How independent are the appearances of n-mers in different genomes?
Identifieur interne : 000275 ( Ncbi/Checkpoint ); précédent : 000274; suivant : 000276How independent are the appearances of n-mers in different genomes?
Auteurs : Yuriy Fofanov [États-Unis] ; Yi Luo ; Charles Katili ; Jim Wang ; Yuri Belosludtsev ; Thomas Powdrill ; Chetan Belapurkar ; Viacheslav Fofanov ; Tong-Bin Li ; Sergey Chumakov ; B Montgomery PettittSource :
- Bioinformatics (Oxford, England) [ 1367-4803 ] ; 2004.
Descripteurs français
- KwdFr :
- Algorithmes, Alignement de séquences (), Analyse de séquence d'ADN (), Cartographie chromosomique (), Données de séquences moléculaires, Modèles génétiques, Modèles statistiques, Oligonucléotides (génétique), Profilage d'ADN (), Statistiques comme sujet, Séquence conservée (génétique), Séquence nucléotidique, Évolution moléculaire.
- MESH :
- génétique : Oligonucléotides, Séquence conservée.
- Algorithmes, Alignement de séquences, Analyse de séquence d'ADN, Cartographie chromosomique, Données de séquences moléculaires, Modèles génétiques, Modèles statistiques, Profilage d'ADN, Statistiques comme sujet, Séquence nucléotidique, Évolution moléculaire.
English descriptors
- KwdEn :
- Algorithms, Base Sequence, Chromosome Mapping (methods), Conserved Sequence (genetics), DNA Fingerprinting (methods), Evolution, Molecular, Models, Genetic, Models, Statistical, Molecular Sequence Data, Oligonucleotides (genetics), Sequence Alignment (methods), Sequence Analysis, DNA (methods), Statistics as Topic.
- MESH :
- chemical , genetics : Oligonucleotides.
- genetics : Conserved Sequence.
- methods : Chromosome Mapping, DNA Fingerprinting, Sequence Alignment, Sequence Analysis, DNA.
- Algorithms, Base Sequence, Evolution, Molecular, Models, Genetic, Models, Statistical, Molecular Sequence Data, Statistics as Topic.
Abstract
Analysis of statistical properties of DNA sequences is important for evolutional biology as well as for DNA probe and PCR technologies. These technologies, in turn, can be used for organism identification, which implies applications in the diagnosis of infectious diseases, environmental studies, etc.
DOI: 10.1093/bioinformatics/bth266
PubMed: 15087315
Affiliations:
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pubmed:15087315Le document en format XML
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<term>DNA Fingerprinting (methods)</term>
<term>Evolution, Molecular</term>
<term>Models, Genetic</term>
<term>Models, Statistical</term>
<term>Molecular Sequence Data</term>
<term>Oligonucleotides (genetics)</term>
<term>Sequence Alignment (methods)</term>
<term>Sequence Analysis, DNA (methods)</term>
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<term>Données de séquences moléculaires</term>
<term>Modèles génétiques</term>
<term>Modèles statistiques</term>
<term>Oligonucléotides (génétique)</term>
<term>Profilage d'ADN ()</term>
<term>Statistiques comme sujet</term>
<term>Séquence conservée (génétique)</term>
<term>Séquence nucléotidique</term>
<term>Évolution moléculaire</term>
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<term>Séquence conservée</term>
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<term>DNA Fingerprinting</term>
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<term>Models, Genetic</term>
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<term>Statistics as Topic</term>
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<term>Analyse de séquence d'ADN</term>
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<term>Données de séquences moléculaires</term>
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<term>Modèles statistiques</term>
<term>Profilage d'ADN</term>
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<front><div type="abstract" xml:lang="en">Analysis of statistical properties of DNA sequences is important for evolutional biology as well as for DNA probe and PCR technologies. These technologies, in turn, can be used for organism identification, which implies applications in the diagnosis of infectious diseases, environmental studies, etc.</div>
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<name sortKey="Belosludtsev, Yuri" sort="Belosludtsev, Yuri" uniqKey="Belosludtsev Y" first="Yuri" last="Belosludtsev">Yuri Belosludtsev</name>
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<name sortKey="Li, Tong Bin" sort="Li, Tong Bin" uniqKey="Li T" first="Tong-Bin" last="Li">Tong-Bin Li</name>
<name sortKey="Luo, Yi" sort="Luo, Yi" uniqKey="Luo Y" first="Yi" last="Luo">Yi Luo</name>
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<name sortKey="Wang, Jim" sort="Wang, Jim" uniqKey="Wang J" first="Jim" last="Wang">Jim Wang</name>
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