Serveur d'exploration MERS - Exploration (Accueil)

Index « Mesh.i » - entrée « Genome, Bacterial »
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Genome, Archaeal < Genome, Bacterial < Genome, Chloroplast  Facettes :

List of bibliographic references indexed by Genome, Bacterial

Number of relevant bibliographic references: 33.
[0-20] [0 - 20][0 - 33][20-32][20-40]
Ident.Authors (with country if any)Title
000351 (2019) Carmen L. Sheppard [Royaume-Uni] ; Natalie Groves [Royaume-Uni] ; Nicholas Andrews [Royaume-Uni] ; David J. Litt [Royaume-Uni] ; Norman K. Fry [Royaume-Uni] ; Jo Southern [Royaume-Uni] ; Elizabeth Miller [Royaume-Uni]The Genomics of Streptococcus pneumoniae Carriage Isolates from UK Children and Their Household Contacts, Pre-PCV7 to Post-PCV13
000359 (2019) Xiao Hu ; Iddo FriedbergSwiftOrtho: A fast, memory-efficient, multiple genome orthology classifier
000571 (2019) John A. Lees [États-Unis] ; Simon R. Harris [Royaume-Uni] ; Gerry Tonkin-Hill [Royaume-Uni] ; Rebecca A. Gladstone [Royaume-Uni] ; Stephanie W. Lo [Royaume-Uni] ; Jeffrey N. Weiser [États-Unis] ; Jukka Corander [Royaume-Uni] ; Stephen D. Bentley [Royaume-Uni] ; Nicholas J. Croucher [Royaume-Uni]Fast and flexible bacterial genomic epidemiology with PopPUNK.
000853 (2018) Pierre Mahé ; Maud TournoudPredicting bacterial resistance from whole-genome sequences using k-mers and stability selection
000901 (2018) Kévin Vervier [États-Unis] ; Pierre Mahé [France] ; Jean-Philippe Vert [France]MetaVW: Large-Scale Machine Learning for Metagenomics Sequence Classification.
000A01 (2018) Guillaume Méric ; Leonardos Mageiros ; Johan Pensar [Finlande] ; Maisem Laabei [Suède] ; Koji Yahara [Japon] ; Ben Pascoe ; Nattinee Kittiwan [Thaïlande] ; Phacharaporn Tadee [Thaïlande] ; Virginia Post [Suisse] ; Sarah Lamble ; Rory Bowden ; James E. Bray ; Mario Morgenstern [Suisse] ; Keith A. Jolley ; Martin C. J. Maiden ; Edward J. Feil ; Xavier Didelot ; Maria Miragaia [Portugal] ; Herminia De Lencastre [Portugal, États-Unis] ; T. Fintan Moriarty [Suisse] ; Holger Rohde [Allemagne] ; Ruth Massey ; Dietrich Mack [Allemagne] ; Jukka Corander [Finlande, Norvège] ; Samuel K. SheppardDisease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis
000A34 (2018) Valentina Galata [Allemagne] ; Christina Backes [Allemagne] ; Cédric Christian Laczny [Allemagne] ; Georg Hemmrich-Stanisak [Allemagne] ; Howard Li [États-Unis] ; Laura Smoot [États-Unis] ; Andreas Emanuel Posch [Allemagne] ; Susanne Schmolke [Allemagne] ; Markus Bischoff [Allemagne] ; Lutz Von Müller [Allemagne] ; Achim Plum [Allemagne] ; Andre Franke [Allemagne] ; Andreas Keller [Allemagne]Comparing genome versus proteome-based identification of clinical bacterial isolates.
000A88 (2018) Magali Jaillard [France] ; Leandro Lima [France] ; Maud Tournoud [France] ; Pierre Mahé [France] ; Alex Van Belkum [France] ; Vincent Lacroix [France] ; Laurent Jacob [France]A fast and agnostic method for bacterial genome-wide association studies: Bridging the gap between k-mers and genetic events
000A96 (2018) Erki Aun [Estonie] ; Age Brauer [Estonie] ; Veljo Kisand [Estonie] ; Tanel Tenson [Estonie] ; Maido Remm [Estonie]A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria
000C34 (2017) Maxime Déraspe [Canada] ; Frédéric Raymond [Canada] ; Sébastien Boisvert [Canada] ; Alexander Culley [Canada] ; Paul H. Roy [Canada] ; François Laviolette [Canada] ; Jacques Corbeil [Canada]Phenetic Comparison of Prokaryotic Genomes Using k-mers
000E30 (2017) Yaron Orenstein [États-Unis] ; David Pellow [Israël] ; Guillaume Marçais [États-Unis] ; Ron Shamir [Israël] ; Carl Kingsford [États-Unis]Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing
001026 (2016) John A. Lees [Royaume-Uni] ; Minna Vehkala [Finlande] ; Niko V Lim Ki [Finlande] ; Simon R. Harris [Royaume-Uni] ; Claire Chewapreecha [Royaume-Uni] ; Nicholas J. Croucher [Royaume-Uni] ; Pekka Marttinen [Finlande] ; Mark R. Davies [Australie] ; Andrew C. Steer [Australie] ; Steven Y. C. Tong [Australie] ; Antti Honkela [Finlande] ; Julian Parkhill [Royaume-Uni] ; Stephen D. Bentley [Royaume-Uni] ; Jukka Corander [Royaume-Uni, Finlande, Norvège]Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes
001361 (2016) Philip T L C. Clausen [Danemark] ; Ea Zankari [Danemark] ; Frank M. Aarestrup [Danemark] ; Ole Lund [Danemark]Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data.
001570 (2015) Karel B Inda [France] ; Maciej Sykulski [France] ; Gregory Kucherov [France]Spaced seeds improve k-mer-based metagenomic classification.
001583 (2015) Ramin Karimi ; Andras HajduSRIdent: A novel pipeline for real-time identification of species from high-throughput sequencing reads in Metagenomics and clinical diagnostic assays.
001595 (2015) Sooin Lee ; Yoseb Song ; Donghui Choe ; Suhyung Cho ; Seok Jong Yu ; Yongseong Cho ; Sun Chang Kim ; Byung-Kwan ChoReconstruction of Acetogenesis Pathway Using Short-Read Sequencing of Clostridium aceticum Genome.
001608 (2015) Florian Plaza Onate [France] ; Jean-Michel Batto [France] ; Catherine Juste [France] ; Jehane Fadlallah [France] ; Cyrielle Fougeroux [France] ; Doriane Gouas [France] ; Nicolas Pons [France] ; Sean Kennedy [France] ; Florence Levenez [France] ; Joel Dore [France] ; S Dusko Ehrlich [France] ; Guy Gorochov [France] ; Martin Larsen [France]Quality control of microbiota metagenomics by k-mer analysis
001616 (2015) Massimo La Rosa [Italie] ; Antonino Fiannaca [Italie] ; Riccardo Rizzo [Italie] ; Alfonso Urso [Italie]Probabilistic topic modeling for the analysis and classification of genomic sequences
001797 (2015) Ruichang Zhang [République populaire de Chine] ; Zhanzhan Cheng [République populaire de Chine] ; Jihong Guan [République populaire de Chine] ; Shuigeng Zhou [République populaire de Chine]Exploiting topic modeling to boost metagenomic reads binning
001833 (2015) Brian Cleary [États-Unis] ; Ilana Lauren Brito [États-Unis] ; Katherine Huang [États-Unis] ; Dirk Gevers [États-Unis] ; Terrance Shea [États-Unis] ; Sarah Young [États-Unis] ; Eric J. Alm [États-Unis]Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning.
002063 (2013) Sebastian Maurer-Stroh [Singapour] ; Vithiagaran Gunalan ; Wing-Cheong Wong ; Frank EisenhaberA simple shortcut to unsupervised alignment-free phylogenetic genome groupings, even from unassembled sequencing reads.

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