MersV1, PubMed, Curation, bibRecord, 002216

Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.

Identifieur interne : 002216 ( PubMed/Curation ); précédent : 002215; suivant : 002217

Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.

Auteurs : Sheng Kai Tung [Belgique] ; Lee Jene Teng ; Mario Vaneechoutte ; Hung Mo Chen ; Tsung Chain Chang

Source :

Journal of clinical microbiology [ 0095-1137 ] ; 2006.

RBID : pubmed:17065265

Descripteurs français

English descriptors

KwdEn :
- Bacteriological Techniques, Blood (microbiology), DNA, Bacterial (chemistry), DNA, Bacterial (genetics), DNA, Ribosomal Spacer (genetics), Enterococcus (classification), Enterococcus (genetics), Enterococcus (isolation & purification), Gram-Positive Bacteria (classification), Gram-Positive Bacteria (genetics), Gram-Positive Bacteria (isolation & purification), Gram-Positive Bacterial Infections (microbiology), Humans, Molecular Sequence Data, Nucleic Acid Hybridization, Oligonucleotide Array Sequence Analysis, Oligonucleotide Probes, Polymerase Chain Reaction, Sensitivity and Specificity, Sequence Analysis, DNA, Streptococcus (classification), Streptococcus (genetics), Streptococcus (isolation & purification).
MESH :
- chemical , chemistry : DNA, Bacterial.
- chemical , genetics : DNA, Bacterial, DNA, Ribosomal Spacer.
- classification : Enterococcus, Gram-Positive Bacteria, Streptococcus.
- genetics : Enterococcus, Gram-Positive Bacteria, Streptococcus.
- isolation & purification : Enterococcus, Gram-Positive Bacteria, Streptococcus.
- microbiology : Blood, Gram-Positive Bacterial Infections.
- Bacteriological Techniques, Humans, Molecular Sequence Data, Nucleic Acid Hybridization, Oligonucleotide Array Sequence Analysis, Oligonucleotide Probes, Polymerase Chain Reaction, Sensitivity and Specificity, Sequence Analysis, DNA.

Abstract

Some species of enterococci and streptococci are difficult to differentiate by phenotypic traits. The feasibility of using an oligonucleotide array for identification of 11 viridans group streptococci was previously established. The aim of this study was to expand the array to identify species of Abiotrophia (1 species), Enterococcus (18 species), Granulicatella (3 species), and Streptococcus (31 species and 6 subspecies). The method consisted of PCR amplification of the ribosomal DNA intergenic spacer (ITS) regions, followed by hybridization of the digoxigenin-labeled PCR products to a panel of oligonucleotide probes (16- to 30-mers) immobilized on a nylon membrane. Probes could be divided into three categories: species specific, group specific, and supplemental probes. All probes were designed either from the ITS regions or from the 3' ends of the 16S rRNA genes. A collection of 312 target strains (162 reference strains and 150 clinical isolates) and 73 nontarget strains was identified by the array. Most clinical isolates were isolated from blood cultures or deep abscesses, and only those strains having excellent species identification with the Rapid ID 32 STREP system (bioMérieux Vitek, Taipei, Taiwan) were used for array testing. The test sensitivity and specificity of the array were 100% (312/312) and 98.6% (72/73), respectively. The whole procedure of array hybridization took about 8 h, starting from isolated colonies, and the hybridization patterns could be read by the naked eye. The oligonucleotide array is accurate for identification of the above microorganisms and could be used as a reliable alternative to phenotypic identification methods.

DOI: 10.1128/JCM.01712-06
PubMed: 17065265

Links toward previous steps (curation, corpus...)

to stream PubMed, to step Corpus: Pour aller vers cette notice dans l'étape Curation :002216

Links to Exploration step

pubmed:17065265

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.</title>
<author><name sortKey="Tung, Sheng Kai" sort="Tung, Sheng Kai" uniqKey="Tung S" first="Sheng Kai" last="Tung">Sheng Kai Tung</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Medical Laboratory Science and Biotechnology, School of Medicine, National Cheng Kung University, Tainan, Taiwan, Republic of China, and Department of Clinical Chemistry, Microbiology and Immunology, Ghent University Hospital, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Medical Laboratory Science and Biotechnology, School of Medicine, National Cheng Kung University, Tainan, Taiwan, Republic of China, and Department of Clinical Chemistry, Microbiology and Immunology, Ghent University Hospital</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Teng, Lee Jene" sort="Teng, Lee Jene" uniqKey="Teng L" first="Lee Jene" last="Teng">Lee Jene Teng</name>
</author>
<author><name sortKey="Vaneechoutte, Mario" sort="Vaneechoutte, Mario" uniqKey="Vaneechoutte M" first="Mario" last="Vaneechoutte">Mario Vaneechoutte</name>
</author>
<author><name sortKey="Chen, Hung Mo" sort="Chen, Hung Mo" uniqKey="Chen H" first="Hung Mo" last="Chen">Hung Mo Chen</name>
</author>
<author><name sortKey="Chang, Tsung Chain" sort="Chang, Tsung Chain" uniqKey="Chang T" first="Tsung Chain" last="Chang">Tsung Chain Chang</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2006">2006</date>
<idno type="RBID">pubmed:17065265</idno>
<idno type="pmid">17065265</idno>
<idno type="doi">10.1128/JCM.01712-06</idno>
<idno type="wicri:Area/PubMed/Corpus">002216</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002216</idno>
<idno type="wicri:Area/PubMed/Curation">002216</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002216</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.</title>
<author><name sortKey="Tung, Sheng Kai" sort="Tung, Sheng Kai" uniqKey="Tung S" first="Sheng Kai" last="Tung">Sheng Kai Tung</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Medical Laboratory Science and Biotechnology, School of Medicine, National Cheng Kung University, Tainan, Taiwan, Republic of China, and Department of Clinical Chemistry, Microbiology and Immunology, Ghent University Hospital, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Medical Laboratory Science and Biotechnology, School of Medicine, National Cheng Kung University, Tainan, Taiwan, Republic of China, and Department of Clinical Chemistry, Microbiology and Immunology, Ghent University Hospital</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Teng, Lee Jene" sort="Teng, Lee Jene" uniqKey="Teng L" first="Lee Jene" last="Teng">Lee Jene Teng</name>
</author>
<author><name sortKey="Vaneechoutte, Mario" sort="Vaneechoutte, Mario" uniqKey="Vaneechoutte M" first="Mario" last="Vaneechoutte">Mario Vaneechoutte</name>
</author>
<author><name sortKey="Chen, Hung Mo" sort="Chen, Hung Mo" uniqKey="Chen H" first="Hung Mo" last="Chen">Hung Mo Chen</name>
</author>
<author><name sortKey="Chang, Tsung Chain" sort="Chang, Tsung Chain" uniqKey="Chang T" first="Tsung Chain" last="Chang">Tsung Chain Chang</name>
</author>
</analytic>
<series><title level="j">Journal of clinical microbiology</title>
<idno type="ISSN">0095-1137</idno>
<imprint><date when="2006" type="published">2006</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteriological Techniques</term>
<term>Blood (microbiology)</term>
<term>DNA, Bacterial (chemistry)</term>
<term>DNA, Bacterial (genetics)</term>
<term>DNA, Ribosomal Spacer (genetics)</term>
<term>Enterococcus (classification)</term>
<term>Enterococcus (genetics)</term>
<term>Enterococcus (isolation & purification)</term>
<term>Gram-Positive Bacteria (classification)</term>
<term>Gram-Positive Bacteria (genetics)</term>
<term>Gram-Positive Bacteria (isolation & purification)</term>
<term>Gram-Positive Bacterial Infections (microbiology)</term>
<term>Humans</term>
<term>Molecular Sequence Data</term>
<term>Nucleic Acid Hybridization</term>
<term>Oligonucleotide Array Sequence Analysis</term>
<term>Oligonucleotide Probes</term>
<term>Polymerase Chain Reaction</term>
<term>Sensitivity and Specificity</term>
<term>Sequence Analysis, DNA</term>
<term>Streptococcus (classification)</term>
<term>Streptococcus (genetics)</term>
<term>Streptococcus (isolation & purification)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien ()</term>
<term>ADN bactérien (génétique)</term>
<term>Analyse de séquence d'ADN</term>
<term>Bactéries à Gram positif ()</term>
<term>Bactéries à Gram positif (génétique)</term>
<term>Bactéries à Gram positif (isolement et purification)</term>
<term>Données de séquences moléculaires</term>
<term>Enterococcus ()</term>
<term>Enterococcus (génétique)</term>
<term>Enterococcus (isolement et purification)</term>
<term>Espaceur de l'ADN ribosomique (génétique)</term>
<term>Humains</term>
<term>Hybridation d'acides nucléiques</term>
<term>Infections bactériennes à Gram positif (microbiologie)</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Sang (microbiologie)</term>
<term>Sensibilité et spécificité</term>
<term>Sondes oligonucléotidiques</term>
<term>Streptococcus ()</term>
<term>Streptococcus (génétique)</term>
<term>Streptococcus (isolement et purification)</term>
<term>Séquençage par oligonucléotides en batterie</term>
<term>Techniques bactériologiques</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>DNA, Bacterial</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Bacterial</term>
<term>DNA, Ribosomal Spacer</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Enterococcus</term>
<term>Gram-Positive Bacteria</term>
<term>Streptococcus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Enterococcus</term>
<term>Gram-Positive Bacteria</term>
<term>Streptococcus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term>
<term>Bactéries à Gram positif</term>
<term>Enterococcus</term>
<term>Espaceur de l'ADN ribosomique</term>
<term>Streptococcus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Enterococcus</term>
<term>Gram-Positive Bacteria</term>
<term>Streptococcus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Bactéries à Gram positif</term>
<term>Enterococcus</term>
<term>Streptococcus</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Infections bactériennes à Gram positif</term>
<term>Sang</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Blood</term>
<term>Gram-Positive Bacterial Infections</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Bacteriological Techniques</term>
<term>Humans</term>
<term>Molecular Sequence Data</term>
<term>Nucleic Acid Hybridization</term>
<term>Oligonucleotide Array Sequence Analysis</term>
<term>Oligonucleotide Probes</term>
<term>Polymerase Chain Reaction</term>
<term>Sensitivity and Specificity</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>ADN bactérien</term>
<term>Analyse de séquence d'ADN</term>
<term>Bactéries à Gram positif</term>
<term>Données de séquences moléculaires</term>
<term>Enterococcus</term>
<term>Humains</term>
<term>Hybridation d'acides nucléiques</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Sensibilité et spécificité</term>
<term>Sondes oligonucléotidiques</term>
<term>Streptococcus</term>
<term>Séquençage par oligonucléotides en batterie</term>
<term>Techniques bactériologiques</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Some species of enterococci and streptococci are difficult to differentiate by phenotypic traits. The feasibility of using an oligonucleotide array for identification of 11 viridans group streptococci was previously established. The aim of this study was to expand the array to identify species of Abiotrophia (1 species), Enterococcus (18 species), Granulicatella (3 species), and Streptococcus (31 species and 6 subspecies). The method consisted of PCR amplification of the ribosomal DNA intergenic spacer (ITS) regions, followed by hybridization of the digoxigenin-labeled PCR products to a panel of oligonucleotide probes (16- to 30-mers) immobilized on a nylon membrane. Probes could be divided into three categories: species specific, group specific, and supplemental probes. All probes were designed either from the ITS regions or from the 3' ends of the 16S rRNA genes. A collection of 312 target strains (162 reference strains and 150 clinical isolates) and 73 nontarget strains was identified by the array. Most clinical isolates were isolated from blood cultures or deep abscesses, and only those strains having excellent species identification with the Rapid ID 32 STREP system (bioMérieux Vitek, Taipei, Taiwan) were used for array testing. The test sensitivity and specificity of the array were 100% (312/312) and 98.6% (72/73), respectively. The whole procedure of array hybridization took about 8 h, starting from isolated colonies, and the hybridization patterns could be read by the naked eye. The oligonucleotide array is accurate for identification of the above microorganisms and could be used as a reliable alternative to phenotypic identification methods.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">17065265</PMID>
<DateCompleted><Year>2007</Year>
<Month>02</Month>
<Day>20</Day>
</DateCompleted>
<DateRevised><Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0095-1137</ISSN>
<JournalIssue CitedMedium="Print"><Volume>44</Volume>
<Issue>12</Issue>
<PubDate><Year>2006</Year>
<Month>Dec</Month>
</PubDate>
</JournalIssue>
<Title>Journal of clinical microbiology</Title>
<ISOAbbreviation>J. Clin. Microbiol.</ISOAbbreviation>
</Journal>
<ArticleTitle>Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.</ArticleTitle>
<Pagination><MedlinePgn>4414-24</MedlinePgn>
</Pagination>
<Abstract><AbstractText>Some species of enterococci and streptococci are difficult to differentiate by phenotypic traits. The feasibility of using an oligonucleotide array for identification of 11 viridans group streptococci was previously established. The aim of this study was to expand the array to identify species of Abiotrophia (1 species), Enterococcus (18 species), Granulicatella (3 species), and Streptococcus (31 species and 6 subspecies). The method consisted of PCR amplification of the ribosomal DNA intergenic spacer (ITS) regions, followed by hybridization of the digoxigenin-labeled PCR products to a panel of oligonucleotide probes (16- to 30-mers) immobilized on a nylon membrane. Probes could be divided into three categories: species specific, group specific, and supplemental probes. All probes were designed either from the ITS regions or from the 3' ends of the 16S rRNA genes. A collection of 312 target strains (162 reference strains and 150 clinical isolates) and 73 nontarget strains was identified by the array. Most clinical isolates were isolated from blood cultures or deep abscesses, and only those strains having excellent species identification with the Rapid ID 32 STREP system (bioMérieux Vitek, Taipei, Taiwan) were used for array testing. The test sensitivity and specificity of the array were 100% (312/312) and 98.6% (72/73), respectively. The whole procedure of array hybridization took about 8 h, starting from isolated colonies, and the hybridization patterns could be read by the naked eye. The oligonucleotide array is accurate for identification of the above microorganisms and could be used as a reliable alternative to phenotypic identification methods.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Tung</LastName>
<ForeName>Sheng Kai</ForeName>
<Initials>SK</Initials>
<AffiliationInfo><Affiliation>Department of Medical Laboratory Science and Biotechnology, School of Medicine, National Cheng Kung University, Tainan, Taiwan, Republic of China, and Department of Clinical Chemistry, Microbiology and Immunology, Ghent University Hospital, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Teng</LastName>
<ForeName>Lee Jene</ForeName>
<Initials>LJ</Initials>
</Author>
<Author ValidYN="Y"><LastName>Vaneechoutte</LastName>
<ForeName>Mario</ForeName>
<Initials>M</Initials>
</Author>
<Author ValidYN="Y"><LastName>Chen</LastName>
<ForeName>Hung Mo</ForeName>
<Initials>HM</Initials>
</Author>
<Author ValidYN="Y"><LastName>Chang</LastName>
<ForeName>Tsung Chain</ForeName>
<Initials>TC</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName>
<AccessionNumberList><AccessionNumber>AB023575</AccessionNumber>
<AccessionNumber>AY347538</AccessionNumber>
<AccessionNumber>AY347560</AccessionNumber>
<AccessionNumber>AY347561</AccessionNumber>
<AccessionNumber>AY347565</AccessionNumber>
<AccessionNumber>AY351327</AccessionNumber>
<AccessionNumber>AY353083</AccessionNumber>
<AccessionNumber>DQ204497</AccessionNumber>
<AccessionNumber>DQ204498</AccessionNumber>
<AccessionNumber>DQ204499</AccessionNumber>
<AccessionNumber>DQ204534</AccessionNumber>
<AccessionNumber>DQ204535</AccessionNumber>
<AccessionNumber>DQ204552</AccessionNumber>
<AccessionNumber>DQ204553</AccessionNumber>
<AccessionNumber>DQ204555</AccessionNumber>
<AccessionNumber>DQ204558</AccessionNumber>
<AccessionNumber>DQ204560</AccessionNumber>
</AccessionNumberList>
</DataBank>
</DataBankList>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2006</Year>
<Month>10</Month>
<Day>25</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>J Clin Microbiol</MedlineTA>
<NlmUniqueID>7505564</NlmUniqueID>
<ISSNLinking>0095-1137</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D021903">DNA, Ribosomal Spacer</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D015345">Oligonucleotide Probes</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D001431" MajorTopicYN="Y">Bacteriological Techniques</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001769" MajorTopicYN="N">Blood</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D021903" MajorTopicYN="N">DNA, Ribosomal Spacer</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016983" MajorTopicYN="N">Enterococcus</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D006094" MajorTopicYN="N">Gram-Positive Bacteria</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016908" MajorTopicYN="N">Gram-Positive Bacterial Infections</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D009693" MajorTopicYN="N">Nucleic Acid Hybridization</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020411" MajorTopicYN="Y">Oligonucleotide Array Sequence Analysis</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015345" MajorTopicYN="N">Oligonucleotide Probes</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016133" MajorTopicYN="N">Polymerase Chain Reaction</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012680" MajorTopicYN="N">Sensitivity and Specificity</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D013291" MajorTopicYN="N">Streptococcus</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2006</Year>
<Month>10</Month>
<Day>27</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2007</Year>
<Month>2</Month>
<Day>21</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2006</Year>
<Month>10</Month>
<Day>27</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">17065265</ArticleId>
<ArticleId IdType="pii">JCM.01712-06</ArticleId>
<ArticleId IdType="doi">10.1128/JCM.01712-06</ArticleId>
<ArticleId IdType="pmc">PMC1698397</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Clin Microbiol Rev. 2002 Oct;15(4):613-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12364372</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Bacteriol. 1995 Apr;45(2):406-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7537076</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Syst Appl Microbiol. 2003 Mar;26(1):97-103</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12747416</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2004 Mar;42(3):1048-57</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15004052</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2005 Apr;43(4):1782-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15814999</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2005 Mar;43(3):1475-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15750139</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2003 Sep;41(9):4071-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12958228</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Bacteriol. 1999 Oct;49 Pt 4:1591-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10555340</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Evol Microbiol. 2002 Jul;52(Pt 4):1247-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12148636</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2001 Dec;39(12):4477-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11724865</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Evol Microbiol. 2000 Jul;50 Pt 4:1425-34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10939646</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Med Microbiol. 1991 Dec;35(6):367-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1753394</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 1998 Nov;36(11):3399-407</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9774606</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Clin Infect Dis. 2004 May 15;38(10):1394-400</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15156477</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Med Microbiol. 1989 Apr;28(4):275-86</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2649679</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2000 Feb;38(2):781-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10655385</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2000 Nov;38(11):4201-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11060090</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microbiology. 1996 Jan;142 ( Pt 1):3-16</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8581168</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Microbiol Methods. 2000 Oct;42(2):139-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11018270</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 1996 Jul;34(7):1717-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8784576</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Microbiol Methods. 2000 Oct;42(2):203-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11018277</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 1997 Sep;35(9):2337-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9276413</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Antimicrob Chemother. 1998 Jun;41(6):621-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9687100</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2004 Jun;42(6):2651-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15184447</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 1998 Jan;36(1):139-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9431937</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2005 Apr;43(4):1515-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15814960</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microbiology. 1995 Jun;141 ( Pt 6):1461-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7545512</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2002 Feb;40(2):707-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11826003</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2002 Sep;40(9):3172-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12202549</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 1995 May;33(5):1215-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7615731</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 1989 Feb;27(2):305-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2915024</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2000 Jan;38(1):415-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10618129</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2006 Mar 1;22(5):527-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16403794</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2004 May;42(5):2065-73</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15131171</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2004 Aug;42(8):3686-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15297518</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2004 Feb;42(2):497-504</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14766807</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2001 Apr;39(4):1549-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11283085</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Bacteriol. 1998 Jul;48 Pt 3:1049-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9734063</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2001 Apr;39(4):1436-42</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11283068</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bacteriol Rev. 1937 Dec;1(1):3-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16350049</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2002 Dec;40(12):4720-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12454178</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Evol Microbiol. 2003 May;53(Pt 3):631-45</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12807180</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Food Prot. 2005 Nov;68(11):2278-86</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16300063</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2005 Dec;43(12):6189-93</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16333127</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Bacteriol. 1997 Apr;47(2):555-61</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9103648</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2005 Dec;43(12):5983-91</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16333086</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2005 Dec;43(12):6073-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16333101</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Clin Microbiol. 2003 Jun;41(6):2605-15</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12791887</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Adv Exp Med Biol. 1997;418:397-400</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9331679</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Am J Clin Pathol. 1991 Oct;96(4):459-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1892121</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Bacteriol. 1991 Oct;41(4):487-94</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1720654</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/PubMed/Curation

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002216 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd -nk 002216 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    MersV1
   |flux=    PubMed
   |étape=   Curation
   |type=    RBID
   |clé=     pubmed:17065265
   |texte=   Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Curation/RBID.i   -Sk "pubmed:17065265" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd   \
       | NlmPubMed2Wicri -a MersV1

This area was generated with Dilib version V0.6.33.
Data generation: Mon Apr 20 23:26:43 2020. Site generation: Sat Mar 27 09:06:09 2021

	Serveur d'exploration MERS
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration MERS

Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.

Array-based identification of species of the genera Abiotrophia, Enterococcus, Granulicatella, and Streptococcus.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki