UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions
Identifieur interne : 000F52 ( Ncbi/Merge ); précédent : 000F51; suivant : 000F53UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions
Auteurs : Maxwell A. Hume [États-Unis] ; Luis A. Barrera [États-Unis] ; Stephen S. Gisselbrecht [États-Unis] ; Martha L. Bulyk [États-Unis]Source :
- Nucleic Acids Research [ 0305-1048 ] ; 2014.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- chemical , chemistry : DNA.
- chemical , metabolism : DNA, DNA-Binding Proteins, Transcription Factors.
- Algorithms, Databases, Protein, Internet, Nucleotide Motifs, Protein Array Analysis, Software.
Abstract
The Universal PBM Resource for Oligonucleotide Binding Evaluation (UniPROBE) serves as a convenient source of information on published data generated using universal protein-binding microarray (PBM) technology, which provides
Url:
DOI: 10.1093/nar/gku1045
PubMed: 25378322
PubMed Central: 4383892
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000F39
- to stream Pmc, to step Curation: 000F39
- to stream Pmc, to step Checkpoint: 000F38
- to stream PubMed, to step Corpus: 001795
- to stream PubMed, to step Curation: 001795
- to stream PubMed, to step Checkpoint: 001290
Links to Exploration step
PMC:4383892Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions</title>
<author><name sortKey="Hume, Maxwell A" sort="Hume, Maxwell A" uniqKey="Hume M" first="Maxwell A." last="Hume">Maxwell A. Hume</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF2">Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Barrera, Luis A" sort="Barrera, Luis A" uniqKey="Barrera L" first="Luis A." last="Barrera">Luis A. Barrera</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gisselbrecht, Stephen S" sort="Gisselbrecht, Stephen S" uniqKey="Gisselbrecht S" first="Stephen S." last="Gisselbrecht">Stephen S. Gisselbrecht</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Bulyk, Martha L" sort="Bulyk, Martha L" uniqKey="Bulyk M" first="Martha L." last="Bulyk">Martha L. Bulyk</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF5">Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">25378322</idno>
<idno type="pmc">4383892</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383892</idno>
<idno type="RBID">PMC:4383892</idno>
<idno type="doi">10.1093/nar/gku1045</idno>
<date when="2014">2014</date>
<idno type="wicri:Area/Pmc/Corpus">000F39</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000F39</idno>
<idno type="wicri:Area/Pmc/Curation">000F39</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000F39</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000F38</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000F38</idno>
<idno type="wicri:source">PubMed</idno>
<idno type="RBID">pubmed:25378322</idno>
<idno type="wicri:Area/PubMed/Corpus">001795</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001795</idno>
<idno type="wicri:Area/PubMed/Curation">001795</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001795</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001290</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001290</idno>
<idno type="wicri:Area/Ncbi/Merge">000F52</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions</title>
<author><name sortKey="Hume, Maxwell A" sort="Hume, Maxwell A" uniqKey="Hume M" first="Maxwell A." last="Hume">Maxwell A. Hume</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF2">Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Barrera, Luis A" sort="Barrera, Luis A" uniqKey="Barrera L" first="Luis A." last="Barrera">Luis A. Barrera</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gisselbrecht, Stephen S" sort="Gisselbrecht, Stephen S" uniqKey="Gisselbrecht S" first="Stephen S." last="Gisselbrecht">Stephen S. Gisselbrecht</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Bulyk, Martha L" sort="Bulyk, Martha L" uniqKey="Bulyk M" first="Martha L." last="Bulyk">Martha L. Bulyk</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF5">Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
</analytic>
<series><title level="j">Nucleic Acids Research</title>
<idno type="ISSN">0305-1048</idno>
<idno type="eISSN">1362-4962</idno>
<imprint><date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Algorithms</term>
<term>DNA (chemistry)</term>
<term>DNA (metabolism)</term>
<term>DNA-Binding Proteins (metabolism)</term>
<term>Databases, Protein</term>
<term>Internet</term>
<term>Nucleotide Motifs</term>
<term>Protein Array Analysis</term>
<term>Software</term>
<term>Transcription Factors (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN ()</term>
<term>ADN (métabolisme)</term>
<term>Algorithmes</term>
<term>Analyse par réseau de protéines</term>
<term>Bases de données de protéines</term>
<term>Facteurs de transcription (métabolisme)</term>
<term>Internet</term>
<term>Logiciel</term>
<term>Motifs nucléotidiques</term>
<term>Protéines de liaison à l'ADN (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>DNA</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>DNA</term>
<term>DNA-Binding Proteins</term>
<term>Transcription Factors</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>ADN</term>
<term>Facteurs de transcription</term>
<term>Protéines de liaison à l'ADN</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Algorithms</term>
<term>Databases, Protein</term>
<term>Internet</term>
<term>Nucleotide Motifs</term>
<term>Protein Array Analysis</term>
<term>Software</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>ADN</term>
<term>Algorithmes</term>
<term>Analyse par réseau de protéines</term>
<term>Bases de données de protéines</term>
<term>Internet</term>
<term>Logiciel</term>
<term>Motifs nucléotidiques</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p>The Universal PBM Resource for Oligonucleotide Binding Evaluation (UniPROBE) serves as a convenient source of information on published data generated using universal protein-binding microarray (PBM) technology, which provides <italic>in vitro</italic>
data about the relative DNA-binding preferences of transcription factors for all possible sequence variants of a length <italic>k</italic>
(‘<italic>k</italic>
-mers’). The database displays important information about the proteins and displays their DNA-binding specificity data in terms of <italic>k</italic>
-mers, position weight matrices and graphical sequence logos. This update to the database documents the growth of UniPROBE since the last update 4 years ago, and introduces a variety of new features and tools, including a new streamlined pipeline that facilitates data deposition by universal PBM data generators in the research community, a tool that generates putative nonbinding (i.e. negative control) DNA sequences for one or more proteins and novel motifs obtained by analyzing the PBM data using the BEEML-PBM algorithm for motif inference. The UniPROBE database is available at <ext-link ext-link-type="uri" xlink:href="http://uniprobe.org">http://uniprobe.org</ext-link>
.</p>
</div>
</front>
<back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Philippakis, A A" uniqKey="Philippakis A">A.A. Philippakis</name>
</author>
<author><name sortKey="Qureshi, A M" uniqKey="Qureshi A">A.M. Qureshi</name>
</author>
<author><name sortKey="He, F S" uniqKey="He F">F.S. He</name>
</author>
<author><name sortKey="Estep, P W" uniqKey="Estep P">P.W. Estep</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Newburger, D E" uniqKey="Newburger D">D.E. Newburger</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Robasky, K" uniqKey="Robasky K">K. Robasky</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Zhao, Y" uniqKey="Zhao Y">Y. Zhao</name>
</author>
<author><name sortKey="Stormo, G D" uniqKey="Stormo G">G.D. Stormo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Alibes, A" uniqKey="Alibes A">A. Alibés</name>
</author>
<author><name sortKey="Nadra, A D" uniqKey="Nadra A">A.D. Nadra</name>
</author>
<author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Serrano, L" uniqKey="Serrano L">L. Serrano</name>
</author>
<author><name sortKey="Stricher, F" uniqKey="Stricher F">F. Stricher</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Campbell, T L" uniqKey="Campbell T">T.L. Campbell</name>
</author>
<author><name sortKey="De Silva, E K" uniqKey="De Silva E">E.K. De Silva</name>
</author>
<author><name sortKey="Olszewski, K L" uniqKey="Olszewski K">K.L. Olszewski</name>
</author>
<author><name sortKey="Elemento, O" uniqKey="Elemento O">O. Elemento</name>
</author>
<author><name sortKey="Llinas, M" uniqKey="Llinas M">M. Llinás</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Gordan, R" uniqKey="Gordan R">R. Gordân</name>
</author>
<author><name sortKey="Murphy, K F" uniqKey="Murphy K">K.F. Murphy</name>
</author>
<author><name sortKey="Mccord, R P" uniqKey="Mccord R">R.P. McCord</name>
</author>
<author><name sortKey="Zhu, C" uniqKey="Zhu C">C. Zhu</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Del Bianco, C" uniqKey="Del Bianco C">C. Del Bianco</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Choi, S H" uniqKey="Choi S">S.H. Choi</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Blacklow, S C" uniqKey="Blacklow S">S.C. Blacklow</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Cheatle Jarvela, A M" uniqKey="Cheatle Jarvela A">A.M. Cheatle Jarvela</name>
</author>
<author><name sortKey="Brubaker, L" uniqKey="Brubaker L">L. Brubaker</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Gupta, A" uniqKey="Gupta A">A. Gupta</name>
</author>
<author><name sortKey="Armitage, B A" uniqKey="Armitage B">B.A. Armitage</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Hinman, V F" uniqKey="Hinman V">V.F. Hinman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Busser, B W" uniqKey="Busser B">B.W. Busser</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Jaeger, S A" uniqKey="Jaeger S">S.A. Jaeger</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Singhania, A" uniqKey="Singhania A">A. Singhania</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Zhou, B" uniqKey="Zhou B">B. Zhou</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Michelson, A M" uniqKey="Michelson A">A.M. Michelson</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Nakagawa, S" uniqKey="Nakagawa S">S. Nakagawa</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Rogers, J M" uniqKey="Rogers J">J.M. Rogers</name>
</author>
<author><name sortKey="Hartl, D L" uniqKey="Hartl D">D.L. Hartl</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Soruco, M M" uniqKey="Soruco M">M.M. Soruco</name>
</author>
<author><name sortKey="Chery, J" uniqKey="Chery J">J. Chery</name>
</author>
<author><name sortKey="Bishop, E P" uniqKey="Bishop E">E.P. Bishop</name>
</author>
<author><name sortKey="Siggers, T" uniqKey="Siggers T">T. Siggers</name>
</author>
<author><name sortKey="Tolstorukov, M Y" uniqKey="Tolstorukov M">M.Y. Tolstorukov</name>
</author>
<author><name sortKey="Leydon, A R" uniqKey="Leydon A">A.R. Leydon</name>
</author>
<author><name sortKey="Sugden, A U" uniqKey="Sugden A">A.U. Sugden</name>
</author>
<author><name sortKey="Goebel, K" uniqKey="Goebel K">K. Goebel</name>
</author>
<author><name sortKey="Feng, J" uniqKey="Feng J">J. Feng</name>
</author>
<author><name sortKey="Xia, P" uniqKey="Xia P">P. Xia</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Busser, B W" uniqKey="Busser B">B.W. Busser</name>
</author>
<author><name sortKey="Huang, D" uniqKey="Huang D">D. Huang</name>
</author>
<author><name sortKey="Rogacki, K R" uniqKey="Rogacki K">K.R. Rogacki</name>
</author>
<author><name sortKey="Lane, E A" uniqKey="Lane E">E.A. Lane</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Ni, T" uniqKey="Ni T">T. Ni</name>
</author>
<author><name sortKey="Gamble, C E" uniqKey="Gamble C">C.E. Gamble</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Zhu, J" uniqKey="Zhu J">J. Zhu</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Peterson, K A" uniqKey="Peterson K">K.A. Peterson</name>
</author>
<author><name sortKey="Nishi, Y" uniqKey="Nishi Y">Y. Nishi</name>
</author>
<author><name sortKey="Ma, W" uniqKey="Ma W">W. Ma</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Zhang, X" uniqKey="Zhang X">X. Zhang</name>
</author>
<author><name sortKey="Mcfarlane, M" uniqKey="Mcfarlane M">M. McFarlane</name>
</author>
<author><name sortKey="Baizabal, J M" uniqKey="Baizabal J">J.M. Baizabal</name>
</author>
<author><name sortKey="Junker, J P" uniqKey="Junker J">J.P. Junker</name>
</author>
<author><name sortKey="Van Oudenaarden, A" uniqKey="Van Oudenaarden A">A. van Oudenaarden</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
<author><name sortKey="Grove, C A" uniqKey="Grove C">C.A. Grove</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Alibes, A" uniqKey="Alibes A">A. Alibés</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Serrano, L" uniqKey="Serrano L">L. Serrano</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Walhout, A J" uniqKey="Walhout A">A.J. Walhout</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Helfer, A" uniqKey="Helfer A">A. Helfer</name>
</author>
<author><name sortKey="Nusinow, D A" uniqKey="Nusinow D">D.A. Nusinow</name>
</author>
<author><name sortKey="Chow, B Y" uniqKey="Chow B">B.Y. Chow</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Kay, S A" uniqKey="Kay S">S.A. Kay</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Nowak Lovato, K L" uniqKey="Nowak Lovato K">K.L. Nowak-Lovato</name>
</author>
<author><name sortKey="Hickmott, A J" uniqKey="Hickmott A">A.J. Hickmott</name>
</author>
<author><name sortKey="Maity, T S" uniqKey="Maity T">T.S. Maity</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Dunbar, J" uniqKey="Dunbar J">J. Dunbar</name>
</author>
<author><name sortKey="Hong Geller, E" uniqKey="Hong Geller E">E. Hong-Geller</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Weirauch, M T" uniqKey="Weirauch M">M.T. Weirauch</name>
</author>
<author><name sortKey="Cote, A" uniqKey="Cote A">A. Cote</name>
</author>
<author><name sortKey="Norel, R" uniqKey="Norel R">R. Norel</name>
</author>
<author><name sortKey="Annala, M" uniqKey="Annala M">M. Annala</name>
</author>
<author><name sortKey="Zhao, Y" uniqKey="Zhao Y">Y. Zhao</name>
</author>
<author><name sortKey="Riley, T R" uniqKey="Riley T">T.R. Riley</name>
</author>
<author><name sortKey="Saez Rodriguez, J" uniqKey="Saez Rodriguez J">J. Saez-Rodriguez</name>
</author>
<author><name sortKey="Cokelaer, T" uniqKey="Cokelaer T">T. Cokelaer</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Talukder, S" uniqKey="Talukder S">S. Talukder</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Siggers, T" uniqKey="Siggers T">T. Siggers</name>
</author>
<author><name sortKey="Reddy, J" uniqKey="Reddy J">J. Reddy</name>
</author>
<author><name sortKey="Barron, B" uniqKey="Barron B">B. Barron</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lindemose, S" uniqKey="Lindemose S">S. Lindemose</name>
</author>
<author><name sortKey="Jensen, M K" uniqKey="Jensen M">M.K. Jensen</name>
</author>
<author><name sortKey="De Velde, J V" uniqKey="De Velde J">J.V. de Velde</name>
</author>
<author><name sortKey="O Shea, C" uniqKey="O Shea C">C. O'Shea</name>
</author>
<author><name sortKey="Heyndrickx, K S" uniqKey="Heyndrickx K">K.S. Heyndrickx</name>
</author>
<author><name sortKey="Workman, C T" uniqKey="Workman C">C.T. Workman</name>
</author>
<author><name sortKey="Vandepoele, K" uniqKey="Vandepoele K">K. Vandepoele</name>
</author>
<author><name sortKey="Skriver, K" uniqKey="Skriver K">K. Skriver</name>
</author>
<author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Oberstaller, J" uniqKey="Oberstaller J">J. Oberstaller</name>
</author>
<author><name sortKey="Pumpalova, Y" uniqKey="Pumpalova Y">Y. Pumpalova</name>
</author>
<author><name sortKey="Schieler, A" uniqKey="Schieler A">A. Schieler</name>
</author>
<author><name sortKey="Llinas, M" uniqKey="Llinas M">M. Llinás</name>
</author>
<author><name sortKey="Kissinger, J C" uniqKey="Kissinger J">J.C. Kissinger</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Stormo, G D" uniqKey="Stormo G">G.D. Stormo</name>
</author>
<author><name sortKey="Schneider, T D" uniqKey="Schneider T">T.D. Schneider</name>
</author>
<author><name sortKey="Gold, L" uniqKey="Gold L">L. Gold</name>
</author>
<author><name sortKey="Ehrenfeucht, A" uniqKey="Ehrenfeucht A">A. Ehrenfeucht</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Stormo, G D" uniqKey="Stormo G">G.D. Stormo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Schneider, T D" uniqKey="Schneider T">T.D. Schneider</name>
</author>
<author><name sortKey="Stephens, R M" uniqKey="Stephens R">R.M. Stephens</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Badis, G" uniqKey="Badis G">G. Badis</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Talukder, S" uniqKey="Talukder S">S. Talukder</name>
</author>
<author><name sortKey="Philippakis, A A" uniqKey="Philippakis A">A.A. Philippakis</name>
</author>
<author><name sortKey="Pena Castillo, L" uniqKey="Pena Castillo L">L. Pena-Castillo</name>
</author>
<author><name sortKey="Alleyne, T M" uniqKey="Alleyne T">T.M. Alleyne</name>
</author>
<author><name sortKey="Mnaimneh, S" uniqKey="Mnaimneh S">S. Mnaimneh</name>
</author>
<author><name sortKey="Botvinnik, O B" uniqKey="Botvinnik O">O.B. Botvinnik</name>
</author>
<author><name sortKey="Chan, E T" uniqKey="Chan E">E.T. Chan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Zhu, C" uniqKey="Zhu C">C. Zhu</name>
</author>
<author><name sortKey="Byers, K J" uniqKey="Byers K">K.J. Byers</name>
</author>
<author><name sortKey="Mccord, R P" uniqKey="Mccord R">R.P. McCord</name>
</author>
<author><name sortKey="Shi, Z" uniqKey="Shi Z">Z. Shi</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Newburger, D E" uniqKey="Newburger D">D.E. Newburger</name>
</author>
<author><name sortKey="Saulrieta, K" uniqKey="Saulrieta K">K. Saulrieta</name>
</author>
<author><name sortKey="Smith, Z" uniqKey="Smith Z">Z. Smith</name>
</author>
<author><name sortKey="Shah, M V" uniqKey="Shah M">M.V. Shah</name>
</author>
<author><name sortKey="Radhakrishnan, M" uniqKey="Radhakrishnan M">M. Radhakrishnan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Badis, G" uniqKey="Badis G">G. Badis</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Philippakis, A A" uniqKey="Philippakis A">A.A. Philippakis</name>
</author>
<author><name sortKey="Talukder, S" uniqKey="Talukder S">S. Talukder</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Jaeger, S A" uniqKey="Jaeger S">S.A. Jaeger</name>
</author>
<author><name sortKey="Chan, E T" uniqKey="Chan E">E.T. Chan</name>
</author>
<author><name sortKey="Metzler, G" uniqKey="Metzler G">G. Metzler</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Chen, X" uniqKey="Chen X">X. Chen</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Grove, C A" uniqKey="Grove C">C.A. Grove</name>
</author>
<author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
<author><name sortKey="Barrasa, M I" uniqKey="Barrasa M">M.I. Barrasa</name>
</author>
<author><name sortKey="Newburger, D E" uniqKey="Newburger D">D.E. Newburger</name>
</author>
<author><name sortKey="Alkema, M J" uniqKey="Alkema M">M.J. Alkema</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Walhout, A J" uniqKey="Walhout A">A.J. Walhout</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lesch, B J" uniqKey="Lesch B">B.J. Lesch</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Bargmann, C I" uniqKey="Bargmann C">C.I. Bargmann</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Wei, G H" uniqKey="Wei G">G.H. Wei</name>
</author>
<author><name sortKey="Badis, G" uniqKey="Badis G">G. Badis</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Kivioja, T" uniqKey="Kivioja T">T. Kivioja</name>
</author>
<author><name sortKey="Palin, K" uniqKey="Palin K">K. Palin</name>
</author>
<author><name sortKey="Enge, M" uniqKey="Enge M">M. Enge</name>
</author>
<author><name sortKey="Bonke, M" uniqKey="Bonke M">M. Bonke</name>
</author>
<author><name sortKey="Jolma, A" uniqKey="Jolma A">A. Jolma</name>
</author>
<author><name sortKey="Varjosalo, M" uniqKey="Varjosalo M">M. Varjosalo</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Scharer, C D" uniqKey="Scharer C">C.D. Scharer</name>
</author>
<author><name sortKey="Mccabe, C D" uniqKey="Mccabe C">C.D. McCabe</name>
</author>
<author><name sortKey="Ali Seyed, M" uniqKey="Ali Seyed M">M. Ali-Seyed</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Moreno, C S" uniqKey="Moreno C">C.S. Moreno</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Yang, L" uniqKey="Yang L">L. Yang</name>
</author>
<author><name sortKey="Zhou, T" uniqKey="Zhou T">T. Zhou</name>
</author>
<author><name sortKey="Dror, I" uniqKey="Dror I">I. Dror</name>
</author>
<author><name sortKey="Mathelier, A" uniqKey="Mathelier A">A. Mathelier</name>
</author>
<author><name sortKey="Wasserman, W W" uniqKey="Wasserman W">W.W. Wasserman</name>
</author>
<author><name sortKey="Gordan, R" uniqKey="Gordan R">R. Gordân</name>
</author>
<author><name sortKey="Rohs, R" uniqKey="Rohs R">R. Rohs</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sandelin, A" uniqKey="Sandelin A">A. Sandelin</name>
</author>
<author><name sortKey="Alkema, W" uniqKey="Alkema W">W. Alkema</name>
</author>
<author><name sortKey="Engstrom, P" uniqKey="Engstrom P">P. Engstrom</name>
</author>
<author><name sortKey="Wasserman, W W" uniqKey="Wasserman W">W.W. Wasserman</name>
</author>
<author><name sortKey="Lenhard, B" uniqKey="Lenhard B">B. Lenhard</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Mathelier, A" uniqKey="Mathelier A">A. Mathelier</name>
</author>
<author><name sortKey="Zhao, X" uniqKey="Zhao X">X. Zhao</name>
</author>
<author><name sortKey="Zhang, A W" uniqKey="Zhang A">A.W. Zhang</name>
</author>
<author><name sortKey="Parcy, F" uniqKey="Parcy F">F. Parcy</name>
</author>
<author><name sortKey="Worsley Hunt, R" uniqKey="Worsley Hunt R">R. Worsley-Hunt</name>
</author>
<author><name sortKey="Arenillas, D J" uniqKey="Arenillas D">D.J. Arenillas</name>
</author>
<author><name sortKey="Buchman, S" uniqKey="Buchman S">S. Buchman</name>
</author>
<author><name sortKey="Chen, C Y" uniqKey="Chen C">C.Y. Chen</name>
</author>
<author><name sortKey="Chou, A" uniqKey="Chou A">A. Chou</name>
</author>
<author><name sortKey="Ienasescu, H" uniqKey="Ienasescu H">H. Ienasescu</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Foat, B C" uniqKey="Foat B">B.C. Foat</name>
</author>
<author><name sortKey="Morozov, A V" uniqKey="Morozov A">A.V. Morozov</name>
</author>
<author><name sortKey="Bussemaker, H J" uniqKey="Bussemaker H">H.J. Bussemaker</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<double pmid="25378322"><pmc><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions</title>
<author><name sortKey="Hume, Maxwell A" sort="Hume, Maxwell A" uniqKey="Hume M" first="Maxwell A." last="Hume">Maxwell A. Hume</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF2">Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Barrera, Luis A" sort="Barrera, Luis A" uniqKey="Barrera L" first="Luis A." last="Barrera">Luis A. Barrera</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gisselbrecht, Stephen S" sort="Gisselbrecht, Stephen S" uniqKey="Gisselbrecht S" first="Stephen S." last="Gisselbrecht">Stephen S. Gisselbrecht</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Bulyk, Martha L" sort="Bulyk, Martha L" uniqKey="Bulyk M" first="Martha L." last="Bulyk">Martha L. Bulyk</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF5">Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">25378322</idno>
<idno type="pmc">4383892</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383892</idno>
<idno type="RBID">PMC:4383892</idno>
<idno type="doi">10.1093/nar/gku1045</idno>
<date when="2014">2014</date>
<idno type="wicri:Area/Pmc/Corpus">000F39</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000F39</idno>
<idno type="wicri:Area/Pmc/Curation">000F39</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000F39</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000F38</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000F38</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions</title>
<author><name sortKey="Hume, Maxwell A" sort="Hume, Maxwell A" uniqKey="Hume M" first="Maxwell A." last="Hume">Maxwell A. Hume</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF2">Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Barrera, Luis A" sort="Barrera, Luis A" uniqKey="Barrera L" first="Luis A." last="Barrera">Luis A. Barrera</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gisselbrecht, Stephen S" sort="Gisselbrecht, Stephen S" uniqKey="Gisselbrecht S" first="Stephen S." last="Gisselbrecht">Stephen S. Gisselbrecht</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Bulyk, Martha L" sort="Bulyk, Martha L" uniqKey="Bulyk M" first="Martha L." last="Bulyk">Martha L. Bulyk</name>
<affiliation wicri:level="2"><nlm:aff id="AFF1">Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><nlm:aff id="AFF3">Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF4">Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="AFF5">Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
</analytic>
<series><title level="j">Nucleic Acids Research</title>
<idno type="ISSN">0305-1048</idno>
<idno type="eISSN">1362-4962</idno>
<imprint><date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p>The Universal PBM Resource for Oligonucleotide Binding Evaluation (UniPROBE) serves as a convenient source of information on published data generated using universal protein-binding microarray (PBM) technology, which provides <italic>in vitro</italic>
data about the relative DNA-binding preferences of transcription factors for all possible sequence variants of a length <italic>k</italic>
(‘<italic>k</italic>
-mers’). The database displays important information about the proteins and displays their DNA-binding specificity data in terms of <italic>k</italic>
-mers, position weight matrices and graphical sequence logos. This update to the database documents the growth of UniPROBE since the last update 4 years ago, and introduces a variety of new features and tools, including a new streamlined pipeline that facilitates data deposition by universal PBM data generators in the research community, a tool that generates putative nonbinding (i.e. negative control) DNA sequences for one or more proteins and novel motifs obtained by analyzing the PBM data using the BEEML-PBM algorithm for motif inference. The UniPROBE database is available at <ext-link ext-link-type="uri" xlink:href="http://uniprobe.org">http://uniprobe.org</ext-link>
.</p>
</div>
</front>
<back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Philippakis, A A" uniqKey="Philippakis A">A.A. Philippakis</name>
</author>
<author><name sortKey="Qureshi, A M" uniqKey="Qureshi A">A.M. Qureshi</name>
</author>
<author><name sortKey="He, F S" uniqKey="He F">F.S. He</name>
</author>
<author><name sortKey="Estep, P W" uniqKey="Estep P">P.W. Estep</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Newburger, D E" uniqKey="Newburger D">D.E. Newburger</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Robasky, K" uniqKey="Robasky K">K. Robasky</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Zhao, Y" uniqKey="Zhao Y">Y. Zhao</name>
</author>
<author><name sortKey="Stormo, G D" uniqKey="Stormo G">G.D. Stormo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Alibes, A" uniqKey="Alibes A">A. Alibés</name>
</author>
<author><name sortKey="Nadra, A D" uniqKey="Nadra A">A.D. Nadra</name>
</author>
<author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Serrano, L" uniqKey="Serrano L">L. Serrano</name>
</author>
<author><name sortKey="Stricher, F" uniqKey="Stricher F">F. Stricher</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Campbell, T L" uniqKey="Campbell T">T.L. Campbell</name>
</author>
<author><name sortKey="De Silva, E K" uniqKey="De Silva E">E.K. De Silva</name>
</author>
<author><name sortKey="Olszewski, K L" uniqKey="Olszewski K">K.L. Olszewski</name>
</author>
<author><name sortKey="Elemento, O" uniqKey="Elemento O">O. Elemento</name>
</author>
<author><name sortKey="Llinas, M" uniqKey="Llinas M">M. Llinás</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Gordan, R" uniqKey="Gordan R">R. Gordân</name>
</author>
<author><name sortKey="Murphy, K F" uniqKey="Murphy K">K.F. Murphy</name>
</author>
<author><name sortKey="Mccord, R P" uniqKey="Mccord R">R.P. McCord</name>
</author>
<author><name sortKey="Zhu, C" uniqKey="Zhu C">C. Zhu</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Del Bianco, C" uniqKey="Del Bianco C">C. Del Bianco</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Choi, S H" uniqKey="Choi S">S.H. Choi</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Blacklow, S C" uniqKey="Blacklow S">S.C. Blacklow</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Cheatle Jarvela, A M" uniqKey="Cheatle Jarvela A">A.M. Cheatle Jarvela</name>
</author>
<author><name sortKey="Brubaker, L" uniqKey="Brubaker L">L. Brubaker</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Gupta, A" uniqKey="Gupta A">A. Gupta</name>
</author>
<author><name sortKey="Armitage, B A" uniqKey="Armitage B">B.A. Armitage</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Hinman, V F" uniqKey="Hinman V">V.F. Hinman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Busser, B W" uniqKey="Busser B">B.W. Busser</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Jaeger, S A" uniqKey="Jaeger S">S.A. Jaeger</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Singhania, A" uniqKey="Singhania A">A. Singhania</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Zhou, B" uniqKey="Zhou B">B. Zhou</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Michelson, A M" uniqKey="Michelson A">A.M. Michelson</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Nakagawa, S" uniqKey="Nakagawa S">S. Nakagawa</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Rogers, J M" uniqKey="Rogers J">J.M. Rogers</name>
</author>
<author><name sortKey="Hartl, D L" uniqKey="Hartl D">D.L. Hartl</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Soruco, M M" uniqKey="Soruco M">M.M. Soruco</name>
</author>
<author><name sortKey="Chery, J" uniqKey="Chery J">J. Chery</name>
</author>
<author><name sortKey="Bishop, E P" uniqKey="Bishop E">E.P. Bishop</name>
</author>
<author><name sortKey="Siggers, T" uniqKey="Siggers T">T. Siggers</name>
</author>
<author><name sortKey="Tolstorukov, M Y" uniqKey="Tolstorukov M">M.Y. Tolstorukov</name>
</author>
<author><name sortKey="Leydon, A R" uniqKey="Leydon A">A.R. Leydon</name>
</author>
<author><name sortKey="Sugden, A U" uniqKey="Sugden A">A.U. Sugden</name>
</author>
<author><name sortKey="Goebel, K" uniqKey="Goebel K">K. Goebel</name>
</author>
<author><name sortKey="Feng, J" uniqKey="Feng J">J. Feng</name>
</author>
<author><name sortKey="Xia, P" uniqKey="Xia P">P. Xia</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Busser, B W" uniqKey="Busser B">B.W. Busser</name>
</author>
<author><name sortKey="Huang, D" uniqKey="Huang D">D. Huang</name>
</author>
<author><name sortKey="Rogacki, K R" uniqKey="Rogacki K">K.R. Rogacki</name>
</author>
<author><name sortKey="Lane, E A" uniqKey="Lane E">E.A. Lane</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Ni, T" uniqKey="Ni T">T. Ni</name>
</author>
<author><name sortKey="Gamble, C E" uniqKey="Gamble C">C.E. Gamble</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Zhu, J" uniqKey="Zhu J">J. Zhu</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Peterson, K A" uniqKey="Peterson K">K.A. Peterson</name>
</author>
<author><name sortKey="Nishi, Y" uniqKey="Nishi Y">Y. Nishi</name>
</author>
<author><name sortKey="Ma, W" uniqKey="Ma W">W. Ma</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Shokri, L" uniqKey="Shokri L">L. Shokri</name>
</author>
<author><name sortKey="Zhang, X" uniqKey="Zhang X">X. Zhang</name>
</author>
<author><name sortKey="Mcfarlane, M" uniqKey="Mcfarlane M">M. McFarlane</name>
</author>
<author><name sortKey="Baizabal, J M" uniqKey="Baizabal J">J.M. Baizabal</name>
</author>
<author><name sortKey="Junker, J P" uniqKey="Junker J">J.P. Junker</name>
</author>
<author><name sortKey="Van Oudenaarden, A" uniqKey="Van Oudenaarden A">A. van Oudenaarden</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
<author><name sortKey="Grove, C A" uniqKey="Grove C">C.A. Grove</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Alibes, A" uniqKey="Alibes A">A. Alibés</name>
</author>
<author><name sortKey="Gisselbrecht, S S" uniqKey="Gisselbrecht S">S.S. Gisselbrecht</name>
</author>
<author><name sortKey="Serrano, L" uniqKey="Serrano L">L. Serrano</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Walhout, A J" uniqKey="Walhout A">A.J. Walhout</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Helfer, A" uniqKey="Helfer A">A. Helfer</name>
</author>
<author><name sortKey="Nusinow, D A" uniqKey="Nusinow D">D.A. Nusinow</name>
</author>
<author><name sortKey="Chow, B Y" uniqKey="Chow B">B.Y. Chow</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Kay, S A" uniqKey="Kay S">S.A. Kay</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Nowak Lovato, K L" uniqKey="Nowak Lovato K">K.L. Nowak-Lovato</name>
</author>
<author><name sortKey="Hickmott, A J" uniqKey="Hickmott A">A.J. Hickmott</name>
</author>
<author><name sortKey="Maity, T S" uniqKey="Maity T">T.S. Maity</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Dunbar, J" uniqKey="Dunbar J">J. Dunbar</name>
</author>
<author><name sortKey="Hong Geller, E" uniqKey="Hong Geller E">E. Hong-Geller</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Weirauch, M T" uniqKey="Weirauch M">M.T. Weirauch</name>
</author>
<author><name sortKey="Cote, A" uniqKey="Cote A">A. Cote</name>
</author>
<author><name sortKey="Norel, R" uniqKey="Norel R">R. Norel</name>
</author>
<author><name sortKey="Annala, M" uniqKey="Annala M">M. Annala</name>
</author>
<author><name sortKey="Zhao, Y" uniqKey="Zhao Y">Y. Zhao</name>
</author>
<author><name sortKey="Riley, T R" uniqKey="Riley T">T.R. Riley</name>
</author>
<author><name sortKey="Saez Rodriguez, J" uniqKey="Saez Rodriguez J">J. Saez-Rodriguez</name>
</author>
<author><name sortKey="Cokelaer, T" uniqKey="Cokelaer T">T. Cokelaer</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Talukder, S" uniqKey="Talukder S">S. Talukder</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Siggers, T" uniqKey="Siggers T">T. Siggers</name>
</author>
<author><name sortKey="Reddy, J" uniqKey="Reddy J">J. Reddy</name>
</author>
<author><name sortKey="Barron, B" uniqKey="Barron B">B. Barron</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lindemose, S" uniqKey="Lindemose S">S. Lindemose</name>
</author>
<author><name sortKey="Jensen, M K" uniqKey="Jensen M">M.K. Jensen</name>
</author>
<author><name sortKey="De Velde, J V" uniqKey="De Velde J">J.V. de Velde</name>
</author>
<author><name sortKey="O Shea, C" uniqKey="O Shea C">C. O'Shea</name>
</author>
<author><name sortKey="Heyndrickx, K S" uniqKey="Heyndrickx K">K.S. Heyndrickx</name>
</author>
<author><name sortKey="Workman, C T" uniqKey="Workman C">C.T. Workman</name>
</author>
<author><name sortKey="Vandepoele, K" uniqKey="Vandepoele K">K. Vandepoele</name>
</author>
<author><name sortKey="Skriver, K" uniqKey="Skriver K">K. Skriver</name>
</author>
<author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Oberstaller, J" uniqKey="Oberstaller J">J. Oberstaller</name>
</author>
<author><name sortKey="Pumpalova, Y" uniqKey="Pumpalova Y">Y. Pumpalova</name>
</author>
<author><name sortKey="Schieler, A" uniqKey="Schieler A">A. Schieler</name>
</author>
<author><name sortKey="Llinas, M" uniqKey="Llinas M">M. Llinás</name>
</author>
<author><name sortKey="Kissinger, J C" uniqKey="Kissinger J">J.C. Kissinger</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Stormo, G D" uniqKey="Stormo G">G.D. Stormo</name>
</author>
<author><name sortKey="Schneider, T D" uniqKey="Schneider T">T.D. Schneider</name>
</author>
<author><name sortKey="Gold, L" uniqKey="Gold L">L. Gold</name>
</author>
<author><name sortKey="Ehrenfeucht, A" uniqKey="Ehrenfeucht A">A. Ehrenfeucht</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Stormo, G D" uniqKey="Stormo G">G.D. Stormo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Schneider, T D" uniqKey="Schneider T">T.D. Schneider</name>
</author>
<author><name sortKey="Stephens, R M" uniqKey="Stephens R">R.M. Stephens</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Badis, G" uniqKey="Badis G">G. Badis</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Talukder, S" uniqKey="Talukder S">S. Talukder</name>
</author>
<author><name sortKey="Philippakis, A A" uniqKey="Philippakis A">A.A. Philippakis</name>
</author>
<author><name sortKey="Pena Castillo, L" uniqKey="Pena Castillo L">L. Pena-Castillo</name>
</author>
<author><name sortKey="Alleyne, T M" uniqKey="Alleyne T">T.M. Alleyne</name>
</author>
<author><name sortKey="Mnaimneh, S" uniqKey="Mnaimneh S">S. Mnaimneh</name>
</author>
<author><name sortKey="Botvinnik, O B" uniqKey="Botvinnik O">O.B. Botvinnik</name>
</author>
<author><name sortKey="Chan, E T" uniqKey="Chan E">E.T. Chan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Zhu, C" uniqKey="Zhu C">C. Zhu</name>
</author>
<author><name sortKey="Byers, K J" uniqKey="Byers K">K.J. Byers</name>
</author>
<author><name sortKey="Mccord, R P" uniqKey="Mccord R">R.P. McCord</name>
</author>
<author><name sortKey="Shi, Z" uniqKey="Shi Z">Z. Shi</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Newburger, D E" uniqKey="Newburger D">D.E. Newburger</name>
</author>
<author><name sortKey="Saulrieta, K" uniqKey="Saulrieta K">K. Saulrieta</name>
</author>
<author><name sortKey="Smith, Z" uniqKey="Smith Z">Z. Smith</name>
</author>
<author><name sortKey="Shah, M V" uniqKey="Shah M">M.V. Shah</name>
</author>
<author><name sortKey="Radhakrishnan, M" uniqKey="Radhakrishnan M">M. Radhakrishnan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Badis, G" uniqKey="Badis G">G. Badis</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Philippakis, A A" uniqKey="Philippakis A">A.A. Philippakis</name>
</author>
<author><name sortKey="Talukder, S" uniqKey="Talukder S">S. Talukder</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Jaeger, S A" uniqKey="Jaeger S">S.A. Jaeger</name>
</author>
<author><name sortKey="Chan, E T" uniqKey="Chan E">E.T. Chan</name>
</author>
<author><name sortKey="Metzler, G" uniqKey="Metzler G">G. Metzler</name>
</author>
<author><name sortKey="Vedenko, A" uniqKey="Vedenko A">A. Vedenko</name>
</author>
<author><name sortKey="Chen, X" uniqKey="Chen X">X. Chen</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Grove, C A" uniqKey="Grove C">C.A. Grove</name>
</author>
<author><name sortKey="De Masi, F" uniqKey="De Masi F">F. De Masi</name>
</author>
<author><name sortKey="Barrasa, M I" uniqKey="Barrasa M">M.I. Barrasa</name>
</author>
<author><name sortKey="Newburger, D E" uniqKey="Newburger D">D.E. Newburger</name>
</author>
<author><name sortKey="Alkema, M J" uniqKey="Alkema M">M.J. Alkema</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Walhout, A J" uniqKey="Walhout A">A.J. Walhout</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lesch, B J" uniqKey="Lesch B">B.J. Lesch</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Bargmann, C I" uniqKey="Bargmann C">C.I. Bargmann</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Wei, G H" uniqKey="Wei G">G.H. Wei</name>
</author>
<author><name sortKey="Badis, G" uniqKey="Badis G">G. Badis</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Kivioja, T" uniqKey="Kivioja T">T. Kivioja</name>
</author>
<author><name sortKey="Palin, K" uniqKey="Palin K">K. Palin</name>
</author>
<author><name sortKey="Enge, M" uniqKey="Enge M">M. Enge</name>
</author>
<author><name sortKey="Bonke, M" uniqKey="Bonke M">M. Bonke</name>
</author>
<author><name sortKey="Jolma, A" uniqKey="Jolma A">A. Jolma</name>
</author>
<author><name sortKey="Varjosalo, M" uniqKey="Varjosalo M">M. Varjosalo</name>
</author>
<author><name sortKey="Gehrke, A R" uniqKey="Gehrke A">A.R. Gehrke</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Scharer, C D" uniqKey="Scharer C">C.D. Scharer</name>
</author>
<author><name sortKey="Mccabe, C D" uniqKey="Mccabe C">C.D. McCabe</name>
</author>
<author><name sortKey="Ali Seyed, M" uniqKey="Ali Seyed M">M. Ali-Seyed</name>
</author>
<author><name sortKey="Berger, M F" uniqKey="Berger M">M.F. Berger</name>
</author>
<author><name sortKey="Bulyk, M L" uniqKey="Bulyk M">M.L. Bulyk</name>
</author>
<author><name sortKey="Moreno, C S" uniqKey="Moreno C">C.S. Moreno</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Yang, L" uniqKey="Yang L">L. Yang</name>
</author>
<author><name sortKey="Zhou, T" uniqKey="Zhou T">T. Zhou</name>
</author>
<author><name sortKey="Dror, I" uniqKey="Dror I">I. Dror</name>
</author>
<author><name sortKey="Mathelier, A" uniqKey="Mathelier A">A. Mathelier</name>
</author>
<author><name sortKey="Wasserman, W W" uniqKey="Wasserman W">W.W. Wasserman</name>
</author>
<author><name sortKey="Gordan, R" uniqKey="Gordan R">R. Gordân</name>
</author>
<author><name sortKey="Rohs, R" uniqKey="Rohs R">R. Rohs</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sandelin, A" uniqKey="Sandelin A">A. Sandelin</name>
</author>
<author><name sortKey="Alkema, W" uniqKey="Alkema W">W. Alkema</name>
</author>
<author><name sortKey="Engstrom, P" uniqKey="Engstrom P">P. Engstrom</name>
</author>
<author><name sortKey="Wasserman, W W" uniqKey="Wasserman W">W.W. Wasserman</name>
</author>
<author><name sortKey="Lenhard, B" uniqKey="Lenhard B">B. Lenhard</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Mathelier, A" uniqKey="Mathelier A">A. Mathelier</name>
</author>
<author><name sortKey="Zhao, X" uniqKey="Zhao X">X. Zhao</name>
</author>
<author><name sortKey="Zhang, A W" uniqKey="Zhang A">A.W. Zhang</name>
</author>
<author><name sortKey="Parcy, F" uniqKey="Parcy F">F. Parcy</name>
</author>
<author><name sortKey="Worsley Hunt, R" uniqKey="Worsley Hunt R">R. Worsley-Hunt</name>
</author>
<author><name sortKey="Arenillas, D J" uniqKey="Arenillas D">D.J. Arenillas</name>
</author>
<author><name sortKey="Buchman, S" uniqKey="Buchman S">S. Buchman</name>
</author>
<author><name sortKey="Chen, C Y" uniqKey="Chen C">C.Y. Chen</name>
</author>
<author><name sortKey="Chou, A" uniqKey="Chou A">A. Chou</name>
</author>
<author><name sortKey="Ienasescu, H" uniqKey="Ienasescu H">H. Ienasescu</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Foat, B C" uniqKey="Foat B">B.C. Foat</name>
</author>
<author><name sortKey="Morozov, A V" uniqKey="Morozov A">A.V. Morozov</name>
</author>
<author><name sortKey="Bussemaker, H J" uniqKey="Bussemaker H">H.J. Bussemaker</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
</pmc>
<pubmed><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions.</title>
<author><name sortKey="Hume, Maxwell A" sort="Hume, Maxwell A" uniqKey="Hume M" first="Maxwell A" last="Hume">Maxwell A. Hume</name>
<affiliation wicri:level="2"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Barrera, Luis A" sort="Barrera, Luis A" uniqKey="Barrera L" first="Luis A" last="Barrera">Luis A. Barrera</name>
<affiliation wicri:level="4"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
</author>
<author><name sortKey="Gisselbrecht, Stephen S" sort="Gisselbrecht, Stephen S" uniqKey="Gisselbrecht S" first="Stephen S" last="Gisselbrecht">Stephen S. Gisselbrecht</name>
<affiliation wicri:level="2"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Bulyk, Martha L" sort="Bulyk, Martha L" uniqKey="Bulyk M" first="Martha L" last="Bulyk">Martha L. Bulyk</name>
<affiliation wicri:level="4"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA mlbulyk@receptor.med.harvard.edu.</nlm:affiliation>
<country wicri:rule="url">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2015">2015</date>
<idno type="RBID">pubmed:25378322</idno>
<idno type="pmid">25378322</idno>
<idno type="doi">10.1093/nar/gku1045</idno>
<idno type="wicri:Area/PubMed/Corpus">001795</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001795</idno>
<idno type="wicri:Area/PubMed/Curation">001795</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001795</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001290</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001290</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions.</title>
<author><name sortKey="Hume, Maxwell A" sort="Hume, Maxwell A" uniqKey="Hume M" first="Maxwell A" last="Hume">Maxwell A. Hume</name>
<affiliation wicri:level="2"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Bioinformatics Graduate Program, Northeastern University, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Barrera, Luis A" sort="Barrera, Luis A" uniqKey="Barrera L" first="Luis A" last="Barrera">Luis A. Barrera</name>
<affiliation wicri:level="4"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
</author>
<author><name sortKey="Gisselbrecht, Stephen S" sort="Gisselbrecht, Stephen S" uniqKey="Gisselbrecht S" first="Stephen S" last="Gisselbrecht">Stephen S. Gisselbrecht</name>
<affiliation wicri:level="2"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Bulyk, Martha L" sort="Bulyk, Martha L" uniqKey="Bulyk M" first="Martha L" last="Bulyk">Martha L. Bulyk</name>
<affiliation wicri:level="4"><nlm:affiliation>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA mlbulyk@receptor.med.harvard.edu.</nlm:affiliation>
<country wicri:rule="url">États-Unis</country>
<wicri:regionArea>Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, MA 02138, USA Bioinformatics and Integrative Genomics Graduate Program, Harvard-MIT Division of Health Sciences and Technology, Harvard Medical School, Boston, MA 02115, USA Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115</wicri:regionArea>
<placeName><region type="state">Massachusetts</region>
<settlement type="city">Cambridge (Massachusetts)</settlement>
</placeName>
<orgName type="university">Université Harvard</orgName>
</affiliation>
</author>
</analytic>
<series><title level="j">Nucleic acids research</title>
<idno type="eISSN">1362-4962</idno>
<imprint><date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Algorithms</term>
<term>DNA (chemistry)</term>
<term>DNA (metabolism)</term>
<term>DNA-Binding Proteins (metabolism)</term>
<term>Databases, Protein</term>
<term>Internet</term>
<term>Nucleotide Motifs</term>
<term>Protein Array Analysis</term>
<term>Software</term>
<term>Transcription Factors (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN ()</term>
<term>ADN (métabolisme)</term>
<term>Algorithmes</term>
<term>Analyse par réseau de protéines</term>
<term>Bases de données de protéines</term>
<term>Facteurs de transcription (métabolisme)</term>
<term>Internet</term>
<term>Logiciel</term>
<term>Motifs nucléotidiques</term>
<term>Protéines de liaison à l'ADN (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>DNA</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>DNA</term>
<term>DNA-Binding Proteins</term>
<term>Transcription Factors</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>ADN</term>
<term>Facteurs de transcription</term>
<term>Protéines de liaison à l'ADN</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Algorithms</term>
<term>Databases, Protein</term>
<term>Internet</term>
<term>Nucleotide Motifs</term>
<term>Protein Array Analysis</term>
<term>Software</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>ADN</term>
<term>Algorithmes</term>
<term>Analyse par réseau de protéines</term>
<term>Bases de données de protéines</term>
<term>Internet</term>
<term>Logiciel</term>
<term>Motifs nucléotidiques</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The Universal PBM Resource for Oligonucleotide Binding Evaluation (UniPROBE) serves as a convenient source of information on published data generated using universal protein-binding microarray (PBM) technology, which provides in vitro data about the relative DNA-binding preferences of transcription factors for all possible sequence variants of a length k ('k-mers'). The database displays important information about the proteins and displays their DNA-binding specificity data in terms of k-mers, position weight matrices and graphical sequence logos. This update to the database documents the growth of UniPROBE since the last update 4 years ago, and introduces a variety of new features and tools, including a new streamlined pipeline that facilitates data deposition by universal PBM data generators in the research community, a tool that generates putative nonbinding (i.e. negative control) DNA sequences for one or more proteins and novel motifs obtained by analyzing the PBM data using the BEEML-PBM algorithm for motif inference. The UniPROBE database is available at http://uniprobe.org. </div>
</front>
</TEI>
</pubmed>
</double>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Ncbi/Merge
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000F52 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Ncbi/Merge/biblio.hfd -nk 000F52 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= MersV1 |flux= Ncbi |étape= Merge |type= RBID |clé= PMC:4383892 |texte= UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Ncbi/Merge/RBID.i -Sk "pubmed:25378322" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Ncbi/Merge/biblio.hfd \ | NlmPubMed2Wicri -a MersV1
![]() | This area was generated with Dilib version V0.6.33. | ![]() |