| Ident. | Authors (with country if any) | Title |
|---|
| 000236 (1992) |
P F Lehmann ; D. Lin ; B A Lasker | Genotypic identification and characterization of species and strains within the genus Candida by using random amplified polymorphic DNA. |
| 000729 (2010) |
Karina Yusim [États-Unis] ; William Fischer ; Hyejin Yoon ; James Thurmond ; Paul W. Fenimore ; Georg Lauer ; Bette Korber ; Carla Kuiken | Genotype 1 and global hepatitis C T-cell vaccines designed to optimize coverage of genetic diversity. |
| 000782 (2010) |
Stéphane Fenart [France] ; Yves-Placide Assoumou Ndong [France] ; Jorge Duarte [France] ; Nathalie Rivière [France] ; Jeroen Wilmer [France] ; Olivier Van Wuytswinkel [France] ; Anca Lucau [France] ; Emmanuelle Cariou [France] ; Godfrey Neutelings [France] ; Laurent Gutierrez [France] ; Brigitte Chabbert [France] ; Xavier Guillot [France] ; Reynald Tavernier [France] ; Simon Hawkins [France] ; Brigitte Thomasset [France] | Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray |
| 000930 (2012) |
Jennifer Monson-Miller [États-Unis] ; Diana C. Sanchez-Mendez [États-Unis] ; Joseph Fass [États-Unis] ; Isabelle M. Henry [États-Unis] ; Thomas H. Tai [États-Unis] ; Luca Comai [États-Unis] | Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing |
| 000C47 (2014) |
Pandurang Kolekar [Inde] ; Nilesh Hake [Inde] ; Mohan Kale [Inde] ; Urmila Kulkarni-Kale [Inde] | WNV Typer: a server for genotyping of West Nile viruses using an alignment-free method based on a return time distribution. |
| 000E14 (2014) |
Lilian Janin [Royaume-Uni] ; Ole Schulz-Trieglaff [Royaume-Uni] ; Anthony J. Cox [Royaume-Uni] | BEETL-fastq: a searchable compressed archive for DNA reads. |
| 001278 (2015) |
Diego Forni [Italie] ; Giulia Filippi [Italie] ; Rachele Cagliani [Italie] ; Luca De Gioia [Italie] ; Uberto Pozzoli [Italie] ; Nasser Al-Daghri ; Mario Clerici [Italie] ; Manuela Sironi [Italie] | The heptad repeat region is a major selection target in MERS-CoV and related coronaviruses |
| 001451 (2016) |
Diego Forni [Italie] ; Rachele Cagliani [Italie] ; Alessandra Mozzi [Italie] ; Uberto Pozzoli [Italie] ; Nasser Al-Daghri [Arabie saoudite] ; Mario Clerici [Italie] ; Manuela Sironi [Italie] | Extensive Positive Selection Drives the Evolution of Nonstructural Proteins in Lineage C Betacoronaviruses. |
| 001679 (2016) |
Daniel L. Greenfield [Royaume-Uni] ; Oliver Stegle [Royaume-Uni] ; Alban Rrustemi [Royaume-Uni] | GeneCodeq: quality score compression and improved genotyping using a Bayesian framework. |
| 001683 (2016) |
Philip T L C. Clausen [Danemark] ; Ea Zankari [Danemark] ; Frank M. Aarestrup [Danemark] ; Ole Lund [Danemark] | Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data. |
| 001765 (2016) |
Ariya Shajii [États-Unis] ; Deniz Yorukoglu ; Yun William Yu [États-Unis] ; Bonnie Berger [États-Unis] | Fast genotyping of known SNPs through approximate k-mer matching. |
| 001887 (2017) |
Dirk D. Dolle [Royaume-Uni] ; Zhicheng Liu [Royaume-Uni] ; Matthew Cotten [Royaume-Uni] ; Jared T. Simpson [Canada] ; Zamin Iqbal [Royaume-Uni] ; Richard Durbin [Royaume-Uni] ; Shane A. Mccarthy [Royaume-Uni] ; Thomas M. Keane [Royaume-Uni] | Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes. |
| 001986 (2017) |
Mohamed Ali [Égypte] ; Rabeh El-Shesheny [Égypte] ; Ahmed Kandeil [Égypte] ; Mahmoud Shehata [Égypte] ; Basma Elsokary [Égypte] ; Mokhtar Gomaa [Égypte] ; Naglaa Hassan [Égypte] ; Ahmed El Sayed [Égypte] ; Ahmed El-Taweel [Égypte] ; Heba Sobhy [Égypte] ; Fasina Folorunso Oludayo [Afrique du Sud] ; Gwenaelle Dauphin [Italie] ; Ihab El Masry [Égypte] ; Abebe Wossene Wolde [Égypte] ; Peter Daszak [États-Unis] ; Maureen Miller [États-Unis] ; Sophie Vondobschuetz [Italie] ; Emma Gardner [Italie] ; Subhash Morzaria [Italie] ; Juan Lubroth [Italie] ; Yilma Jobre Makonnen [Égypte] | Cross-sectional surveillance of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels and other mammals in Egypt, August 2015 to January 2016 |
| 001A00 (2017) |
Biao He [République populaire de Chine] ; Xiaohong Huang [République populaire de Chine] ; Fuqiang Zhang [République populaire de Chine] ; Weilong Tan [République populaire de Chine] ; Jelle Matthijnssens [Belgique] ; Shaomin Qin [République populaire de Chine] ; Lin Xu [République populaire de Chine] ; Zihan Zhao [République populaire de Chine] ; Ling'En Yang [République populaire de Chine] ; Quanxi Wang [République populaire de Chine] ; Tingsong Hu [République populaire de Chine] ; Xiaolei Bao [République populaire de Chine] ; Jianmin Wu [Oman] ; Changchun Tu [Oman] | Group A Rotaviruses in Chinese Bats: Genetic Composition, Serology, and Evidence for Bat-to-Human Transmission and Reassortment. |
| 001A56 (2017) |
Fanny-Dhelia Pajuste [Estonie] ; Lauris Kaplinski [Estonie] ; M Rt Möls [Estonie] ; Tarmo Puurand [Estonie] ; Maarja Lepamets [Estonie] ; Maido Remm [Estonie] | FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads |
| 001C39 (2017) |
Mohammed Farouk Yusof ; Krista Queen [États-Unis] ; Yassir Mohammed Eltahir ; Clinton R. Paden [États-Unis] ; Zulaikha Mohamed Abdel Hameed Al Hammadi ; Ying Tao [États-Unis] ; Yan Li [États-Unis] ; Abdelmalik Ibrahim Khalafalla ; Mang Shi [Australie] ; Jing Zhang [États-Unis] ; Muzammil Sayed Ahmed Elhaj Mohamed ; Mahmud Hamed Abd Elaal Ahmed ; Ihsaan Abdulwahab Azeez ; Oum Keltoum Bensalah ; Ziyada Swar Eldahab ; Farida Ismail Al Hosani ; Susan I. Gerber [États-Unis] ; Aron J. Hall [États-Unis] ; Suxiang Tong [États-Unis] ; Salama Suhail Al Muhairi | Diversity of Middle East respiratory syndrome coronaviruses in 109 dromedary camels based on full-genome sequencing, Abu Dhabi, United Arab Emirates |
| 001D08 (2018) |
Y J Yang [République populaire de Chine] ; Y W Hu [République populaire de Chine] | [Molecular epidemiological study of human coronavirus OC43 in Shanghai from 2009-2016]. |
| 001E70 (2018) |
Jonas Andreas Sibbesen [Danemark] ; Lasse Maretty [Danemark] ; Anders Krogh [Danemark] | Accurate genotyping across variant classes and lengths using variant graphs. |
| 002024 (2018) |
Stella Kiambi [Italie] ; Victor M. Corman [Allemagne] ; Rina Sitawa [Kenya] ; Jane Githinji [Kenya] ; James Ngoci [Kenya] ; Abdullahi S. Ozomata [Kenya] ; Emma Gardner [Italie] ; Sophie Von Dobschuetz [Italie] ; Subhash Morzaria [Italie] ; Joshua Kimutai [Italie] ; Simon Schroeder [Allemagne] ; Obadiah Njagi [Kenya] ; Piers Simpkin [Italie] ; Gabriel Rugalema [Italie] ; Zelalem Tadesse [Italie] ; Juan Lubroth [Italie] ; Yilma Makonnen [Italie] ; Christian Drosten [Allemagne] ; Marcel A. Müller [Allemagne] ; Folorunso O. Fasina [Italie] | Detection of distinct MERS-Coronavirus strains in dromedary camels from Kenya, 2017 |
| 002026 (2018) |
Guillaume Méric ; Leonardos Mageiros ; Johan Pensar [Finlande] ; Maisem Laabei [Suède] ; Koji Yahara [Japon] ; Ben Pascoe ; Nattinee Kittiwan [Thaïlande] ; Phacharaporn Tadee [Thaïlande] ; Virginia Post [Suisse] ; Sarah Lamble ; Rory Bowden ; James E. Bray ; Mario Morgenstern [Suisse] ; Keith A. Jolley ; Martin C. J. Maiden ; Edward J. Feil ; Xavier Didelot ; Maria Miragaia [Portugal] ; Herminia De Lencastre [Portugal, États-Unis] ; T. Fintan Moriarty [Suisse] ; Holger Rohde [Allemagne] ; Ruth Massey ; Dietrich Mack [Allemagne] ; Jukka Corander [Finlande, Norvège] ; Samuel K. Sheppard | Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis |
| 002156 (2019) |
Yeon-Sook Kim ; Abdimadiyeva Aigerim ; Uni Park ; Yuri Kim ; Ji-Young Rhee ; Jae-Phil Choi ; Wan Beom Park ; Sang Won Park ; Yeonjae Kim ; Dong-Gyun Lim ; Kyung-Soo Inn ; Eung-Soo Hwang ; Myung-Sik Choi ; Hyoung-Shik Shin ; Nam-Hyuk Cho | Sequential Emergence and Wide Spread of Neutralization Escape Middle East Respiratory Syndrome Coronavirus Mutants, South Korea, 2015. |
