Mesh.i
Exploration
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Exploration
Accueil
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Serveur d'exploration MERS - Exploration (Accueil)

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List of bibliographic references indexed by Software

Number of relevant bibliographic references: 134.
[20-40] [0 - 20][0 - 50][40-60]
Ident.Authors (with country if any)Title
000A69 (2018) Chen Sun [États-Unis] ; Robert S. Harris [États-Unis] ; Rayan Chikhi [France] ; Paul Medvedev [États-Unis]AllSome Sequence Bloom Trees.
000A88 (2018) Magali Jaillard [France] ; Leandro Lima [France] ; Maud Tournoud [France] ; Pierre Mahé [France] ; Alex Van Belkum [France] ; Vincent Lacroix [France] ; Laurent Jacob [France]A fast and agnostic method for bacterial genome-wide association studies: Bridging the gap between k-mers and genetic events
000A92 (2018) Swati C. Manekar [Inde] ; Shailesh R. Sathe [Inde]A benchmark study of k-mer counting methods for high-throughput sequencing
000A96 (2018) Erki Aun [Estonie] ; Age Brauer [Estonie] ; Veljo Kisand [Estonie] ; Tanel Tenson [Estonie] ; Maido Remm [Estonie]A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria
000B08 (2017) Anuj Gupta [États-Unis] ; I King Jordan [États-Unis] ; Lavanya Rishishwar [États-Unis]stringMLST: a fast k-mer based tool for multilocus sequence typing.
000B09 (2017) Hamid Mohamadi [Canada] ; Hamza Khan [Canada] ; Inanc Birol [Canada]ntCard: a streaming algorithm for cardinality estimation in genomics data
000B10 (2017) Jochen Kruppa ; Erhard Van Der Vries ; Wendy K. Jo ; Alexander Postel [Allemagne] ; Paul Becher [Allemagne] ; Albert Osterhaus ; Klaus JungkmerPyramid: an interactive visualization tool for nucleobase and k-mer frequencies.
000B14 (2017) Abedalrhman Alkhateeb ; Luis RuedaZseq: An Approach for Preprocessing Next-Generation Sequencing Data
000B29 (2017) Dirk D. Dolle [Royaume-Uni] ; Zhicheng Liu [Royaume-Uni] ; Matthew Cotten [Royaume-Uni] ; Jared T. Simpson [Canada] ; Zamin Iqbal [Royaume-Uni] ; Richard Durbin [Royaume-Uni] ; Shane A. Mccarthy [Royaume-Uni] ; Thomas M. Keane [Royaume-Uni]Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes.
000B53 (2017) Meznah Almutairy ; Eric TorngThe effects of sampling on the efficiency and accuracy of k−mer indexes: Theoretical and empirical comparisons using the human genome
000B66 (2017) Petr Novák [République tchèque] ; Laura Ávila Robledillo [République tchèque] ; Andrea Koblížková [République tchèque] ; Iva Vrbová [République tchèque] ; Pavel Neumann [République tchèque] ; Ji Macas [République tchèque]TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads
000C11 (2017) Jad Abbass [Royaume-Uni] ; Jean-Christophe NebelReduced Fragment Diversity for Alpha and Alpha-Beta Protein Structure Prediction using Rosetta.
000C32 (2017) Roman V. Briskine ; Kentaro K. Shimizu [Japon]Positional bias in variant calls against draft reference assemblies
000C34 (2017) Maxime Déraspe [Canada] ; Frédéric Raymond [Canada] ; Sébastien Boisvert [Canada] ; Alexander Culley [Canada] ; Paul H. Roy [Canada] ; François Laviolette [Canada] ; Jacques Corbeil [Canada]Phenetic Comparison of Prokaryotic Genomes Using k-mers
000C51 (2017) Yaron Orenstein [États-Unis] ; Robert Puccinelli [États-Unis] ; Ryan Kim [États-Unis] ; Polly Fordyce [États-Unis] ; Bonnie Berger [États-Unis]Optimized Sequence Library Design for Efficient In Vitro Interaction Mapping.
000C59 (2017) Kosai Al-Nakeeb ; Thomas Nordahl Petersen ; Thomas Sicheritz-PonténNorgal: extraction and de novo assembly of mitochondrial DNA from whole-genome sequencing data
000C97 (2017) André Müller ; Christian Hundt ; Andreas Hildebrandt ; Thomas Hankeln [Allemagne] ; Bertil SchmidtMetaCache: context-aware classification of metagenomic reads using minhashing.
000D00 (2017) Dinghua Li [Hong Kong] ; Yukun Huang [Hong Kong] ; Chi-Ming Leung [Hong Kong] ; Ruibang Luo [Hong Kong] ; Hing-Fung Ting [Hong Kong] ; Tak-Wah Lam [Hong Kong]MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs
000D25 (2017) Marek Kokot [Pologne] ; Maciej Dlugosz [Pologne] ; Sebastian Deorowicz [Pologne]KMC 3: counting and manipulating k-mer statistics.
000D39 (2017) Guillaume Marçais [États-Unis] ; David Pellow [Israël] ; Daniel Bork [États-Unis] ; Yaron Orenstein [États-Unis] ; Ron Shamir [Israël] ; Carl Kingsford [États-Unis]Improving the performance of minimizers and winnowing schemes
000D40 (2017) David Pellow ; Darya Filippova ; Carl KingsfordImproving Bloom Filter Performance on Sequence Data Using k-mer Bloom Filters

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