Serveur d'exploration MERS - Exploration (Accueil)

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List of bibliographic references indexed by alignment

Number of relevant bibliographic references: 27.
[0-20] [0 - 20][0 - 27][20-26][20-40]
Ident.Authors (with country if any)Title
000338 (2019) Dylan Lebatteux [Canada] ; Amine M. Remita [Canada] ; Abdoulaye Baniré Diallo [Canada]Toward an Alignment-Free Method for Feature Extraction and Accurate Classification of Viral Sequences.
000411 (2019) Benjamin Linard [France] ; Krister Swenson [France] ; Fabio Pardi [France]Rapid alignment-free phylogenetic identification of metagenomic sequences.
000705 (2019) Wentian Li [États-Unis] ; Jerome Freudenberg [États-Unis] ; Jan Freudenberg [États-Unis]Alignment-free approaches for predicting novel Nuclear Mitochondrial Segments (NUMTs) in the human genome.
000862 (2018) Raúl Martin Amado Cattáneo [Argentine] ; Luis Diambra [Argentine] ; Andrés Norman Mccarthy [Argentine]Phylogenomics of tomato chloroplasts using assembly and alignment-free method.
000A37 (2018) Han Li [États-Unis] ; Fengzhu Sun [États-Unis, République populaire de Chine]Comparative studies of alignment, alignment-free and SVM based approaches for predicting the hosts of viruses based on viral sequences
000B23 (2017) Qian Zhang [États-Unis] ; Se-Ran Jun [États-Unis] ; Michael Leuze [États-Unis] ; David Ussery [États-Unis] ; Intawat Nookaew [États-Unis]Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer
000D85 (2017) Fanny-Dhelia Pajuste [Estonie] ; Lauris Kaplinski [Estonie] ; M Rt Möls [Estonie] ; Tarmo Puurand [Estonie] ; Maarja Lepamets [Estonie] ; Maido Remm [Estonie]FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
000E63 (2017) You Li [États-Unis, République populaire de Chine] ; Tayla B. Heavican [États-Unis] ; Neetha N. Vellichirammal [États-Unis] ; Javeed Iqbal [États-Unis] ; Chittibabu Guda [États-Unis]ChimeRScope: a novel alignment-free algorithm for fusion transcript prediction using paired-end RNA-Seq data
000E95 (2017) Guillaume Bernard [Australie] ; Cheong Xin Chan [Australie] ; Yao-Ban Chan [Australie] ; Xin-Yi Chua [Australie] ; Yingnan Cong [Australie] ; James M. Hogan [Australie] ; Stefan R. Maetschke [Australie] ; Mark A. Ragan [Australie]Alignment-free inference of hierarchical and reticulate phylogenomic relationships
001358 (2016) Guillaume Holley [Allemagne] ; Roland Wittler [Allemagne] ; Jens Stoye [Allemagne]Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage
001402 (2016) Yingnan Cong [Australie] ; Yao-Ban Chan [Australie] ; Mark A. Ragan [Australie]A novel alignment-free method for detection of lateral genetic transfer based on TF-IDF
001411 (2016) Armen Abnousi [États-Unis] ; Shira L. Broschat [États-Unis] ; Ananth Kalyanaraman [États-Unis]A Fast Alignment-Free Approach for De Novo Detection of Protein Conserved Regions
001726 (2015) Emanuel Weitschek [Italie] ; Fabio Cunial [Finlande] ; Giovanni Felici [Italie]LAF: Logic Alignment Free and its application to bacterial genomes classification
001861 (2015) Matteo Comin [Italie] ; Andrea Leoni [Italie] ; Michele Schimd [Italie]Clustering of reads with alignment-free measures and quality values
001A26 (2014) Pandurang Kolekar [Inde] ; Nilesh Hake [Inde] ; Mohan Kale [Inde] ; Urmila Kulkarni-Kale [Inde]WNV Typer: a server for genotyping of West Nile viruses using an alignment-free method based on a return time distribution.
001B32 (2014) Emanuel Weitschek [Italie] ; Daniele Santoni [Italie] ; Giulia Fiscon [Italie] ; Maria Cristina De Cola [Italie] ; Paola Bertolazzi [Italie] ; Giovanni Felici [Italie]Next generation sequencing reads comparison with an alignment-free distance
002063 (2013) Sebastian Maurer-Stroh [Singapour] ; Vithiagaran Gunalan ; Wing-Cheong Wong ; Frank EisenhaberA simple shortcut to unsupervised alignment-free phylogenetic genome groupings, even from unassembled sequencing reads.
002279 (2012) Pandurang Kolekar [Inde] ; Mohan Kale ; Urmila Kulkarni-KaleAlignment-free distance measure based on return time distribution for sequence analysis: applications to clustering, molecular phylogeny and subtyping.
002549 (2011) Wei-Hsin Chen [Taïwan] ; Yu-Wen Lu [Taïwan] ; Feipei Lai [Taïwan] ; Yin-Hsiu Chien [Taïwan] ; Wuh-Liang Hwu [Taïwan]Integrating Human Genome Database into Electronic Health Record with Sequence Alignment and Compression Mechanism
002601 (2010) Se-Ran Jun [États-Unis] ; Gregory E. Sims ; Guohong A. Wu ; Sung-Hou KimWhole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution.
002816 (2009) Gregory E. Sims [États-Unis] ; Se-Ran Jun ; Guohong A. Wu ; Sung-Hou KimAlignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions.

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