Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.
Identifieur interne : 003446 ( Main/Exploration ); précédent : 003445; suivant : 003447Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.
Auteurs : J W Flora [États-Unis] ; D C MuddimanSource :
- Journal of the American Society for Mass Spectrometry [ 1044-0305 ] ; 2001.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- chemical , chemistry : Peptide Nucleic Acids.
- Calibration, Chemical Phenomena, Chemistry, Physical, Mass Spectrometry, Sequence Analysis, DNA.
Abstract
Complete peptide nucleic acids (PNAs) sequence information is obtained from the unimolecular decomposition of singly-charged PNA oligomers in the negative-ion mode using electrospray ionization coupled with Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) and sustained off-resonance irradiation collision induced dissociation. The 4-mers, n-CATT-c, n-AGCT-c, n-AACT-c, and n-acetylated-AACT-c and two 6-mers, n-AAAAAA-c and n-CCCCCC-c, were investigated to explore the unimolecular decomposition of mixed-nucleobase and homopolymer PNAs representing purine and pyrimidine oligomers, respectively. PNA decomposition is explored using a product-ion appearance curve and double resonance experiments. A decomposition mechanism for sequence ion formation (PNA amide bond cleavage) is proposed.
DOI: 10.1016/S1044-0305(01)00259-8
PubMed: 11444602
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 002555
- to stream PubMed, to step Curation: 002555
- to stream PubMed, to step Checkpoint: 002420
- to stream Ncbi, to step Merge: 000090
- to stream Ncbi, to step Curation: 000090
- to stream Ncbi, to step Checkpoint: 000090
- to stream Main, to step Merge: 003483
- to stream Main, to step Curation: 003446
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.</title>
<author><name sortKey="Flora, J W" sort="Flora, J W" uniqKey="Flora J" first="J W" last="Flora">J W Flora</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Chemistry, Virginia Commonwealth University, Richmond 84206, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Chemistry, Virginia Commonwealth University, Richmond 84206</wicri:regionArea>
<wicri:noRegion>Richmond 84206</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Muddiman, D C" sort="Muddiman, D C" uniqKey="Muddiman D" first="D C" last="Muddiman">D C Muddiman</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2001">2001</date>
<idno type="RBID">pubmed:11444602</idno>
<idno type="pmid">11444602</idno>
<idno type="doi">10.1016/S1044-0305(01)00259-8</idno>
<idno type="wicri:Area/PubMed/Corpus">002555</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002555</idno>
<idno type="wicri:Area/PubMed/Curation">002555</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002555</idno>
<idno type="wicri:Area/PubMed/Checkpoint">002420</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002420</idno>
<idno type="wicri:Area/Ncbi/Merge">000090</idno>
<idno type="wicri:Area/Ncbi/Curation">000090</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000090</idno>
<idno type="wicri:doubleKey">1044-0305:2001:Flora J:complete:sequencing:of</idno>
<idno type="wicri:Area/Main/Merge">003483</idno>
<idno type="wicri:Area/Main/Curation">003446</idno>
<idno type="wicri:Area/Main/Exploration">003446</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.</title>
<author><name sortKey="Flora, J W" sort="Flora, J W" uniqKey="Flora J" first="J W" last="Flora">J W Flora</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Chemistry, Virginia Commonwealth University, Richmond 84206, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Chemistry, Virginia Commonwealth University, Richmond 84206</wicri:regionArea>
<wicri:noRegion>Richmond 84206</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Muddiman, D C" sort="Muddiman, D C" uniqKey="Muddiman D" first="D C" last="Muddiman">D C Muddiman</name>
</author>
</analytic>
<series><title level="j">Journal of the American Society for Mass Spectrometry</title>
<idno type="ISSN">1044-0305</idno>
<imprint><date when="2001" type="published">2001</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Calibration</term>
<term>Chemical Phenomena</term>
<term>Chemistry, Physical</term>
<term>Mass Spectrometry</term>
<term>Peptide Nucleic Acids (chemistry)</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Acides nucléiques peptidiques ()</term>
<term>Analyse de séquence d'ADN</term>
<term>Calibrage</term>
<term>Chimie physique</term>
<term>Phénomènes chimiques</term>
<term>Spectrométrie de masse</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Peptide Nucleic Acids</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Calibration</term>
<term>Chemical Phenomena</term>
<term>Chemistry, Physical</term>
<term>Mass Spectrometry</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Acides nucléiques peptidiques</term>
<term>Analyse de séquence d'ADN</term>
<term>Calibrage</term>
<term>Chimie physique</term>
<term>Phénomènes chimiques</term>
<term>Spectrométrie de masse</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Complete peptide nucleic acids (PNAs) sequence information is obtained from the unimolecular decomposition of singly-charged PNA oligomers in the negative-ion mode using electrospray ionization coupled with Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) and sustained off-resonance irradiation collision induced dissociation. The 4-mers, n-CATT-c, n-AGCT-c, n-AACT-c, and n-acetylated-AACT-c and two 6-mers, n-AAAAAA-c and n-CCCCCC-c, were investigated to explore the unimolecular decomposition of mixed-nucleobase and homopolymer PNAs representing purine and pyrimidine oligomers, respectively. PNA decomposition is explored using a product-ion appearance curve and double resonance experiments. A decomposition mechanism for sequence ion formation (PNA amide bond cleavage) is proposed.</div>
</front>
</TEI>
<affiliations><list><country><li>États-Unis</li>
</country>
</list>
<tree><noCountry><name sortKey="Muddiman, D C" sort="Muddiman, D C" uniqKey="Muddiman D" first="D C" last="Muddiman">D C Muddiman</name>
</noCountry>
<country name="États-Unis"><noRegion><name sortKey="Flora, J W" sort="Flora, J W" uniqKey="Flora J" first="J W" last="Flora">J W Flora</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 003446 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 003446 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= MersV1 |flux= Main |étape= Exploration |type= RBID |clé= pubmed:11444602 |texte= Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:11444602" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a MersV1
This area was generated with Dilib version V0.6.33. |