Nucleotide excision repair in the third kingdom.
Identifieur interne : 002521 ( PubMed/Checkpoint ); précédent : 002520; suivant : 002522Nucleotide excision repair in the third kingdom.
Auteurs : M. Ogrünç [États-Unis] ; D F Becker ; S W Ragsdale ; A. SancarSource :
- Journal of bacteriology [ 0021-9193 ] ; 1998.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- chemical : DNA, Archaeal, Nucleotides.
- genetics : Escherichia coli, Methanobacterium.
- Animals, CHO Cells, Cricetinae, DNA Damage, DNA Repair.
Abstract
Nucleotide excision repair, a general repair mechanism for removing DNA damage, is initiated by dual incisions bracketing the lesion. In procaryotes, the dual incisions result in excision of the damage in 12- to 13-nucleotide-long oligomers, and in eucaryotes they result in excision of the damage in the form of 24- to 32-nucleotide-long oligomers. We wished to find out if Archaea perform excision repair. Using cell extracts from Methanobacterium thermoautotrophicum, we found that this organism removes UV-induced (6-4) photoproducts in the form of 10- to 11-mers by incising the sixth to seventh phosphodiester bond 5' to the damage and the fourth phosphodiester bond 3' to the damage.
PubMed: 9791138
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
pubmed:9791138Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Nucleotide excision repair in the third kingdom.</title><author><name sortKey="Ogrunc, M" sort="Ogrunc, M" uniqKey="Ogrunc M" first="M" last="Ogrünç">M. Ogrünç</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599</wicri:regionArea><wicri:noRegion>North Carolina 27599</wicri:noRegion></affiliation></author><author><name sortKey="Becker, D F" sort="Becker, D F" uniqKey="Becker D" first="D F" last="Becker">D F Becker</name></author><author><name sortKey="Ragsdale, S W" sort="Ragsdale, S W" uniqKey="Ragsdale S" first="S W" last="Ragsdale">S W Ragsdale</name></author><author><name sortKey="Sancar, A" sort="Sancar, A" uniqKey="Sancar A" first="A" last="Sancar">A. Sancar</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="1998">1998</date><idno type="RBID">pubmed:9791138</idno><idno type="pmid">9791138</idno><idno type="wicri:Area/PubMed/Corpus">002663</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002663</idno><idno type="wicri:Area/PubMed/Curation">002663</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002663</idno><idno type="wicri:Area/PubMed/Checkpoint">002521</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002521</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Nucleotide excision repair in the third kingdom.</title><author><name sortKey="Ogrunc, M" sort="Ogrunc, M" uniqKey="Ogrunc M" first="M" last="Ogrünç">M. Ogrünç</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599</wicri:regionArea><wicri:noRegion>North Carolina 27599</wicri:noRegion></affiliation></author><author><name sortKey="Becker, D F" sort="Becker, D F" uniqKey="Becker D" first="D F" last="Becker">D F Becker</name></author><author><name sortKey="Ragsdale, S W" sort="Ragsdale, S W" uniqKey="Ragsdale S" first="S W" last="Ragsdale">S W Ragsdale</name></author><author><name sortKey="Sancar, A" sort="Sancar, A" uniqKey="Sancar A" first="A" last="Sancar">A. Sancar</name></author></analytic><series><title level="j">Journal of bacteriology</title><idno type="ISSN">0021-9193</idno><imprint><date when="1998" type="published">1998</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>CHO Cells</term><term>Cricetinae</term><term>DNA Damage</term><term>DNA Repair</term><term>DNA, Archaeal</term><term>Escherichia coli (genetics)</term><term>Methanobacterium (genetics)</term><term>Nucleotides</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN des archées</term><term>Altération de l'ADN</term><term>Animaux</term><term>Cellules CHO</term><term>Cricetinae</term><term>Escherichia coli (génétique)</term><term>Methanobacterium (génétique)</term><term>Nucléotides</term><term>Réparation de l'ADN</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA, Archaeal</term><term>Nucleotides</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Escherichia coli</term><term>Methanobacterium</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Escherichia coli</term><term>Methanobacterium</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>CHO Cells</term><term>Cricetinae</term><term>DNA Damage</term><term>DNA Repair</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>ADN des archées</term><term>Altération de l'ADN</term><term>Animaux</term><term>Cellules CHO</term><term>Cricetinae</term><term>Nucléotides</term><term>Réparation de l'ADN</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Nucleotide excision repair, a general repair mechanism for removing DNA damage, is initiated by dual incisions bracketing the lesion. In procaryotes, the dual incisions result in excision of the damage in 12- to 13-nucleotide-long oligomers, and in eucaryotes they result in excision of the damage in the form of 24- to 32-nucleotide-long oligomers. We wished to find out if Archaea perform excision repair. Using cell extracts from Methanobacterium thermoautotrophicum, we found that this organism removes UV-induced (6-4) photoproducts in the form of 10- to 11-mers by incising the sixth to seventh phosphodiester bond 5' to the damage and the fourth phosphodiester bond 3' to the damage.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">9791138</PMID><DateCompleted><Year>1998</Year><Month>12</Month><Day>22</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0021-9193</ISSN><JournalIssue CitedMedium="Print"><Volume>180</Volume><Issue>21</Issue><PubDate><Year>1998</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Journal of bacteriology</Title><ISOAbbreviation>J. Bacteriol.</ISOAbbreviation></Journal><ArticleTitle>Nucleotide excision repair in the third kingdom.</ArticleTitle><Pagination><MedlinePgn>5796-8</MedlinePgn></Pagination><Abstract><AbstractText>Nucleotide excision repair, a general repair mechanism for removing DNA damage, is initiated by dual incisions bracketing the lesion. In procaryotes, the dual incisions result in excision of the damage in 12- to 13-nucleotide-long oligomers, and in eucaryotes they result in excision of the damage in the form of 24- to 32-nucleotide-long oligomers. We wished to find out if Archaea perform excision repair. Using cell extracts from Methanobacterium thermoautotrophicum, we found that this organism removes UV-induced (6-4) photoproducts in the form of 10- to 11-mers by incising the sixth to seventh phosphodiester bond 5' to the damage and the fourth phosphodiester bond 3' to the damage.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ogrünç</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Becker</LastName><ForeName>D F</ForeName><Initials>DF</Initials></Author><Author ValidYN="Y"><LastName>Ragsdale</LastName><ForeName>S W</ForeName><Initials>SW</Initials></Author><Author ValidYN="Y"><LastName>Sancar</LastName><ForeName>A</ForeName><Initials>A</Initials></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>R01 GM032833</GrantID><Acronym>GM</Acronym><Agency>NIGMS NIH HHS</Agency><Country>United States</Country></Grant><Grant><GrantID>GM32833</GrantID><Acronym>GM</Acronym><Agency>NIGMS NIH HHS</Agency><Country>United States</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013487">Research Support, U.S. Gov't, P.H.S.</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>J Bacteriol</MedlineTA><NlmUniqueID>2985120R</NlmUniqueID><ISSNLinking>0021-9193</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D019641">DNA, Archaeal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D009711">Nucleotides</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CitationSubset>S</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016466" MajorTopicYN="N">CHO Cells</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006224" MajorTopicYN="N">Cricetinae</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004249" MajorTopicYN="Y">DNA Damage</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004260" MajorTopicYN="Y">DNA Repair</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019641" MajorTopicYN="Y">DNA, Archaeal</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004926" MajorTopicYN="N">Escherichia coli</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017014" MajorTopicYN="N">Methanobacterium</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D009711" MajorTopicYN="N">Nucleotides</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>1998</Year><Month>10</Month><Day>29</Day></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>1998</Year><Month>10</Month><Day>29</Day><Hour>0</Hour><Minute>1</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>1998</Year><Month>10</Month><Day>29</Day><Hour>0</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">9791138</ArticleId><ArticleId IdType="pmc">PMC107647</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Science. 1994 Dec 23;266(5193):1954-6</Citation><ArticleIdList><ArticleId IdType="pubmed">7801120</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Genet. 1993;27:33-70</Citation><ArticleIdList><ArticleId IdType="pubmed">8122907</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1995 Sep 15;270(37):22008-16</Citation><ArticleIdList><ArticleId IdType="pubmed">7665622</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1995 Oct 20;270(5235):397-403</Citation><ArticleIdList><ArticleId IdType="pubmed">7569993</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1996 Aug 23;273(5278):1058-73</Citation><ArticleIdList><ArticleId IdType="pubmed">8688087</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Biochem. 1996;65:43-81</Citation><ArticleIdList><ArticleId IdType="pubmed">8811174</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Biochem. 1996;65:135-67</Citation><ArticleIdList><ArticleId IdType="pubmed">8811177</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Cell Biol. 1997 Feb;17(2):760-9</Citation><ArticleIdList><ArticleId IdType="pubmed">9001230</ArticleId></ArticleIdList></Reference><Reference><Citation>Eur J Biochem. 1997 Jan 15;243(1-2):110-4</Citation><ArticleIdList><ArticleId IdType="pubmed">9030728</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 1997 Jun 27;89(7):991-4</Citation><ArticleIdList><ArticleId IdType="pubmed">9215619</ArticleId></ArticleIdList></Reference><Reference><Citation>J Bacteriol. 1997 Nov;179(22):7135-55</Citation><ArticleIdList><ArticleId IdType="pubmed">9371463</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 1997 Nov 27;390(6658):364-70</Citation><ArticleIdList><ArticleId IdType="pubmed">9389475</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 1998 Mar 26;392(6674):339-42</Citation><ArticleIdList><ArticleId IdType="pubmed">9537318</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1977 Nov;74(11):5088-90</Citation><ArticleIdList><ArticleId IdType="pubmed">270744</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1984 Jul 25;177(1):173-80</Citation><ArticleIdList><ArticleId IdType="pubmed">6748082</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 1983 May;33(1):249-60</Citation><ArticleIdList><ArticleId IdType="pubmed">6380755</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 1985 May 10;13(9):3285-304</Citation><ArticleIdList><ArticleId IdType="pubmed">2987881</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1992 Apr 15;89(8):3664-8</Citation><ArticleIdList><ArticleId IdType="pubmed">1314396</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1993 Jan 25;268(3):1931-6</Citation><ArticleIdList><ArticleId IdType="pubmed">8420966</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biol Chem. 1995 Jun 2;270(22):12973-6</Citation><ArticleIdList><ArticleId IdType="pubmed">7768886</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country></list><tree><noCountry><name sortKey="Becker, D F" sort="Becker, D F" uniqKey="Becker D" first="D F" last="Becker">D F Becker</name><name sortKey="Ragsdale, S W" sort="Ragsdale, S W" uniqKey="Ragsdale S" first="S W" last="Ragsdale">S W Ragsdale</name><name sortKey="Sancar, A" sort="Sancar, A" uniqKey="Sancar A" first="A" last="Sancar">A. Sancar</name></noCountry><country name="États-Unis"><noRegion><name sortKey="Ogrunc, M" sort="Ogrunc, M" uniqKey="Ogrunc M" first="M" last="Ogrünç">M. Ogrünç</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/PubMed/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002521 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd -nk 002521 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= MersV1
|flux= PubMed
|étape= Checkpoint
|type= RBID
|clé= pubmed:9791138
|texte= Nucleotide excision repair in the third kingdom.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/RBID.i -Sk "pubmed:9791138" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd \
| NlmPubMed2Wicri -a MersV1
| This area was generated with Dilib version V0.6.33. |  |