Serveur d'exploration MERS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.

Identifieur interne : 003446 ( Main/Exploration ); précédent : 003445; suivant : 003447

Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.

Auteurs : J W Flora [États-Unis] ; D C Muddiman

Source :

RBID : pubmed:11444602

Descripteurs français

English descriptors

Abstract

Complete peptide nucleic acids (PNAs) sequence information is obtained from the unimolecular decomposition of singly-charged PNA oligomers in the negative-ion mode using electrospray ionization coupled with Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) and sustained off-resonance irradiation collision induced dissociation. The 4-mers, n-CATT-c, n-AGCT-c, n-AACT-c, and n-acetylated-AACT-c and two 6-mers, n-AAAAAA-c and n-CCCCCC-c, were investigated to explore the unimolecular decomposition of mixed-nucleobase and homopolymer PNAs representing purine and pyrimidine oligomers, respectively. PNA decomposition is explored using a product-ion appearance curve and double resonance experiments. A decomposition mechanism for sequence ion formation (PNA amide bond cleavage) is proposed.

DOI: 10.1016/S1044-0305(01)00259-8
PubMed: 11444602


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.</title>
<author>
<name sortKey="Flora, J W" sort="Flora, J W" uniqKey="Flora J" first="J W" last="Flora">J W Flora</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Chemistry, Virginia Commonwealth University, Richmond 84206, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Chemistry, Virginia Commonwealth University, Richmond 84206</wicri:regionArea>
<wicri:noRegion>Richmond 84206</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Muddiman, D C" sort="Muddiman, D C" uniqKey="Muddiman D" first="D C" last="Muddiman">D C Muddiman</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2001">2001</date>
<idno type="RBID">pubmed:11444602</idno>
<idno type="pmid">11444602</idno>
<idno type="doi">10.1016/S1044-0305(01)00259-8</idno>
<idno type="wicri:Area/PubMed/Corpus">002555</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002555</idno>
<idno type="wicri:Area/PubMed/Curation">002555</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002555</idno>
<idno type="wicri:Area/PubMed/Checkpoint">002420</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002420</idno>
<idno type="wicri:Area/Ncbi/Merge">000090</idno>
<idno type="wicri:Area/Ncbi/Curation">000090</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000090</idno>
<idno type="wicri:doubleKey">1044-0305:2001:Flora J:complete:sequencing:of</idno>
<idno type="wicri:Area/Main/Merge">003483</idno>
<idno type="wicri:Area/Main/Curation">003446</idno>
<idno type="wicri:Area/Main/Exploration">003446</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.</title>
<author>
<name sortKey="Flora, J W" sort="Flora, J W" uniqKey="Flora J" first="J W" last="Flora">J W Flora</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Chemistry, Virginia Commonwealth University, Richmond 84206, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Chemistry, Virginia Commonwealth University, Richmond 84206</wicri:regionArea>
<wicri:noRegion>Richmond 84206</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Muddiman, D C" sort="Muddiman, D C" uniqKey="Muddiman D" first="D C" last="Muddiman">D C Muddiman</name>
</author>
</analytic>
<series>
<title level="j">Journal of the American Society for Mass Spectrometry</title>
<idno type="ISSN">1044-0305</idno>
<imprint>
<date when="2001" type="published">2001</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Calibration</term>
<term>Chemical Phenomena</term>
<term>Chemistry, Physical</term>
<term>Mass Spectrometry</term>
<term>Peptide Nucleic Acids (chemistry)</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Acides nucléiques peptidiques ()</term>
<term>Analyse de séquence d'ADN</term>
<term>Calibrage</term>
<term>Chimie physique</term>
<term>Phénomènes chimiques</term>
<term>Spectrométrie de masse</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en">
<term>Peptide Nucleic Acids</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Calibration</term>
<term>Chemical Phenomena</term>
<term>Chemistry, Physical</term>
<term>Mass Spectrometry</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Acides nucléiques peptidiques</term>
<term>Analyse de séquence d'ADN</term>
<term>Calibrage</term>
<term>Chimie physique</term>
<term>Phénomènes chimiques</term>
<term>Spectrométrie de masse</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Complete peptide nucleic acids (PNAs) sequence information is obtained from the unimolecular decomposition of singly-charged PNA oligomers in the negative-ion mode using electrospray ionization coupled with Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) and sustained off-resonance irradiation collision induced dissociation. The 4-mers, n-CATT-c, n-AGCT-c, n-AACT-c, and n-acetylated-AACT-c and two 6-mers, n-AAAAAA-c and n-CCCCCC-c, were investigated to explore the unimolecular decomposition of mixed-nucleobase and homopolymer PNAs representing purine and pyrimidine oligomers, respectively. PNA decomposition is explored using a product-ion appearance curve and double resonance experiments. A decomposition mechanism for sequence ion formation (PNA amide bond cleavage) is proposed.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>États-Unis</li>
</country>
</list>
<tree>
<noCountry>
<name sortKey="Muddiman, D C" sort="Muddiman, D C" uniqKey="Muddiman D" first="D C" last="Muddiman">D C Muddiman</name>
</noCountry>
<country name="États-Unis">
<noRegion>
<name sortKey="Flora, J W" sort="Flora, J W" uniqKey="Flora J" first="J W" last="Flora">J W Flora</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 003446 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 003446 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    MersV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:11444602
   |texte=   Complete sequencing of mono-deprotonated peptide nucleic acids by sustained off-resonance irradiation collision-induced dissociation.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:11444602" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a MersV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Mon Apr 20 23:26:43 2020. Site generation: Sat Mar 27 09:06:09 2021