Bactéries (enzymologie) < Bactéries (génétique) < Bactéries (isolement et purification)

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List of bibliographic references indexed by Bactéries (génétique)

Number of relevant bibliographic references: 20.

Ident.	Authors (with country if any)	Title
000A96 (2018)	Erki Aun [Estonie] ; Age Brauer [Estonie] ; Veljo Kisand [Estonie] ; Tanel Tenson [Estonie] ; Maido Remm [Estonie]	A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria
000B08 (2017)	Anuj Gupta [États-Unis] ; I King Jordan [États-Unis] ; Lavanya Rishishwar [États-Unis]	stringMLST: a fast k-mer based tool for multilocus sequence typing.
000B10 (2017)	Jochen Kruppa ; Erhard Van Der Vries ; Wendy K. Jo ; Alexander Postel [Allemagne] ; Paul Becher [Allemagne] ; Albert Osterhaus ; Klaus Jung	kmerPyramid: an interactive visualization tool for nucleobase and k-mer frequencies.
000B89 (2017)	Francisco Vargas-Albores [Mexique] ; Luis Enrique Ortiz-Suárez [Mexique] ; Enrique Villalpando-Canchola [Mexique] ; Marcel Martínez-Porchas [Mexique]	Size-variable zone in V3 region of 16S rRNA.
000C34 (2017)	Maxime Déraspe [Canada] ; Frédéric Raymond [Canada] ; Sébastien Boisvert [Canada] ; Alexander Culley [Canada] ; Paul H. Roy [Canada] ; François Laviolette [Canada] ; Jacques Corbeil [Canada]	Phenetic Comparison of Prokaryotic Genomes Using k-mers
000E90 (2017)	Axel Wedemeyer [Allemagne] ; Lasse Kliemann [Allemagne] ; Anand Srivastav [Allemagne] ; Christian Schielke [Allemagne] ; Thorsten B. Reusch [Allemagne] ; Philip Rosenstiel [Allemagne]	An improved filtering algorithm for big read datasets and its application to single-cell assembly
001361 (2016)	Philip T L C. Clausen [Danemark] ; Ea Zankari [Danemark] ; Frank M. Aarestrup [Danemark] ; Ole Lund [Danemark]	Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data.
001565 (2015)	Karen Köhler [Allemagne] ; Elke Duchardt-Ferner [Allemagne] ; Marcus Lechner [Allemagne] ; Katrin Damm [Allemagne] ; Philipp G. Hoch [Allemagne] ; Margarita Salas [Espagne] ; Roland K. Hartmann [Allemagne]	Structural and mechanistic characterization of 6S RNA from the hyperthermophilic bacterium Aquifex aeolicus.
001608 (2015)	Florian Plaza Onate [France] ; Jean-Michel Batto [France] ; Catherine Juste [France] ; Jehane Fadlallah [France] ; Cyrielle Fougeroux [France] ; Doriane Gouas [France] ; Nicolas Pons [France] ; Sean Kennedy [France] ; Florence Levenez [France] ; Joel Dore [France] ; S Dusko Ehrlich [France] ; Guy Gorochov [France] ; Martin Larsen [France]	Quality control of microbiota metagenomics by k-mer analysis
001616 (2015)	Massimo La Rosa [Italie] ; Antonino Fiannaca [Italie] ; Riccardo Rizzo [Italie] ; Alfonso Urso [Italie]	Probabilistic topic modeling for the analysis and classification of genomic sequences
001833 (2015)	Brian Cleary [États-Unis] ; Ilana Lauren Brito [États-Unis] ; Katherine Huang [États-Unis] ; Dirk Gevers [États-Unis] ; Terrance Shea [États-Unis] ; Sarah Young [États-Unis] ; Eric J. Alm [États-Unis]	Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning.
001858 (2015)	Hilde Vinje ; Kristian Hovde Liland ; Trygve Alm Y ; Lars Snipen	Comparing K-mer based methods for improved classification of 16S sequences
001913 (2015)	David Koslicki [États-Unis] ; Saikat Chatterjee [Suède] ; Damon Shahrivar [Suède] ; Alan W. Walker [Royaume-Uni] ; Suzanna C. Francis [Royaume-Uni] ; Louise J. Fraser [Royaume-Uni] ; Mikko Vehkaper [Royaume-Uni] ; Yueheng Lan [République populaire de Chine] ; Jukka Corander [Finlande]	ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition
001B40 (2014)	Mark A. Ragan ; Guillaume Bernard ; Cheong Xin Chan	Molecular phylogenetics before sequences
001C04 (2014)	Derrick E. Wood [États-Unis] ; Steven L. Salzberg [États-Unis]	Kraken: ultrafast metagenomic sequence classification using exact alignments
001D31 (2014)	Mette V. Larsen [Danemark] ; Salvatore Cosentino ; Oksana Lukjancenko ; Dhany Saputra ; Simon Rasmussen ; Henrik Hasman ; Thomas Sicheritz-Pontén ; Frank M. Aarestrup ; David W. Ussery ; Ole Lund	Benchmarking of methods for genomic taxonomy.
002250 (2012)	Yu Peng [Hong Kong] ; Henry C M. Leung ; S M Yiu ; Francis Y L. Chin	IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth.
002992 (2008)	Virginia I. Rich [États-Unis] ; Konstantinos Konstantinidis ; Edward F. Delong	Design and testing of 'genome-proxy' microarrays to profile marine microbial communities.
003251 (2003)	Vincent J. Denef [Belgique, États-Unis] ; Joonhong Park [États-Unis] ; Jorge L. M. Rodrigues [États-Unis] ; Tamara V. Tsoi [États-Unis] ; Syed A. Hashsham [États-Unis] ; James M. Tiedje [États-Unis]	Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities
003344 (2002)	Jeong-Hyeon Choi [Corée du Sud] ; Hwan-Gue Cho	Analysis of common k-mers for whole genome sequences using SSB-tree.

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