1367-4803 < 1367-4811 < 1381-6128

Facettes : Author.f Mesh.f AffPays.f

List of bibliographic references

Number of relevant bibliographic references: 70.
[0-20] [0 - 20][0 - 50][20-40]

Ident.	Authors (with country if any)	Title
000448 (2006)	Thomas Lingner [Allemagne] ; Peter Meinicke	Remote homology detection based on oligomer distances.
000449 (2006)	Georgios S. Vernikos [Royaume-Uni] ; Julian Parkhill	Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands.
000453 (2006)	Eugene Fratkin [États-Unis] ; Brian T. Naughton ; Douglas L. Brutlag ; Serafim Batzoglou	MotifCut: regulatory motifs finding with maximum density subgraphs.
000454 (2006)	Tobias P. Mann [États-Unis] ; William Stafford Noble	Efficient identification of DNA hybridization partners in a sequence database.
000533 (2007)	Xiaoyu Chen [Canada] ; Timothy R. Hughes ; Quaid Morris	RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors.
000602 (2008)	James Thurmond [États-Unis] ; Hyejin Yoon ; Carla Kuiken ; Karina Yusim ; Simon Perkins ; James Theiler ; Tanmoy Bhattacharya ; Bette Korber ; Will Fischer	Web-based design and evaluation of T-cell vaccine candidates.
000773 (2010)	Xiao Yang [États-Unis] ; Karin S. Dorman ; Srinivas Aluru	Reptile: representative tiling for short read error correction.
000793 (2010)	Kana Shimizu ; Koji Tsuda [Japon]	SlideSort: all pairs similarity search for short reads
000799 (2011)	Guillaume Marçais [États-Unis] ; Carl Kingsford	A fast, lock-free approach for efficient parallel counting of occurrences of k-mers.
000871 (2011)	Peter Huggins [États-Unis] ; Shan Zhong ; Idit Shiff ; Rachel Beckerman ; Oleg Laptenko ; Carol Prives ; Marcel H. Schulz ; Itamar Simon ; Ziv Bar-Joseph	DECOD: fast and accurate discriminative DNA motif finding.
000948 (2012)	Yu Peng [Hong Kong] ; Henry C M. Leung ; S M Yiu ; Francis Y L. Chin	IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth.
000968 (2012)	Roy Ronen ; Christina Boucher [États-Unis] ; Hamidreza Chitsaz [États-Unis] ; Pavel Pevzner [États-Unis]	SEQuel: improving the accuracy of genome assemblies
000992 (2012)	Yi Wang ; Henry C. M. Leung ; S. M. Yiu ; Francis Y. L. Chin	MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample
000A02 (2012)	Robert A. Edwards [États-Unis] ; Robert Olson [États-Unis] ; Terry Disz [États-Unis] ; Gordon D. Pusch [États-Unis] ; Veronika Vonstein [États-Unis] ; Rick Stevens [États-Unis] ; Ross Overbeek [États-Unis]	Real Time Metagenomics: Using k-mers to annotate metagenomes
000A17 (2013)	Guillaume Rizk [France] ; Dominique Lavenier ; Rayan Chikhi	DSK: k-mer counting with very low memory usage.
000A34 (2013)	Bo Jiang [États-Unis] ; Jun S. Liu ; Martha L. Bulyk	Bayesian hierarchical model of protein-binding microarray k-mer data reduces noise and identifies transcription factor subclasses and preferred k-mers.
000A69 (2013)	Yaron Orenstein ; Ron Shamir	Design of shortest double-stranded DNA sequences covering all k-mers with applications to protein-binding microarrays and synthetic enhancers
000C40 (2014)	Kamil S. Jaron [République tchèque] ; Ji C. Moravec [République tchèque] ; Natália Martínková [République tchèque]	SigHunt: horizontal gene transfer finder optimized for eukaryotic genomes.
000D13 (2014)	Rajat Shuvro Roy [États-Unis] ; Debashish Bhattacharya [États-Unis] ; Alexander Schliep [États-Unis]	Turtle: identifying frequent k-mers with cache-efficient algorithms.
000D18 (2014)	Peter Audano ; Fredrik Vannberg	KAnalyze: a fast versatile pipelined K-mer toolkit
000D73 (2014)	Sohan Seth [Finlande] ; Niko V Lim Ki [Finlande] ; Samuel Kaski [Finlande] ; Antti Honkela [Finlande]	Exploration and retrieval of whole-metagenome sequencing samples

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