Serveur d'exploration MERS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Milligram-scale preparation and purification of oligosaccharides of defined length possessing the structure of chondroitin from defructosylated capsular polysaccharide K4.

Identifieur interne : 003241 ( Main/Merge ); précédent : 003240; suivant : 003242

Milligram-scale preparation and purification of oligosaccharides of defined length possessing the structure of chondroitin from defructosylated capsular polysaccharide K4.

Auteurs : Nicola Volpi [Italie]

Source :

RBID : pubmed:12702669

Descripteurs français

English descriptors

Abstract

Escherichia coli K4 bacterium synthesizes a nonsulfated capsule polysaccharide (K4) composed of a repeating disaccharide subunit of D-glucuronic acid (beta1-->3) and N-acetyl-D-galactosamine (beta1-->4) to which beta-fructofuranose units are linked to C-3 of D-glucuronic acid residues. The K4 polyanion is easily defructosylated under acid conditions with no fragmentation of the polymer to produce a polysaccharide having a repeated disaccharide unit of chondroitin consisting of D-glucuronic acid (beta1-->3) and N-acetyl-D-galactosamine (beta1-->4) (K4d). K4 and K4d were depolymerized by partial digestion with testicular hyaluronidase and separated into uniform-size oligosaccharides from 4-mers to 16-mers by preparative anion-exchange chromatography after removal of the hyaluronidase. The purity and size of each oligosaccharide was confirmed by using anion-exchange HPLC, HPSEC analysis, and FACE. Mg-scale K4d oligosaccharides were obtained from 50 mg K4d starting material. Under the conditions used to degrade the K4 polysaccharide by testicular hyaluronidase, fructose is slowly liberated forming the defructosylated K4. As a consequence, a mixture of uniform- size K4 and K4d oligosaccharide species, from approximately 4- to 20-mers, are generated and size-separated by anion-exchange chromatography. These pure, uniform-size, and large ranges of K4d oligosaccharides having the structure of a chondroitin, -->4)-GlcUA-beta(1-->3)GalNAc-beta(1-->, will be available for investigating important biological functions of this polymer.

DOI: 10.1093/glycob/cwg074
PubMed: 12702669

Links toward previous steps (curation, corpus...)


Links to Exploration step

pubmed:12702669

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Milligram-scale preparation and purification of oligosaccharides of defined length possessing the structure of chondroitin from defructosylated capsular polysaccharide K4.</title>
<author>
<name sortKey="Volpi, Nicola" sort="Volpi, Nicola" uniqKey="Volpi N" first="Nicola" last="Volpi">Nicola Volpi</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biologia Animale, University of Modena and Reggio Emilia, Via Campi 213/d, 41100 Modena, Italy. volpi@unimo.it</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Biologia Animale, University of Modena and Reggio Emilia, Via Campi 213/d, 41100 Modena</wicri:regionArea>
<wicri:noRegion>41100 Modena</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2003">2003</date>
<idno type="RBID">pubmed:12702669</idno>
<idno type="pmid">12702669</idno>
<idno type="doi">10.1093/glycob/cwg074</idno>
<idno type="wicri:Area/PubMed/Corpus">002457</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002457</idno>
<idno type="wicri:Area/PubMed/Curation">002457</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002457</idno>
<idno type="wicri:Area/PubMed/Checkpoint">002311</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002311</idno>
<idno type="wicri:Area/Ncbi/Merge">000190</idno>
<idno type="wicri:Area/Ncbi/Curation">000190</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000190</idno>
<idno type="wicri:doubleKey">0959-6658:2003:Volpi N:milligram:scale:preparation</idno>
<idno type="wicri:Area/Main/Merge">003241</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Milligram-scale preparation and purification of oligosaccharides of defined length possessing the structure of chondroitin from defructosylated capsular polysaccharide K4.</title>
<author>
<name sortKey="Volpi, Nicola" sort="Volpi, Nicola" uniqKey="Volpi N" first="Nicola" last="Volpi">Nicola Volpi</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biologia Animale, University of Modena and Reggio Emilia, Via Campi 213/d, 41100 Modena, Italy. volpi@unimo.it</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Biologia Animale, University of Modena and Reggio Emilia, Via Campi 213/d, 41100 Modena</wicri:regionArea>
<wicri:noRegion>41100 Modena</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Glycobiology</title>
<idno type="ISSN">0959-6658</idno>
<imprint>
<date when="2003" type="published">2003</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Bacterial Capsules</term>
<term>Chondroitin (chemistry)</term>
<term>Chromatography, High Pressure Liquid</term>
<term>Escherichia coli (chemistry)</term>
<term>Fructose (chemistry)</term>
<term>Oligosaccharides (chemistry)</term>
<term>Oligosaccharides (isolation & purification)</term>
<term>Polysaccharides, Bacterial (chemistry)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Capsules bactériennes</term>
<term>Chondroïtine ()</term>
<term>Chromatographie en phase liquide à haute performance</term>
<term>Escherichia coli ()</term>
<term>Fructose ()</term>
<term>Oligosaccharides ()</term>
<term>Oligosaccharides (isolement et purification)</term>
<term>Polyosides bactériens ()</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en">
<term>Chondroitin</term>
<term>Fructose</term>
<term>Oligosaccharides</term>
<term>Polysaccharides, Bacterial</term>
</keywords>
<keywords scheme="MESH" qualifier="chemistry" xml:lang="en">
<term>Escherichia coli</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en">
<term>Oligosaccharides</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr">
<term>Oligosaccharides</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Bacterial Capsules</term>
<term>Chromatography, High Pressure Liquid</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Capsules bactériennes</term>
<term>Chondroïtine</term>
<term>Chromatographie en phase liquide à haute performance</term>
<term>Escherichia coli</term>
<term>Fructose</term>
<term>Oligosaccharides</term>
<term>Polyosides bactériens</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Escherichia coli K4 bacterium synthesizes a nonsulfated capsule polysaccharide (K4) composed of a repeating disaccharide subunit of D-glucuronic acid (beta1-->3) and N-acetyl-D-galactosamine (beta1-->4) to which beta-fructofuranose units are linked to C-3 of D-glucuronic acid residues. The K4 polyanion is easily defructosylated under acid conditions with no fragmentation of the polymer to produce a polysaccharide having a repeated disaccharide unit of chondroitin consisting of D-glucuronic acid (beta1-->3) and N-acetyl-D-galactosamine (beta1-->4) (K4d). K4 and K4d were depolymerized by partial digestion with testicular hyaluronidase and separated into uniform-size oligosaccharides from 4-mers to 16-mers by preparative anion-exchange chromatography after removal of the hyaluronidase. The purity and size of each oligosaccharide was confirmed by using anion-exchange HPLC, HPSEC analysis, and FACE. Mg-scale K4d oligosaccharides were obtained from 50 mg K4d starting material. Under the conditions used to degrade the K4 polysaccharide by testicular hyaluronidase, fructose is slowly liberated forming the defructosylated K4. As a consequence, a mixture of uniform- size K4 and K4d oligosaccharide species, from approximately 4- to 20-mers, are generated and size-separated by anion-exchange chromatography. These pure, uniform-size, and large ranges of K4d oligosaccharides having the structure of a chondroitin, -->4)-GlcUA-beta(1-->3)GalNAc-beta(1-->, will be available for investigating important biological functions of this polymer.</div>
</front>
</TEI>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Main/Merge
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 003241 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Merge/biblio.hfd -nk 003241 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    MersV1
   |flux=    Main
   |étape=   Merge
   |type=    RBID
   |clé=     pubmed:12702669
   |texte=   Milligram-scale preparation and purification of oligosaccharides of defined length possessing the structure of chondroitin from defructosylated capsular polysaccharide K4.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Merge/RBID.i   -Sk "pubmed:12702669" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Merge/biblio.hfd   \
       | NlmPubMed2Wicri -a MersV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Mon Apr 20 23:26:43 2020. Site generation: Sat Mar 27 09:06:09 2021