Serveur d'exploration MERS - Exploration (Accueil)

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List of bibliographic references indexed by Algorithmes

Number of relevant bibliographic references: 238.
[0-20] [0 - 20][0 - 50][20-40]
Ident.Authors (with country if any)Title
000029 (2020) Xiao-Li Qiang ; Peng Xu ; Gang Fang ; Wen-Bin Liu ; Zheng KouUsing the spike protein feature to predict infection risk and monitor the evolutionary dynamic of coronavirus
000317 (2019) Xiaolong Zhang ; Yanyan Shao ; Jichao Tian ; Yuwei Liao ; Peiying Li ; Yu Zhang ; Jun Chen ; Zhiguang Li [République populaire de Chine]pTrimmer: An efficient tool to trim primers of multiplex deep sequencing data
000327 (2019) Luis Martínez [Espagne] ; Martin Milani [Slovénie] ; Iker Malaina [Espagne] ; Carmen Álvarez [Espagne] ; Martín-Blas Pérez [Espagne] ; Ildefonso M. De La Fuente [Espagne]Weighted lambda superstrings applied to vaccine design
000359 (2019) Xiao Hu ; Iddo FriedbergSwiftOrtho: A fast, memory-efficient, multiple genome orthology classifier
000482 (2019) Nathan Lapierre [États-Unis] ; Serghei Mangul [États-Unis] ; Mohammed Alser [Suisse] ; Igor Mandric [États-Unis] ; Nicholas C. Wu ; David Koslicki [États-Unis] ; Eleazar Eskin [États-Unis]MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples
000484 (2019) Jia Qian ; Matteo CominMetaCon: unsupervised clustering of metagenomic contigs with probabilistic k-mers statistics and coverage
000507 (2019) Sebastian Deorowicz [Pologne] ; Adam Gudys [Pologne] ; Maciej Dlugosz [Pologne] ; Marek Kokot [Pologne] ; Agnieszka Danek [Pologne]Kmer-db: instant evolutionary distance estimation.
000539 (2019) Chris Durden [États-Unis] ; Seth Sullivant [États-Unis]Identifiability of Phylogenetic Parameters from k-mer Data Under the Coalescent.
000587 (2019) Kui Hua [République populaire de Chine] ; Xuegong Zhang [République populaire de Chine]Estimating the total genome length of a metagenomic sample using k-mers
000597 (2019) Divya Khanna [Inde] ; Prashant Singh Rana [Inde]Ensemble Technique for Prediction of T-cell Mycobacterium tuberculosis Epitopes.
000680 (2019) Yoshihiro Shibuya [Italie, France] ; Matteo Comin [Italie]Better quality score compression through sequence-based quality smoothing
000698 (2019) Umberto Ferraro Petrillo [Italie] ; Mara Sorella [Italie] ; Giuseppe Cattaneo [Italie] ; Raffaele Giancarlo [Italie] ; Simona E. Rombo [Italie]Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statistics
000705 (2019) Wentian Li [États-Unis] ; Jerome Freudenberg [États-Unis] ; Jan Freudenberg [États-Unis]Alignment-free approaches for predicting novel Nuclear Mitochondrial Segments (NUMTs) in the human genome.
000723 (2019) Sungjoon Park [Corée du Sud] ; Minsu Kim [Corée du Sud] ; Seokjun Seo [Corée du Sud] ; Seungwan Hong [Corée du Sud] ; Kyoohyung Han [Corée du Sud] ; Keewoo Lee [Corée du Sud] ; Jung Hee Cheon [Corée du Sud] ; Sun Kim [Corée du Sud]A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side
000728 (2019) Michael L. Paull ; Tim Johnston ; Kelly N. Ibsen ; Joel D. Bozekowski ; Patrick S. DaughertyA general approach for predicting protein epitopes targeted by antibody repertoires using whole proteomes
000731 (2019) Weiling Li [États-Unis] ; Lin Lin [États-Unis] ; Raunaq Malhotra [États-Unis] ; Lei Yang [États-Unis] ; Raj Acharya [États-Unis] ; Mary Poss [États-Unis]A computational framework to assess genome-wide distribution of polymorphic human endogenous retrovirus-K In human populations
000739 (2019) V. Swaminathan [Inde] ; Gangothri Rajaram [Inde] ; V. Abhishek [Inde] ; Boosi Shashank Reddy [Inde] ; K. Kannan [Inde]A Novel Hypergraph-Based Genetic Algorithm (HGGA) Built on Unimodular and Anti-homomorphism Properties for DNA Sequencing by Hybridization.
000750 (2019) Stephen Woloszynek [États-Unis] ; Zhengqiao Zhao [États-Unis] ; Jian Chen [États-Unis] ; Gail L. Rosen [États-Unis]16S rRNA sequence embeddings: Meaningful numeric feature representations of nucleotide sequences that are convenient for downstream analyses
000756 (2018) Md Rafsan Jani [Bangladesh] ; Md Toha Khan Mozlish [Bangladesh] ; Sajid Ahmed [Bangladesh] ; Niger Sultana Tahniat [Bangladesh] ; Dewan Md Farid [Bangladesh] ; Swakkhar Shatabda [Bangladesh]iRecSpot-EF: Effective sequence based features for recombination hotspot prediction.
000804 (2018) Prashant Pandey [États-Unis] ; Michael A. Bender [États-Unis] ; Rob Johnson [États-Unis] ; Rob Patro [États-Unis] ; Bonnie BergerSqueakr: an exact and approximate k-mer counting system.
000819 (2018) Igor Saggese [Italie] ; Elisa Bona [Italie] ; Max Conway ; Francesco Favero [Italie] ; Marco Ladetto [Italie] ; Pietro Li ; Giovanni Manzini [Italie] ; Flavio Mignone [Italie]STAble: a novel approach to de novo assembly of RNA-seq data and its application in a metabolic model network based metatranscriptomic workflow

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