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Databases, Factual < Databases, Genetic < Databases, Nucleic Acid  Facettes :

List of bibliographic references

Number of relevant bibliographic references: 37.
[0-20] [0 - 20][0 - 37][20-36][20-40]
Ident.Authors (with country if any)Title
000405 (2019) Lisa K. Johnson [États-Unis] ; Harriet Alexander [États-Unis] ; C Titus Brown [États-Unis]Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes.
000482 (2019) Jia Qian [Italie] ; Matteo Comin [Italie]MetaCon: unsupervised clustering of metagenomic contigs with probabilistic k-mers statistics and coverage.
000717 (2018) Md Rafsan Jani [Bangladesh] ; Md Toha Khan Mozlish [Bangladesh] ; Sajid Ahmed [Bangladesh] ; Niger Sultana Tahniat [Bangladesh] ; Dewan Md Farid [Bangladesh] ; Swakkhar Shatabda [Bangladesh]iRecSpot-EF: Effective sequence based features for recombination hotspot prediction.
000767 (2018) Olga V. Matveeva [États-Unis] ; Aleksey Y. Ogurtsov [États-Unis] ; Nafisa N. Nazipova [Russie] ; Svetlana A. Shabalina [États-Unis]Sequence characteristics define trade-offs between on-target and genome-wide off-target hybridization of oligoprobes.
000805 (2018) Pierre Mahé [France] ; Maud Tournoud [France]Predicting bacterial resistance from whole-genome sequences using k-mers and stability selection.
000909 (2018) Jessime M. Kirk [États-Unis] ; Susan O. Kim [États-Unis] ; Kaoru Inoue [États-Unis] ; Matthew J. Smola [États-Unis] ; David M. Lee [États-Unis] ; Megan D. Schertzer [États-Unis] ; Joshua S. Wooten [États-Unis] ; Allison R. Baker [États-Unis] ; Daniel Sprague [États-Unis] ; David W. Collins [États-Unis] ; Christopher R. Horning [États-Unis] ; Shuo Wang [États-Unis] ; Qidi Chen [États-Unis] ; Kevin M. Weeks [États-Unis] ; Peter J. Mucha [États-Unis] ; J Mauro Calabrese [États-Unis]Functional classification of long non-coding RNAs by k-mer content.
000964 (2018) Peter A. Noble [États-Unis] ; Alexander E. Pozhitkov [États-Unis]Cryptic sequence features in the active postmortem transcriptome.
000A39 (2018) Magali Jaillard [France] ; Leandro Lima [France] ; Maud Tournoud [France] ; Pierre Mahé [France] ; Alex Van Belkum [France] ; Vincent Lacroix [France] ; Laurent Jacob [France]A fast and agnostic method for bacterial genome-wide association studies: Bridging the gap between k-mers and genetic events.
000A43 (2018) Swati C. Manekar [Inde] ; Shailesh R. Sathe [Inde]A benchmark study of k-mer counting methods for high-throughput sequencing.
000A61 (2017) Eneida L. Hatcher [États-Unis] ; Sergey A. Zhdanov [États-Unis] ; Yiming Bao [États-Unis] ; Olga Blinkova [États-Unis] ; Eric P. Nawrocki [États-Unis] ; Yuri Ostapchuck [États-Unis] ; Alejandro A. Sch Ffer [États-Unis] ; J Rodney Brister [Burundi]Virus Variation Resource - improved response to emergent viral outbreaks.
000A64 (2017) Qian Zhang [États-Unis] ; Se-Ran Jun [États-Unis] ; Michael Leuze [États-Unis] ; David Ussery [États-Unis] ; Intawat Nookaew [États-Unis]Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer.
000A93 (2017) Meznah Almutairy [États-Unis] ; Eric Torng [États-Unis]The effects of sampling on the efficiency and accuracy of k-mer indexes: Theoretical and empirical comparisons using the human genome.
000B29 (2017) Francisco Vargas-Albores [Mexique] ; Luis Enrique Ortiz-Suárez [Mexique] ; Enrique Villalpando-Canchola [Mexique] ; Marcel Martínez-Porchas [Mexique]Size-variable zone in V3 region of 16S rRNA.
000C27 (2017) Dinghua Li [Hong Kong] ; Yukun Huang [Hong Kong] ; Chi-Ming Leung [Hong Kong] ; Ruibang Luo [Hong Kong] ; Hing-Fung Ting [Hong Kong] ; Tak-Wah Lam [Hong Kong]MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs.
000F53 (2016) Qiang Yu [République populaire de Chine] ; Hongwei Huo [République populaire de Chine] ; Dazheng Feng [République populaire de Chine]PairMotifChIP: A Fast Algorithm for Discovery of Patterns Conserved in Large ChIP-seq Data Sets.
001215 (2016) Veronika B. Dubinkina [Russie] ; Dmitry S. Ischenko [Russie] ; Vladimir I. Ulyantsev [Russie] ; Alexander V. Tyakht [Russie] ; Dmitry G. Alexeev [Russie]Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis.
001342 (2015) Karel B Inda [France] ; Maciej Sykulski [France] ; Gregory Kucherov [France]Spaced seeds improve k-mer-based metagenomic classification.
001355 (2015) Ramin Karimi ; Andras HajduSRIdent: A novel pipeline for real-time identification of species from high-throughput sequencing reads in Metagenomics and clinical diagnostic assays.
001375 (2015) Ezzeddin Kamil Mohamed Hashim [Malaisie] ; Rosni Abdullah [Malaisie]Rare k-mer DNA: Identification of sequence motifs and prediction of CpG island and promoter.
001581 (2015) Brian Cleary [États-Unis] ; Ilana Lauren Brito [États-Unis] ; Katherine Huang [États-Unis] ; Dirk Gevers [États-Unis] ; Terrance Shea [États-Unis] ; Sarah Young [États-Unis] ; Eric J. Alm [États-Unis]Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning.
001607 (2015) Jolanta Kawulok [Pologne] ; Sebastian Deorowicz [Pologne]CoMeta: classification of metagenomes using k-mers.

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