influenza virus reassortants.

Source :

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri