Sequence Analysis < Sequence Analysis, DNA < Sequence Analysis, Protein

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List of bibliographic references

Number of relevant bibliographic references: 240.
[0-20] [0 - 20][0 - 50][20-40]

Ident.	Authors (with country if any)	Title
000256 (2020)	Avinash Premraj [Émirats arabes unis] ; Abi George Aleyas [Émirats arabes unis] ; Binita Nautiyal [Émirats arabes unis] ; Thaha Jamal Rasool [Émirats arabes unis]	Camelid type I interferons: Identification and functional characterization of interferon alpha from the dromedary camel (Camelus dromedarius).
000495 (2019)	Akio Miyao [Japon] ; Jianyu Song Kiyomiya [Japon] ; Keiko Iida [Japon] ; Koji Doi [Japon] ; Hiroshi Yasue [Japon]	Polymorphic edge detection (PED): two efficient methods of polymorphism detection from next-generation sequencing data.
000513 (2019)	Nathan Lapierre [États-Unis] ; Serghei Mangul [États-Unis] ; Mohammed Alser [Suisse] ; Igor Mandric [États-Unis] ; Nicholas C. Wu [États-Unis] ; David Koslicki [États-Unis] ; Eleazar Eskin [États-Unis]	MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples.
000531 (2019)	Katarzyna Wreczycka [Allemagne] ; Vedran Franke [Allemagne] ; Bora Uyar [Allemagne] ; Ricardo Wurmus [Allemagne] ; Selman Bulut [Allemagne] ; Baris Tursun [Allemagne] ; Altuna Akalin [Allemagne]	HOT or not: examining the basis of high-occupancy target regions.
000541 (2019)	Xiaolong Zhang [République populaire de Chine] ; Yanyan Shao [République populaire de Chine] ; Jichao Tian [République populaire de Chine] ; Yuwei Liao [République populaire de Chine] ; Peiying Li [République populaire de Chine] ; Yu Zhang [République populaire de Chine] ; Jun Chen [République populaire de Chine] ; Zhiguang Li [République populaire de Chine]	pTrimmer: An efficient tool to trim primers of multiplex deep sequencing data.
000577 (2019)	Kui Hua [République populaire de Chine] ; Xuegong Zhang [République populaire de Chine]	Estimating the total genome length of a metagenomic sample using k-mers.
000597 (2019)	Nicolas Denancé [France] ; Martial Briand [France] ; Romain Gaborieau [France] ; Sylvain Gaillard [France] ; Marie-Agnès Jacques [France]	Identification of genetic relationships and subspecies signatures in Xylella fastidiosa.
000610 (2019)	Will Pm Rowe [Royaume-Uni] ; Anna Paola Carrieri [Royaume-Uni] ; Cristina Alcon-Giner [Royaume-Uni] ; Shabhonam Caim [Royaume-Uni] ; Alex Shaw [Royaume-Uni] ; Kathleen Sim [Royaume-Uni] ; J Simon Kroll [Royaume-Uni] ; Lindsay J. Hall [Royaume-Uni] ; Edward O. Pyzer-Knapp [Royaume-Uni] ; Martyn D. Winn [Royaume-Uni]	Streaming histogram sketching for rapid microbiome analytics.
000667 (2019)	Akshay Tambe [États-Unis] ; Lior Pachter [États-Unis]	Barcode identification for single cell genomics.
000678 (2019)	Wentian Li [États-Unis] ; Jerome Freudenberg [États-Unis] ; Jan Freudenberg [États-Unis]	Alignment-free approaches for predicting novel Nuclear Mitochondrial Segments (NUMTs) in the human genome.
000731 (2019)	Roberta Lecis [Italie] ; Mauro Mucedda [Italie] ; Ermanno Pidinchedda [Italie] ; Marco Pittau [Italie] ; Alberto Alberti [Italie]	Molecular identification of Betacoronavirus in bats from Sardinia (Italy): first detection and phylogeny.
000735 (2018)	Magali Jaillard [France] ; Leandro Lima [France] ; Maud Tournoud [France] ; Pierre Mahé [France] ; Alex Van Belkum [France] ; Vincent Lacroix [France] ; Laurent Jacob [France]	A fast and agnostic method for bacterial genome-wide association studies: Bridging the gap between k-mers and genetic events.
000746 (2018)	Chong Chu [États-Unis] ; Jingwen Pei [États-Unis] ; Yufeng Wu [États-Unis]	An improved approach for reconstructing consensus repeats from short sequence reads.
000750 (2018)	Erki Aun [Estonie] ; Age Brauer [Estonie] ; Veljo Kisand [Estonie] ; Tanel Tenson [Estonie] ; Maido Remm [Estonie]	A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria.
000751 (2018)	Swati C. Manekar [Inde] ; Shailesh R. Sathe [Inde]	A benchmark study of k-mer counting methods for high-throughput sequencing.
000754 (2018)	Md Rafsan Jani [Bangladesh] ; Md Toha Khan Mozlish [Bangladesh] ; Sajid Ahmed [Bangladesh] ; Niger Sultana Tahniat [Bangladesh] ; Dewan Md Farid [Bangladesh] ; Swakkhar Shatabda [Bangladesh]	iRecSpot-EF: Effective sequence based features for recombination hotspot prediction.
000806 (2018)	Yaron Orenstein [Israël] ; Yun William Yu [États-Unis] ; Bonnie Berger [États-Unis]	Joker de Bruijn: Covering k-Mers Using Joker Characters.
000830 (2018)	Kévin Vervier [États-Unis] ; Pierre Mahé [France] ; Jean-Philippe Vert [France]	MetaVW: Large-Scale Machine Learning for Metagenomics Sequence Classification.
000848 (2018)	Han Li [États-Unis] ; Fengzhu Sun [États-Unis]	Comparative studies of alignment, alignment-free and SVM based approaches for predicting the hosts of viruses based on viral sequences.
000858 (2019)	Md Abdullah Al Maruf [Bangladesh] ; Swakkhar Shatabda [Bangladesh]	iRSpot-SF: Prediction of recombination hotspots by incorporating sequence based features into Chou's Pseudo components.
000863 (2018)	Jonas Andreas Sibbesen [Danemark] ; Lasse Maretty [Danemark] ; Anders Krogh [Danemark]	Accurate genotyping across variant classes and lengths using variant graphs.

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