1470-8728 < 1471-2105 < 1471-213X

Facettes : Author.f Mesh.f AffPays.f

List of bibliographic references

Number of relevant bibliographic references: 53.
[20-40] [0 - 20][0 - 50][40-52][40-60]

Ident.	Authors (with country if any)	Title
000C74 (2014)	Marius Nicolae [États-Unis] ; Sanguthevar Rajasekaran [États-Unis]	Efficient sequential and parallel algorithms for planted motif search
000D97 (2014)	Refat Sharmin ; Abul Bashar Mir Md Khademul Islam	A highly conserved WDYPKCDRA epitope in the RNA directed RNA polymerase of human coronaviruses can be used as epitope-based universal vaccine design
000F41 (2014)	Mohammad Ali Moni [Bangladesh] ; Pietro Li	Network-based analysis of comorbidities risk during an infection: SARS and HIV case studies
001089 (2015)	Ruichang Zhang [République populaire de Chine] ; Zhanzhan Cheng [République populaire de Chine] ; Jihong Guan [République populaire de Chine] ; Shuigeng Zhou [République populaire de Chine]	Exploiting topic modeling to boost metagenomic reads binning
001105 (2015)	Massimo La Rosa [Italie] ; Antonino Fiannaca [Italie] ; Riccardo Rizzo [Italie] ; Alfonso Urso [Italie]	Probabilistic topic modeling for the analysis and classification of genomic sequences
001169 (2015)	Hilde Vinje ; Kristian Hovde Liland ; Trygve Alm Y ; Lars Snipen	Comparing K-mer based methods for improved classification of 16S sequences
001438 (2016)	Veronika B. Dubinkina [Russie] ; Dmitry S. Ischenko [Russie] ; Vladimir I. Ulyantsev [Russie] ; Alexander V. Tyakht [Russie] ; Dmitry G. Alexeev [Russie]	Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis
001903 (2017)	Robin Kobus [Allemagne] ; Christian Hundt [Allemagne] ; André Müller [Allemagne] ; Bertil Schmidt [Allemagne]	Accelerating metagenomic read classification on CUDA-enabled GPUs
001935 (2016)	Josep Basha Gutierrez [Japon] ; Kenta Nakai [Japon]	A study on the application of topic models to motif finding algorithms
001967 (2017)	Saghi Nojoomi [États-Unis] ; Patrice Koehl [États-Unis]	String kernels for protein sequence comparisons: improved fold recognition
001975 (2017)	Jin Chu Wu ; Michael Halter ; Raghu N. Kacker ; John T. Elliott ; Anne L. Plant	A novel measure and significance testing in data analysis of cell image segmentation
001976 (2017)	Malik Yousef [Israël] ; Waleed Khalifa [Israël] ; Lhan Erkin Acar ; Jens Allmer	MicroRNA categorization using sequence motifs and k-mers
001A99 (2017)	Axel Wedemeyer [Allemagne] ; Lasse Kliemann [Allemagne] ; Anand Srivastav [Allemagne] ; Christian Schielke [Allemagne] ; Thorsten B. Reusch [Allemagne] ; Philip Rosenstiel [Allemagne]	An improved filtering algorithm for big read datasets and its application to single-cell assembly
001C27 (2017)	Dinghua Li [Hong Kong] ; Yukun Huang [Hong Kong] ; Chi-Ming Leung [Hong Kong] ; Ruibang Luo [Hong Kong] ; Hing-Fung Ting [Hong Kong] ; Tak-Wah Lam [Hong Kong]	MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs
001C32 (2017)	Chang Sik Kim [Royaume-Uni] ; Martyn D. Winn ; Vipin Sachdeva [États-Unis] ; Kirk E. Jordan [États-Unis]	K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity
001C57 (2017)	Kosai Al-Nakeeb ; Thomas Nordahl Petersen ; Thomas Sicheritz-Pontén	Norgal: extraction and de novo assembly of mitochondrial DNA from whole-genome sequencing data
001D51 (2018)	Shuxiang Ruan ; Gary D. Stormo	Comparison of discriminative motif optimization using matrix and DNA shape-based models
001E18 (2018)	Jie Lin [République populaire de Chine] ; Jing Wei [République populaire de Chine] ; Donald Adjeroh [États-Unis] ; Bing-Hua Jiang ; Yue Jiang [République populaire de Chine]	SSAW: A new sequence similarity analysis method based on the stationary discrete wavelet transform
001E88 (2018)	Carl G. De Boer [États-Unis] ; Aviv Regev [États-Unis]	BROCKMAN: deciphering variance in epigenomic regulators by k-mer factorization
001F01 (2018)	Yasunobu Okamura ; Kengo Kinoshita	Matataki: an ultrafast mRNA quantification method for large-scale reanalysis of RNA-Seq data
001F15 (2018)	Igor Saggese [Italie] ; Elisa Bona [Italie] ; Max Conway ; Francesco Favero [Italie] ; Marco Ladetto [Italie] ; Pietro Li ; Giovanni Manzini [Italie] ; Flavio Mignone [Italie]	STAble: a novel approach to de novo assembly of RNA-seq data and its application in a metabolic model network based metatranscriptomic workflow

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