Serveur d'exploration MERS

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Potent MERS-CoV Fusion Inhibitory Peptides Identified from HR2 Domain in Spike Protein of Bat Coronavirus HKU4

Identifieur interne : 001215 ( Pmc/Curation ); précédent : 001214; suivant : 001216

Potent MERS-CoV Fusion Inhibitory Peptides Identified from HR2 Domain in Spike Protein of Bat Coronavirus HKU4

Auteurs : Shuai Xia ; Qiaoshuai Lan ; Jing Pu ; Cong Wang ; Zezhong Liu ; Wei Xu ; Qian Wang ; Huan Liu [République populaire de Chine] ; Shibo Jiang [États-Unis] ; Lu Lu

Source :

RBID : PMC:6357153

Abstract

The Middle East respiratory syndrome coronavirus (MERS-CoV) emerged in 2012 and caused continual outbreaks worldwide with high mortality. However, no effective anti-MERS-CoV drug is currently available. Recently, numerous evolutionary studies have suggested that MERS-CoV originated from bat coronavirus (BatCoV). We herein reported that three peptides derived from the HR2 region in spike protein of BatCoV HKU4, including HKU4-HR2P1, HKU4-HR2P2 and HKU4-HR2P3, could bind the MERS-CoV HR1-derived peptide to form a six-helix bundle (6-HB) with high stability. Moreover, these peptides, particularly HKU4-HR2P2 and HKU4-HR2P3, exhibited potent inhibitory activity against MERS-CoV S-mediated cell–cell fusion and viral infection, suggesting that these HKU4 HR2-derived peptides could be candidates for futher development as antiviral agents against MERS-CoV infection.


Url:
DOI: 10.3390/v11010056
PubMed: 30646495
PubMed Central: 6357153

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PMC:6357153

Le document en format XML

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<title xml:lang="en" level="a" type="main">Potent MERS-CoV Fusion Inhibitory Peptides Identified from HR2 Domain in Spike Protein of Bat Coronavirus HKU4</title>
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<name sortKey="Lu, Lu" sort="Lu, Lu" uniqKey="Lu L" first="Lu" last="Lu">Lu Lu</name>
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<title level="j">Viruses</title>
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<div type="abstract" xml:lang="en">
<p>The Middle East respiratory syndrome coronavirus (MERS-CoV) emerged in 2012 and caused continual outbreaks worldwide with high mortality. However, no effective anti-MERS-CoV drug is currently available. Recently, numerous evolutionary studies have suggested that MERS-CoV originated from bat coronavirus (BatCoV). We herein reported that three peptides derived from the HR2 region in spike protein of BatCoV HKU4, including HKU4-HR2P1, HKU4-HR2P2 and HKU4-HR2P3, could bind the MERS-CoV HR1-derived peptide to form a six-helix bundle (6-HB) with high stability. Moreover, these peptides, particularly HKU4-HR2P2 and HKU4-HR2P3, exhibited potent inhibitory activity against MERS-CoV S-mediated cell–cell fusion and viral infection, suggesting that these HKU4 HR2-derived peptides could be candidates for futher development as antiviral agents against MERS-CoV infection.</p>
</div>
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<back>
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<name sortKey="Chand, M A" uniqKey="Chand M">M.A. Chand</name>
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</TEI>
<pmc article-type="research-article">
<pmc-dir>properties open_access</pmc-dir>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Viruses</journal-id>
<journal-id journal-id-type="iso-abbrev">Viruses</journal-id>
<journal-id journal-id-type="publisher-id">viruses</journal-id>
<journal-title-group>
<journal-title>Viruses</journal-title>
</journal-title-group>
<issn pub-type="epub">1999-4915</issn>
<publisher>
<publisher-name>MDPI</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="pmid">30646495</article-id>
<article-id pub-id-type="pmc">6357153</article-id>
<article-id pub-id-type="doi">10.3390/v11010056</article-id>
<article-id pub-id-type="publisher-id">viruses-11-00056</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Article</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Potent MERS-CoV Fusion Inhibitory Peptides Identified from HR2 Domain in Spike Protein of Bat Coronavirus HKU4</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid" authenticated="true">https://orcid.org/0000-0001-7896-4182</contrib-id>
<name>
<surname>Xia</surname>
<given-names>Shuai</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid" authenticated="true">https://orcid.org/0000-0001-5524-3542</contrib-id>
<name>
<surname>Lan</surname>
<given-names>Qiaoshuai</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Pu</surname>
<given-names>Jing</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wang</surname>
<given-names>Cong</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Zezhong</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xu</surname>
<given-names>Wei</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wang</surname>
<given-names>Qian</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Huan</given-names>
</name>
<xref ref-type="aff" rid="af2-viruses-11-00056">2</xref>
<xref rid="c1-viruses-11-00056" ref-type="corresp">*</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Jiang</surname>
<given-names>Shibo</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
<xref ref-type="aff" rid="af3-viruses-11-00056">3</xref>
<xref rid="c1-viruses-11-00056" ref-type="corresp">*</xref>
</contrib>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid" authenticated="true">https://orcid.org/0000-0002-2255-0391</contrib-id>
<name>
<surname>Lu</surname>
<given-names>Lu</given-names>
</name>
<xref ref-type="aff" rid="af1-viruses-11-00056">1</xref>
<xref rid="c1-viruses-11-00056" ref-type="corresp">*</xref>
</contrib>
</contrib-group>
<aff id="af1-viruses-11-00056">
<label>1</label>
Key Laboratory of Medical Molecular Virology of MOE/MOH, School of Basic Medical Sciences and Shanghai Public Health Clinical Center, Fudan University, Shanghai 200032, China;
<email>15111010053@fudan.edu.cn</email>
(S.X.);
<email>18111010010@fudan.edu.cn</email>
(Q.L.);
<email>17111010015@fudan.edu.cn</email>
(J.P.);
<email>16111010068@fudan.edu.cn</email>
(C.W.);
<email>17111010065@fudan.edu.cn</email>
(Z.L.);
<email>xuwei11@fudan.edu.cn</email>
(W.X.);
<email>wang_qian@fudan.edu.cn</email>
(Q.W.)</aff>
<aff id="af2-viruses-11-00056">
<label>2</label>
State Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China</aff>
<aff id="af3-viruses-11-00056">
<label>3</label>
Lindsley F. Kimball Research Institute, New York Blood Center, New York, NY 10065, USA</aff>
<author-notes>
<corresp id="c1-viruses-11-00056">
<label>*</label>
Correspondence:
<email>liuhuan@wh.iov.cn</email>
(H.L.);
<email>shibojiang@fudan.edu.cn</email>
(S.J.);
<email>lul@fudan.edu.cn</email>
(L.L.); Tel.: +86-027-8719-9810 (H.L.); +1-212-570-3058 (S.J.); +86-21-5423-7671 (L.L.) </corresp>
</author-notes>
<pub-date pub-type="epub">
<day>14</day>
<month>1</month>
<year>2019</year>
</pub-date>
<pub-date pub-type="collection">
<month>1</month>
<year>2019</year>
</pub-date>
<volume>11</volume>
<issue>1</issue>
<elocation-id>56</elocation-id>
<history>
<date date-type="received">
<day>07</day>
<month>12</month>
<year>2018</year>
</date>
<date date-type="accepted">
<day>10</day>
<month>1</month>
<year>2019</year>
</date>
</history>
<permissions>
<copyright-statement>© 2019 by the authors.</copyright-statement>
<copyright-year>2019</copyright-year>
<license license-type="open-access">
<license-p>Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (
<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</ext-link>
).</license-p>
</license>
</permissions>
<abstract>
<p>The Middle East respiratory syndrome coronavirus (MERS-CoV) emerged in 2012 and caused continual outbreaks worldwide with high mortality. However, no effective anti-MERS-CoV drug is currently available. Recently, numerous evolutionary studies have suggested that MERS-CoV originated from bat coronavirus (BatCoV). We herein reported that three peptides derived from the HR2 region in spike protein of BatCoV HKU4, including HKU4-HR2P1, HKU4-HR2P2 and HKU4-HR2P3, could bind the MERS-CoV HR1-derived peptide to form a six-helix bundle (6-HB) with high stability. Moreover, these peptides, particularly HKU4-HR2P2 and HKU4-HR2P3, exhibited potent inhibitory activity against MERS-CoV S-mediated cell–cell fusion and viral infection, suggesting that these HKU4 HR2-derived peptides could be candidates for futher development as antiviral agents against MERS-CoV infection.</p>
</abstract>
<kwd-group>
<kwd>MERS-CoV</kwd>
<kwd>fusion inhibitor</kwd>
<kwd>peptide</kwd>
<kwd>cell–cell fusion</kwd>
<kwd>HKU4</kwd>
</kwd-group>
</article-meta>
</front>
<floats-group>
<fig id="viruses-11-00056-f001" orientation="portrait" position="float">
<label>Figure 1</label>
<caption>
<p>The design of HKU4 HR2-derived peptides. (
<bold>A</bold>
) Neighbor-joining tree created with the spike sequence of representative bat-CoVs and Infectious Bronchitis Virus (IBV). (
<bold>B</bold>
) The antiviral mechanism of HR2-derived peptides. (
<bold>C</bold>
) Schematic representation of HKU4 S protein S2 subunit. FP, fusion peptide; HR, heptad repeat domain; TM, transmembrane domain; CP, cytoplasmic domain. Corresponding sequences of the designed peptides (HKU4-HR1P and HKU4-HR2Ps) are shown in the diagram. The helical region in the HR1- and HR2-derived peptides is highlighted in the red boxes, according to the sequences of MERS-HR1P and MERS-HR2P. The identical amino acids at the
<italic>e</italic>
and
<italic>g</italic>
positions in HR1 and those at
<italic>a</italic>
and
<italic>d</italic>
positions in HR2 of MERS-CoV and HKU4 are highlighted in red. The different amino acids in HR1Ps and HR2Ps between MERS-CoV and HKU4 are highlighted in green.</p>
</caption>
<graphic xlink:href="viruses-11-00056-g001"></graphic>
</fig>
<fig id="viruses-11-00056-f002" orientation="portrait" position="float">
<label>Figure 2</label>
<caption>
<p>Determination of the interactions between HKU4-HR1P with HKU4-HR2P1 (
<bold>A</bold>
), HKU4-HR2P2 (
<bold>B</bold>
) and HKU4-HR2P3 (
<bold>C</bold>
), as well as the interaction between MERS-HR1P with HKU4-HR2P1 (
<bold>D</bold>
), HKU4-HR2P2 (
<bold>E</bold>
) and HKU4-HR2P3 (
<bold>F</bold>
) by native polyacrylamide gel electrophoresis (N-PAGE).</p>
</caption>
<graphic xlink:href="viruses-11-00056-g002"></graphic>
</fig>
<fig id="viruses-11-00056-f003" orientation="portrait" position="float">
<label>Figure 3</label>
<caption>
<p>Circular dichroism (CD) spectra of MERS-HR1P, MERS-HR2P and MERS-HR1P/MERS-HR2P complex (
<bold>A</bold>
), MERS-HR1P, HKU4-HR2P1 and MERS-HR1P/ HKU4-HR2P1 complex (
<bold>B</bold>
), MERS-HR1P, HKU4-HR2P2 and MERS-HR1P/ HKU4-HR2P2 complex (
<bold>C</bold>
), MERS-HR1P, HKU4-HR2P3 and MERS-HR1P/ HKU4-HR2P3 complex (
<bold>D</bold>
) in phosphate buffer (pH 7.2). (
<bold>E</bold>
) Melting curves of the complexes formed by MERS-HR1P and MERS-HR2P, HKU4-HR2P1, HKU4-HR2P2, or HKU4-HR2P3, respectively.</p>
</caption>
<graphic xlink:href="viruses-11-00056-g003"></graphic>
</fig>
<fig id="viruses-11-00056-f004" orientation="portrait" position="float">
<label>Figure 4</label>
<caption>
<p>Inhibitory activity of peptides as demonstrated by MERS-CoV S-mediated cell–cell fusion assay. (
<bold>A</bold>
) Images of MERS-CoV S protein-mediated cell–cell fusion in the presence of MERS-HR1P, MERS-HR2P, HKU4-HR2P1, HKU4-HR2P2, HKU4-HR2P3 and HKU4-HR1P, respectively, all at the concentration of 10 μM. Arrows show the fused cells. Scale bars, 800 μm. (
<bold>B</bold>
) Inhibitory activities of MERS-HR2P, HKU4-HR2P1, HKU4-HR2P2, HKU4-HR2P3, HKU4-HR1P and MERS-HR1P against MERS-CoV S-mediated cell–cell fusion. Each sample was tested in triplicate and the data are expressed as means ± standard deviation (SD). Each experiment was repeated twice and similar results were obtained.</p>
</caption>
<graphic xlink:href="viruses-11-00056-g004"></graphic>
</fig>
<fig id="viruses-11-00056-f005" orientation="portrait" position="float">
<label>Figure 5</label>
<caption>
<p>Inhibitory activity of peptides as demonstrated by pseudotyped MERS-CoV infection mediated by S protein (
<bold>A</bold>
) or S protein with Q1020H (
<bold>B</bold>
) or Q1020R (
<bold>C</bold>
). Each sample was tested in triplicate and the data are expressed as means ± SD. Each experiment was repeated twice and similar results were obtained.</p>
</caption>
<graphic xlink:href="viruses-11-00056-g005"></graphic>
</fig>
<table-wrap id="viruses-11-00056-t001" orientation="portrait" position="float">
<object-id pub-id-type="pii">viruses-11-00056-t001_Table 1</object-id>
<label>Table 1</label>
<caption>
<p>Solubility and inhibitory activities of peptides.</p>
</caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th rowspan="4" align="center" valign="middle" style="border-top:solid thin;border-bottom:solid thin" colspan="1">Peptide</th>
<th rowspan="3" align="center" valign="middle" style="border-top:solid thin;border-bottom:solid thin" colspan="1">Average Hydro-Philicity</th>
<th colspan="4" align="center" valign="middle" style="border-top:solid thin;border-bottom:solid thin" rowspan="1">Solubility (μM) in</th>
<th colspan="8" align="center" valign="middle" style="border-top:solid thin;border-bottom:solid thin" rowspan="1">Inhibitory Activity of Peptides, IC
<sub>50</sub>
(μM)</th>
</tr>
<tr>
<th rowspan="2" colspan="2" align="center" valign="middle" style="border-bottom:solid thin">PBS (pH 7.2)</th>
<th rowspan="2" colspan="2" align="center" valign="middle" style="border-bottom:solid thin">Water</th>
<th colspan="2" align="center" valign="middle" style="border-bottom:solid thin" rowspan="1">Cell–Cell Fusion</th>
<th colspan="6" align="center" valign="middle" style="border-bottom:solid thin" rowspan="1">Pseudovirus Infection</th>
</tr>
<tr>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1"></th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1"></th>
<th colspan="2" align="center" valign="middle" style="border-bottom:solid thin" rowspan="1">Q1020</th>
<th colspan="2" align="center" valign="middle" style="border-bottom:solid thin" rowspan="1">Q1020H</th>
<th colspan="2" align="center" valign="middle" style="border-bottom:solid thin" rowspan="1">Q1020R</th>
</tr>
<tr>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1"></th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">Mean</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">SD</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">Mean</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">SD</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">Mean</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">SD</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">Mean</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">SD</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">Mean</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">SD</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">Mean</th>
<th align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">SD</th>
</tr>
</thead>
<tbody>
<tr>
<td align="center" valign="middle" rowspan="1" colspan="1">HKU4-HR2P1</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.0</td>
<td align="center" valign="middle" rowspan="1" colspan="1">1569</td>
<td align="center" valign="middle" rowspan="1" colspan="1">110</td>
<td align="center" valign="middle" rowspan="1" colspan="1">651</td>
<td align="center" valign="middle" rowspan="1" colspan="1">40</td>
<td align="center" valign="middle" rowspan="1" colspan="1">1.09</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.21</td>
<td align="center" valign="middle" rowspan="1" colspan="1">2.15</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.17</td>
<td align="center" valign="middle" rowspan="1" colspan="1">2.72</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.59</td>
<td align="center" valign="middle" rowspan="1" colspan="1">2.42</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.93</td>
</tr>
<tr>
<td align="center" valign="middle" rowspan="1" colspan="1">HKU4-HR2P2</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.2</td>
<td align="center" valign="middle" rowspan="1" colspan="1">2924</td>
<td align="center" valign="middle" rowspan="1" colspan="1">131</td>
<td align="center" valign="middle" rowspan="1" colspan="1">150</td>
<td align="center" valign="middle" rowspan="1" colspan="1">25</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.38</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.01</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.34</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.06</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.44</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.1</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.3</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.04</td>
</tr>
<tr>
<td align="center" valign="middle" rowspan="1" colspan="1">HKU4-HR2P3</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.0</td>
<td align="center" valign="middle" rowspan="1" colspan="1">118</td>
<td align="center" valign="middle" rowspan="1" colspan="1">13</td>
<td align="center" valign="middle" rowspan="1" colspan="1">1674</td>
<td align="center" valign="middle" rowspan="1" colspan="1">73</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.55</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.06</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.48</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.08</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.52</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.1</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.4</td>
<td align="center" valign="middle" rowspan="1" colspan="1">0.03</td>
</tr>
<tr>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">MERS-HR2P</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">−0.2</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">105</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">12</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">29</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">14</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">1.07</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">0.22</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">1.14</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">0.02</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">1.71</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">0.02</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">1.31</td>
<td align="center" valign="middle" style="border-bottom:solid thin" rowspan="1" colspan="1">0.07</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>IC
<sub>50</sub>
: Concentration of peptide at which 50% of HCoV S-mediated cell–cell fusion was blocked.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</floats-group>
</pmc>
</record>

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