Ray Meta: scalable de novo metagenome assembly and profiling
Identifieur interne : 002217 ( Main/Exploration ); précédent : 002216; suivant : 002218Ray Meta: scalable de novo metagenome assembly and profiling
Auteurs : Sébastien Boisvert [Canada] ; Frédéric Raymond [Canada] ; Élénie Godzaridis [Canada] ; François Laviolette [Canada] ; Jacques Corbeil [Canada]Source :
- Genome Biology [ 1465-6906 ] ; 2012.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- classification : Bacteria.
- methods : Metagenomics.
- Gene Ontology, Genome, Bacterial, High-Throughput Nucleotide Sequencing, Metagenome, Software.
Abstract
Voluminous parallel sequencing datasets, especially metagenomic experiments, require distributed computing for
Url:
DOI: 10.1186/gb-2012-13-12-r122
PubMed: 23259615
PubMed Central: 4056372
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000965
- to stream Pmc, to step Curation: 000965
- to stream Pmc, to step Checkpoint: 001286
- to stream PubMed, to step Corpus: 001D31
- to stream PubMed, to step Curation: 001D31
- to stream PubMed, to step Checkpoint: 001C43
- to stream Ncbi, to step Merge: 000A13
- to stream Ncbi, to step Curation: 000A13
- to stream Ncbi, to step Checkpoint: 000A13
- to stream Main, to step Merge: 002242
- to stream Main, to step Curation: 002217
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Ray Meta: scalable <italic>de novo </italic>metagenome assembly and profiling</title><author><name sortKey="Boisvert, Sebastien" sort="Boisvert, Sebastien" uniqKey="Boisvert S" first="Sébastien" last="Boisvert">Sébastien Boisvert</name><affiliation wicri:level="1"><nlm:aff id="I1">Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2</wicri:regionArea><wicri:noRegion>G1V 4G2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Raymond, Frederic" sort="Raymond, Frederic" uniqKey="Raymond F" first="Frédéric" last="Raymond">Frédéric Raymond</name><affiliation wicri:level="1"><nlm:aff id="I1">Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2</wicri:regionArea><wicri:noRegion>G1V 4G2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Godzaridis, Elenie" sort="Godzaridis, Elenie" uniqKey="Godzaridis E" first="Élénie" last="Godzaridis">Élénie Godzaridis</name><affiliation wicri:level="1"><nlm:aff id="I2">Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Laviolette, Francois" sort="Laviolette, Francois" uniqKey="Laviolette F" first="François" last="Laviolette">François Laviolette</name><affiliation wicri:level="1"><nlm:aff id="I3">Department of Computer Science and Software Engineering, Faculty of Science and Engineering, Laval University, 1065, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Computer Science and Software Engineering, Faculty of Science and Engineering, Laval University, 1065, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Corbeil, Jacques" sort="Corbeil, Jacques" uniqKey="Corbeil J" first="Jacques" last="Corbeil">Jacques Corbeil</name><affiliation wicri:level="1"><nlm:aff id="I1">Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2</wicri:regionArea><wicri:noRegion>G1V 4G2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I4">Department of Molecular Medicine, Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Molecular Medicine, Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23259615</idno><idno type="pmc">4056372</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056372</idno><idno type="RBID">PMC:4056372</idno><idno type="doi">10.1186/gb-2012-13-12-r122</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000965</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000965</idno><idno type="wicri:Area/Pmc/Curation">000965</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000965</idno><idno type="wicri:Area/Pmc/Checkpoint">001286</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">001286</idno><idno type="wicri:source">PubMed</idno><idno type="RBID">pubmed:23259615</idno><idno type="wicri:Area/PubMed/Corpus">001D31</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001D31</idno><idno type="wicri:Area/PubMed/Curation">001D31</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001D31</idno><idno type="wicri:Area/PubMed/Checkpoint">001C43</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001C43</idno><idno type="wicri:Area/Ncbi/Merge">000A13</idno><idno type="wicri:Area/Ncbi/Curation">000A13</idno><idno type="wicri:Area/Ncbi/Checkpoint">000A13</idno><idno type="wicri:doubleKey">1465-6906:2012:Boisvert S:ray:meta:scalable</idno><idno type="wicri:Area/Main/Merge">002242</idno><idno type="wicri:Area/Main/Curation">002217</idno><idno type="wicri:Area/Main/Exploration">002217</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Ray Meta: scalable <italic>de novo </italic>metagenome assembly and profiling</title><author><name sortKey="Boisvert, Sebastien" sort="Boisvert, Sebastien" uniqKey="Boisvert S" first="Sébastien" last="Boisvert">Sébastien Boisvert</name><affiliation wicri:level="1"><nlm:aff id="I1">Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2</wicri:regionArea><wicri:noRegion>G1V 4G2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Raymond, Frederic" sort="Raymond, Frederic" uniqKey="Raymond F" first="Frédéric" last="Raymond">Frédéric Raymond</name><affiliation wicri:level="1"><nlm:aff id="I1">Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2</wicri:regionArea><wicri:noRegion>G1V 4G2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Godzaridis, Elenie" sort="Godzaridis, Elenie" uniqKey="Godzaridis E" first="Élénie" last="Godzaridis">Élénie Godzaridis</name><affiliation wicri:level="1"><nlm:aff id="I2">Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Laviolette, Francois" sort="Laviolette, Francois" uniqKey="Laviolette F" first="François" last="Laviolette">François Laviolette</name><affiliation wicri:level="1"><nlm:aff id="I3">Department of Computer Science and Software Engineering, Faculty of Science and Engineering, Laval University, 1065, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Computer Science and Software Engineering, Faculty of Science and Engineering, Laval University, 1065, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author><author><name sortKey="Corbeil, Jacques" sort="Corbeil, Jacques" uniqKey="Corbeil J" first="Jacques" last="Corbeil">Jacques Corbeil</name><affiliation wicri:level="1"><nlm:aff id="I1">Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Diseases Research Center, CHUQ Research Center, 2705, boul. Laurier, Québec (Québec), G1V 4G2</wicri:regionArea><wicri:noRegion>G1V 4G2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I4">Department of Molecular Medicine, Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Molecular Medicine, Faculty of Medicine, Laval University, 1050, av. de la Médecine, Québec (Québec), G1V 0A6</wicri:regionArea><wicri:noRegion>G1V 0A6</wicri:noRegion></affiliation></author></analytic><series><title level="j">Genome Biology</title><idno type="ISSN">1465-6906</idno><idno type="eISSN">1465-6914</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteria (classification)</term><term>Gene Ontology</term><term>Genome, Bacterial</term><term>High-Throughput Nucleotide Sequencing</term><term>Metagenome</term><term>Metagenomics (methods)</term><term>Software</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Bactéries ()</term><term>Gene Ontology</term><term>Génome bactérien</term><term>Logiciel</term><term>Métagénome</term><term>Métagénomique ()</term><term>Séquençage nucléotidique à haut débit</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Bacteria</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Metagenomics</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Ontology</term><term>Genome, Bacterial</term><term>High-Throughput Nucleotide Sequencing</term><term>Metagenome</term><term>Software</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Bactéries</term><term>Gene Ontology</term><term>Génome bactérien</term><term>Logiciel</term><term>Métagénome</term><term>Métagénomique</term><term>Séquençage nucléotidique à haut débit</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Voluminous parallel sequencing datasets, especially metagenomic experiments, require distributed computing for <italic>de novo </italic>assembly and taxonomic profiling. Ray Meta is a massively distributed metagenome assembler that is coupled with Ray Communities, which profiles microbiomes based on uniquely-colored k-mers. It can accurately assemble and profile a three billion read metagenomic experiment representing 1,000 bacterial genomes of uneven proportions in 15 hours with 1,024 processor cores, using only 1.5 GB per core. The software will facilitate the processing of large and complex datasets, and will help in generating biological insights for specific environments. Ray Meta is open source and available at <ext-link ext-link-type="uri" xlink:href="http://denovoassembler.sf.net">http://denovoassembler.sf.net</ext-link>.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Wold, B" uniqKey="Wold B">B Wold</name></author><author><name sortKey="Myers, Rm" uniqKey="Myers R">RM Myers</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Brenner, S" uniqKey="Brenner S">S Brenner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mcpherson, Jd" uniqKey="Mcpherson J">JD McPherson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mardis, E" uniqKey="Mardis E">E Mardis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Compeau, Pec" uniqKey="Compeau P">PEC Compeau</name></author><author><name sortKey="Pevzner, Pa" uniqKey="Pevzner P">PA Pevzner</name></author><author><name sortKey="Tesler, G" uniqKey="Tesler G">G Tesler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Flicek, P" uniqKey="Flicek P">P Flicek</name></author><author><name sortKey="Birney, E" uniqKey="Birney E">E Birney</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Iqbal, Z" uniqKey="Iqbal Z">Z Iqbal</name></author><author><name sortKey="Caccamo, M" uniqKey="Caccamo M">M Caccamo</name></author><author><name sortKey="Turner, I" uniqKey="Turner I">I Turner</name></author><author><name sortKey="Flicek, P" uniqKey="Flicek P">P Flicek</name></author><author><name sortKey="Mcvean, G" uniqKey="Mcvean G">G McVean</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Miller, Jr" uniqKey="Miller J">JR Miller</name></author><author><name sortKey="Koren, S" uniqKey="Koren S">S Koren</name></author><author><name sortKey="Sutton, G" uniqKey="Sutton G">G Sutton</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Treangen, Tj" uniqKey="Treangen T">TJ Treangen</name></author><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lorenz, P" uniqKey="Lorenz P">P Lorenz</name></author><author><name sortKey="Eck, J" uniqKey="Eck J">J Eck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Scholz, Mb" uniqKey="Scholz M">MB Scholz</name></author><author><name sortKey="Lo, Cc" uniqKey="Lo C">CC Lo</name></author><author><name sortKey="Chain, Psg" uniqKey="Chain P">PSG Chain</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schoenfeld, T" uniqKey="Schoenfeld T">T Schoenfeld</name></author><author><name sortKey="Patterson, M" uniqKey="Patterson M">M Patterson</name></author><author><name sortKey="Richardson, Pm" uniqKey="Richardson P">PM Richardson</name></author><author><name sortKey="Wommack, Ke" uniqKey="Wommack K">KE Wommack</name></author><author><name sortKey="Young, M" uniqKey="Young M">M Young</name></author><author><name sortKey="Mead, D" uniqKey="Mead D">D Mead</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Varin, T" uniqKey="Varin T">T Varin</name></author><author><name sortKey="Lovejoy, C" uniqKey="Lovejoy C">C Lovejoy</name></author><author><name sortKey="Jungblut, Ad" uniqKey="Jungblut A">AD Jungblut</name></author><author><name sortKey="Vincent, Wf" uniqKey="Vincent W">WF Vincent</name></author><author><name sortKey="Corbeil, J" uniqKey="Corbeil J">J Corbeil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Varin, T" uniqKey="Varin T">T Varin</name></author><author><name sortKey="Lovejoy, C" uniqKey="Lovejoy C">C Lovejoy</name></author><author><name sortKey="Jungblut, Ad" uniqKey="Jungblut A">AD Jungblut</name></author><author><name sortKey="Vincent, Wf" uniqKey="Vincent W">WF Vincent</name></author><author><name sortKey="Corbeil, J" uniqKey="Corbeil J">J Corbeil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Narasingarao, P" uniqKey="Narasingarao P">P Narasingarao</name></author><author><name sortKey="Podell, S" uniqKey="Podell S">S Podell</name></author><author><name sortKey="Ugalde, Ja" uniqKey="Ugalde J">JA Ugalde</name></author><author><name sortKey="Brochier Armanet, C" uniqKey="Brochier Armanet C">C Brochier-Armanet</name></author><author><name sortKey="Emerson, Jb" uniqKey="Emerson J">JB Emerson</name></author><author><name sortKey="Brocks, Jj" uniqKey="Brocks J">JJ Brocks</name></author><author><name sortKey="Heidelberg, Kb" uniqKey="Heidelberg K">KB Heidelberg</name></author><author><name sortKey="Banfield, Jf" uniqKey="Banfield J">JF Banfield</name></author><author><name sortKey="Allen, Ee" uniqKey="Allen E">EE Allen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tringe, Sg" uniqKey="Tringe S">SG Tringe</name></author><author><name sortKey="Von Mering, C" uniqKey="Von Mering C">C von Mering</name></author><author><name sortKey="Kobayashi, A" uniqKey="Kobayashi A">A Kobayashi</name></author><author><name sortKey="Salamov, Aa" uniqKey="Salamov A">AA Salamov</name></author><author><name sortKey="Chen, K" uniqKey="Chen K">K Chen</name></author><author><name sortKey="Chang, Hw" uniqKey="Chang H">HW Chang</name></author><author><name sortKey="Podar, M" uniqKey="Podar M">M Podar</name></author><author><name sortKey="Short, Jm" uniqKey="Short J">JM Short</name></author><author><name sortKey="Mathur, Ej" uniqKey="Mathur E">EJ Mathur</name></author><author><name sortKey="Detter, Jc" uniqKey="Detter J">JC Detter</name></author><author><name sortKey="Bork, P" uniqKey="Bork P">P Bork</name></author><author><name sortKey="Hugenholtz, P" uniqKey="Hugenholtz P">P Hugenholtz</name></author><author><name sortKey="Rubin, Em" uniqKey="Rubin E">EM Rubin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tyson, Gw" uniqKey="Tyson G">GW Tyson</name></author><author><name sortKey="Chapman, J" uniqKey="Chapman J">J Chapman</name></author><author><name sortKey="Hugenholtz, P" uniqKey="Hugenholtz P">P Hugenholtz</name></author><author><name sortKey="Allen, Ee" uniqKey="Allen E">EE Allen</name></author><author><name sortKey="Ram, Rj" uniqKey="Ram R">RJ Ram</name></author><author><name sortKey="Richardson, Pm" uniqKey="Richardson P">PM Richardson</name></author><author><name sortKey="Solovyev, Vv" uniqKey="Solovyev V">VV Solovyev</name></author><author><name sortKey="Rubin, Em" uniqKey="Rubin E">EM Rubin</name></author><author><name sortKey="Rokhsar, Ds" uniqKey="Rokhsar D">DS Rokhsar</name></author><author><name sortKey="Banfield, Jf" uniqKey="Banfield J">JF Banfield</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Naviaux, Rk" uniqKey="Naviaux R">RK Naviaux</name></author><author><name sortKey="Good, B" uniqKey="Good B">B Good</name></author><author><name sortKey="Mcpherson, Jd" uniqKey="Mcpherson J">JD McPherson</name></author><author><name sortKey="Steffen, Dl" uniqKey="Steffen D">DL Steffen</name></author><author><name sortKey="Markusic, D" uniqKey="Markusic D">D Markusic</name></author><author><name sortKey="Ransom, B" uniqKey="Ransom B">B Ransom</name></author><author><name sortKey="Corbeil, J" uniqKey="Corbeil J">J Corbeil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cho, I" uniqKey="Cho I">I Cho</name></author><author><name sortKey="Blaser, Mj" uniqKey="Blaser M">MJ Blaser</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gill, Sr" uniqKey="Gill S">SR Gill</name></author><author><name sortKey="Pop, M" uniqKey="Pop M">M Pop</name></author><author><name sortKey="Deboy, Rt" uniqKey="Deboy R">RT Deboy</name></author><author><name sortKey="Eckburg, Pb" uniqKey="Eckburg P">PB Eckburg</name></author><author><name sortKey="Turnbaugh, Pj" uniqKey="Turnbaugh P">PJ Turnbaugh</name></author><author><name sortKey="Samuel, Bs" uniqKey="Samuel B">BS Samuel</name></author><author><name sortKey="Gordon, Ji" uniqKey="Gordon J">JI Gordon</name></author><author><name sortKey="Relman, Da" uniqKey="Relman D">DA Relman</name></author><author><name sortKey="Fraser Liggett, Cm" uniqKey="Fraser Liggett C">CM Fraser-Liggett</name></author><author><name sortKey="Nelson, Ke" uniqKey="Nelson K">KE Nelson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Qin, J" uniqKey="Qin J">J Qin</name></author><author><name sortKey="Li, R" uniqKey="Li R">R Li</name></author><author><name sortKey="Raes, J" uniqKey="Raes J">J Raes</name></author><author><name sortKey="Arumugam, M" uniqKey="Arumugam M">M Arumugam</name></author><author><name sortKey="Burgdorf, Ks" uniqKey="Burgdorf K">KS Burgdorf</name></author><author><name sortKey="Manichanh, C" uniqKey="Manichanh C">C Manichanh</name></author><author><name sortKey="Nielsen, T" uniqKey="Nielsen T">T Nielsen</name></author><author><name sortKey="Pons, N" uniqKey="Pons N">N Pons</name></author><author><name sortKey="Levenez, F" uniqKey="Levenez F">F Levenez</name></author><author><name sortKey="Yamada, T" uniqKey="Yamada T">T Yamada</name></author><author><name sortKey="Mende, Dr" uniqKey="Mende D">DR Mende</name></author><author><name sortKey="Li, J" uniqKey="Li J">J Li</name></author><author><name sortKey="Xu, J" uniqKey="Xu J">J Xu</name></author><author><name sortKey="Li, S" uniqKey="Li S">S Li</name></author><author><name sortKey="Li, D" uniqKey="Li D">D Li</name></author><author><name sortKey="Cao, J" uniqKey="Cao J">J Cao</name></author><author><name sortKey="Wang, B" uniqKey="Wang B">B Wang</name></author><author><name sortKey="Liang, H" uniqKey="Liang H">H Liang</name></author><author><name sortKey="Zheng, H" uniqKey="Zheng H">H Zheng</name></author><author><name sortKey="Xie, Y" uniqKey="Xie Y">Y Xie</name></author><author><name sortKey="Tap, J" uniqKey="Tap J">J Tap</name></author><author><name sortKey="Lepage, P" uniqKey="Lepage P">P Lepage</name></author><author><name sortKey="Bertalan, M" uniqKey="Bertalan M">M Bertalan</name></author><author><name sortKey="Batto, Jm" uniqKey="Batto J">JM Batto</name></author><author><name sortKey="Hansen, T" uniqKey="Hansen T">T Hansen</name></author><author><name sortKey="Le Paslier, D" uniqKey="Le Paslier D">D Le Paslier</name></author><author><name sortKey="Linneberg, A" uniqKey="Linneberg A">A Linneberg</name></author><author><name sortKey="Nielsen, Hb" uniqKey="Nielsen H">HB Nielsen</name></author><author><name sortKey="Pelletier, E" uniqKey="Pelletier E">E Pelletier</name></author><author><name sortKey="Renault, P" uniqKey="Renault P">P Renault</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Arumugam, M" uniqKey="Arumugam M">M Arumugam</name></author><author><name sortKey="Raes, J" uniqKey="Raes J">J Raes</name></author><author><name sortKey="Pelletier, E" uniqKey="Pelletier E">E Pelletier</name></author><author><name sortKey="Le Paslier, D" uniqKey="Le Paslier D">D Le Paslier</name></author><author><name sortKey="Yamada, T" uniqKey="Yamada T">T Yamada</name></author><author><name sortKey="Mende, Dr" uniqKey="Mende D">DR Mende</name></author><author><name sortKey="Fernandes, Gr" uniqKey="Fernandes G">GR Fernandes</name></author><author><name sortKey="Tap, J" uniqKey="Tap J">J Tap</name></author><author><name sortKey="Bruls, T" uniqKey="Bruls T">T Bruls</name></author><author><name sortKey="Batto, Jmm" uniqKey="Batto J">JMM Batto</name></author><author><name sortKey="Bertalan, M" uniqKey="Bertalan M">M Bertalan</name></author><author><name sortKey="Borruel, N" uniqKey="Borruel N">N Borruel</name></author><author><name sortKey="Casellas, F" uniqKey="Casellas F">F Casellas</name></author><author><name sortKey="Fernandez, L" uniqKey="Fernandez L">L Fernandez</name></author><author><name sortKey="Gautier, L" uniqKey="Gautier L">L Gautier</name></author><author><name sortKey="Hansen, T" uniqKey="Hansen T">T Hansen</name></author><author><name sortKey="Hattori, M" uniqKey="Hattori M">M Hattori</name></author><author><name sortKey="Hayashi, T" uniqKey="Hayashi T">T Hayashi</name></author><author><name sortKey="Kleerebezem, M" uniqKey="Kleerebezem M">M Kleerebezem</name></author><author><name sortKey="Kurokawa, K" uniqKey="Kurokawa K">K Kurokawa</name></author><author><name sortKey="Leclerc, M" uniqKey="Leclerc M">M Leclerc</name></author><author><name sortKey="Levenez, F" uniqKey="Levenez F">F Levenez</name></author><author><name sortKey="Manichanh, C" uniqKey="Manichanh C">C Manichanh</name></author><author><name sortKey="Nielsen, Hb" uniqKey="Nielsen H">HB Nielsen</name></author><author><name sortKey="Nielsen, T" uniqKey="Nielsen T">T Nielsen</name></author><author><name sortKey="Pons, N" uniqKey="Pons N">N Pons</name></author><author><name sortKey="Poulain, J" uniqKey="Poulain J">J Poulain</name></author><author><name sortKey="Qin, J" uniqKey="Qin J">J Qin</name></author><author><name sortKey="Sicheritz Ponten, T" uniqKey="Sicheritz Ponten T">T Sicheritz-Ponten</name></author><author><name sortKey="Tims, S" uniqKey="Tims S">S Tims</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Consortium, Thmp" uniqKey="Consortium T">THMP Consortium</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schloss, Pd" uniqKey="Schloss P">PD Schloss</name></author><author><name sortKey="Handelsman, J" uniqKey="Handelsman J">J Handelsman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, B" uniqKey="Liu B">B Liu</name></author><author><name sortKey="Gibbons, T" uniqKey="Gibbons T">T Gibbons</name></author><author><name sortKey="Ghodsi, M" uniqKey="Ghodsi M">M Ghodsi</name></author><author><name sortKey="Pop, M" uniqKey="Pop M">M Pop</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name></author><author><name sortKey="Waldron, L" uniqKey="Waldron L">L Waldron</name></author><author><name sortKey="Ballarini, A" uniqKey="Ballarini A">A Ballarini</name></author><author><name sortKey="Narasimhan, V" uniqKey="Narasimhan V">V Narasimhan</name></author><author><name sortKey="Jousson, O" uniqKey="Jousson O">O Jousson</name></author><author><name sortKey="Huttenhower, C" uniqKey="Huttenhower C">C Huttenhower</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mcdonald, D" uniqKey="Mcdonald D">D McDonald</name></author><author><name sortKey="Price, Mn" uniqKey="Price M">MN Price</name></author><author><name sortKey="Goodrich, J" uniqKey="Goodrich J">J Goodrich</name></author><author><name sortKey="Nawrocki, Ep" uniqKey="Nawrocki E">EP Nawrocki</name></author><author><name sortKey="Desantis, Tz" uniqKey="Desantis T">TZ DeSantis</name></author><author><name sortKey="Probst, A" uniqKey="Probst A">A Probst</name></author><author><name sortKey="Andersen, Gl" uniqKey="Andersen G">GL Andersen</name></author><author><name sortKey="Knight, R" uniqKey="Knight R">R Knight</name></author><author><name sortKey="Hugenholtz, P" uniqKey="Hugenholtz P">P Hugenholtz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ashburner, M" uniqKey="Ashburner M">M Ashburner</name></author><author><name sortKey="Ball, Ca" uniqKey="Ball C">CA Ball</name></author><author><name sortKey="Blake, Ja" uniqKey="Blake J">JA Blake</name></author><author><name sortKey="Botstein, D" uniqKey="Botstein D">D Botstein</name></author><author><name sortKey="Butler, H" uniqKey="Butler H">H Butler</name></author><author><name sortKey="Cherry, Jm" uniqKey="Cherry J">JM Cherry</name></author><author><name sortKey="Davis, Ap" uniqKey="Davis A">AP Davis</name></author><author><name sortKey="Dolinski, K" uniqKey="Dolinski K">K Dolinski</name></author><author><name sortKey="Dwight, Ss" uniqKey="Dwight S">SS Dwight</name></author><author><name sortKey="Eppig, Jt" uniqKey="Eppig J">JT Eppig</name></author><author><name sortKey="Harris, Ma" uniqKey="Harris M">MA Harris</name></author><author><name sortKey="Hill, Dp" uniqKey="Hill D">DP Hill</name></author><author><name sortKey="Issel Tarver, L" uniqKey="Issel Tarver L">L Issel-Tarver</name></author><author><name sortKey="Kasarskis, A" uniqKey="Kasarskis A">A Kasarskis</name></author><author><name sortKey="Lewis, S" uniqKey="Lewis S">S Lewis</name></author><author><name sortKey="Matese, Jc" uniqKey="Matese J">JC Matese</name></author><author><name sortKey="Richardson, Je" uniqKey="Richardson J">JE Richardson</name></author><author><name sortKey="Ringwald, M" uniqKey="Ringwald M">M Ringwald</name></author><author><name sortKey="Rubin, Gm" uniqKey="Rubin G">GM Rubin</name></author><author><name sortKey="Sherlock, G" uniqKey="Sherlock G">G Sherlock</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Simpson, Jt" uniqKey="Simpson J">JT Simpson</name></author><author><name sortKey="Wong, K" uniqKey="Wong K">K Wong</name></author><author><name sortKey="Jackman, Sd" uniqKey="Jackman S">SD Jackman</name></author><author><name sortKey="Schein, Je" uniqKey="Schein J">JE Schein</name></author><author><name sortKey="Jones, Sjm" uniqKey="Jones S">SJM Jones</name></author><author><name sortKey="Birol, I" uniqKey="Birol I">I Birol</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Boisvert, S" uniqKey="Boisvert S">S Boisvert</name></author><author><name sortKey="Laviolette, F" uniqKey="Laviolette F">F Laviolette</name></author><author><name sortKey="Corbeil, J" uniqKey="Corbeil J">J Corbeil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schatz, Mc" uniqKey="Schatz M">MC Schatz</name></author><author><name sortKey="Langmead, B" uniqKey="Langmead B">B Langmead</name></author><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Huson, Dh" uniqKey="Huson D">DH Huson</name></author><author><name sortKey="Mitra, S" uniqKey="Mitra S">S Mitra</name></author><author><name sortKey="Ruscheweyh, Hj" uniqKey="Ruscheweyh H">HJ Ruscheweyh</name></author><author><name sortKey="Weber, N" uniqKey="Weber N">N Weber</name></author><author><name sortKey="Schuster, Sc" uniqKey="Schuster S">SC Schuster</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Meyer, F" uniqKey="Meyer F">F Meyer</name></author><author><name sortKey="Paarmann, D" uniqKey="Paarmann D">D Paarmann</name></author><author><name sortKey="D Souza, M" uniqKey="D Souza M">M D'Souza</name></author><author><name sortKey="Olson, R" uniqKey="Olson R">R Olson</name></author><author><name sortKey="Glass, Em" uniqKey="Glass E">EM Glass</name></author><author><name sortKey="Kubal, M" uniqKey="Kubal M">M Kubal</name></author><author><name sortKey="Paczian, T" uniqKey="Paczian T">T Paczian</name></author><author><name sortKey="Rodriguez, A" uniqKey="Rodriguez A">A Rodriguez</name></author><author><name sortKey="Stevens, R" uniqKey="Stevens R">R Stevens</name></author><author><name sortKey="Wilke, A" uniqKey="Wilke A">A Wilke</name></author><author><name sortKey="Wilkening, J" uniqKey="Wilkening J">J Wilkening</name></author><author><name sortKey="Edwards, Ra" uniqKey="Edwards R">RA Edwards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dixon, P" uniqKey="Dixon P">P Dixon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Caporaso, Jg" uniqKey="Caporaso J">JG Caporaso</name></author><author><name sortKey="Kuczynski, J" uniqKey="Kuczynski J">J Kuczynski</name></author><author><name sortKey="Stombaugh, J" uniqKey="Stombaugh J">J Stombaugh</name></author><author><name sortKey="Bittinger, K" uniqKey="Bittinger K">K Bittinger</name></author><author><name sortKey="Bushman, Fd" uniqKey="Bushman F">FD Bushman</name></author><author><name sortKey="Costello, Ek" uniqKey="Costello E">EK Costello</name></author><author><name sortKey="Fierer, N" uniqKey="Fierer N">N Fierer</name></author><author><name sortKey="Pena, Ag" uniqKey="Pena A">AG Pena</name></author><author><name sortKey="Goodrich, Jk" uniqKey="Goodrich J">JK Goodrich</name></author><author><name sortKey="Gordon, Ji" uniqKey="Gordon J">JI Gordon</name></author><author><name sortKey="Huttley, Ga" uniqKey="Huttley G">GA Huttley</name></author><author><name sortKey="Kelley, St" uniqKey="Kelley S">ST Kelley</name></author><author><name sortKey="Knights, D" uniqKey="Knights D">D Knights</name></author><author><name sortKey="Koenig, Je" uniqKey="Koenig J">JE Koenig</name></author><author><name sortKey="Ley, Re" uniqKey="Ley R">RE Ley</name></author><author><name sortKey="Lozupone, Ca" uniqKey="Lozupone C">CA Lozupone</name></author><author><name sortKey="Mcdonald, D" uniqKey="Mcdonald D">D McDonald</name></author><author><name sortKey="Muegge, Bd" uniqKey="Muegge B">BD Muegge</name></author><author><name sortKey="Pirrung, M" uniqKey="Pirrung M">M Pirrung</name></author><author><name sortKey="Reeder, J" uniqKey="Reeder J">J Reeder</name></author><author><name sortKey="Sevinsky, Jr" uniqKey="Sevinsky J">JR Sevinsky</name></author><author><name sortKey="Turnbaugh, Pj" uniqKey="Turnbaugh P">PJ Turnbaugh</name></author><author><name sortKey="Walters, Wa" uniqKey="Walters W">WA Walters</name></author><author><name sortKey="Widmann, J" uniqKey="Widmann J">J Widmann</name></author><author><name sortKey="Yatsunenko, T" uniqKey="Yatsunenko T">T Yatsunenko</name></author><author><name sortKey="Zaneveld, J" uniqKey="Zaneveld J">J Zaneveld</name></author><author><name sortKey="Knight, R" uniqKey="Knight R">R Knight</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Krause, L" uniqKey="Krause L">L Krause</name></author><author><name sortKey="Diaz, Nn" uniqKey="Diaz N">NN Diaz</name></author><author><name sortKey="Goesmann, A" uniqKey="Goesmann A">A Goesmann</name></author><author><name sortKey="Kelley, S" uniqKey="Kelley S">S Kelley</name></author><author><name sortKey="Nattkemper, Tw" uniqKey="Nattkemper T">TW Nattkemper</name></author><author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name></author><author><name sortKey="Edwards, Ra" uniqKey="Edwards R">RA Edwards</name></author><author><name sortKey="Stoye, J" uniqKey="Stoye J">J Stoye</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Brady, A" uniqKey="Brady A">A Brady</name></author><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Namiki, T" uniqKey="Namiki T">T Namiki</name></author><author><name sortKey="Hachiya, T" uniqKey="Hachiya T">T Hachiya</name></author><author><name sortKey="Tanaka, H" uniqKey="Tanaka H">H Tanaka</name></author><author><name sortKey="Sakakibara, Y" uniqKey="Sakakibara Y">Y Sakakibara</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Peng, Y" uniqKey="Peng Y">Y Peng</name></author><author><name sortKey="Leung, Hcm" uniqKey="Leung H">HCM Leung</name></author><author><name sortKey="Yiu, Sm" uniqKey="Yiu S">SM Yiu</name></author><author><name sortKey="Chin, Fyl" uniqKey="Chin F">FYL Chin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Laserson, J" uniqKey="Laserson J">J Laserson</name></author><author><name sortKey="Jojic, V" uniqKey="Jojic V">V Jojic</name></author><author><name sortKey="Koller, D" uniqKey="Koller D">D Koller</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wu, Gd" uniqKey="Wu G">GD Wu</name></author><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author><author><name sortKey="Hoffmann, C" uniqKey="Hoffmann C">C Hoffmann</name></author><author><name sortKey="Bittinger, K" uniqKey="Bittinger K">K Bittinger</name></author><author><name sortKey="Chen, Yyy" uniqKey="Chen Y">YYY Chen</name></author><author><name sortKey="Keilbaugh, Sa" uniqKey="Keilbaugh S">SA Keilbaugh</name></author><author><name sortKey="Bewtra, M" uniqKey="Bewtra M">M Bewtra</name></author><author><name sortKey="Knights, D" uniqKey="Knights D">D Knights</name></author><author><name sortKey="Walters, Wa" uniqKey="Walters W">WA Walters</name></author><author><name sortKey="Knight, R" uniqKey="Knight R">R Knight</name></author><author><name sortKey="Sinha, R" uniqKey="Sinha R">R Sinha</name></author><author><name sortKey="Gilroy, E" uniqKey="Gilroy E">E Gilroy</name></author><author><name sortKey="Gupta, K" uniqKey="Gupta K">K Gupta</name></author><author><name sortKey="Baldassano, R" uniqKey="Baldassano R">R Baldassano</name></author><author><name sortKey="Nessel, L" uniqKey="Nessel L">L Nessel</name></author><author><name sortKey="Li, H" uniqKey="Li H">H Li</name></author><author><name sortKey="Bushman, Fd" uniqKey="Bushman F">FD Bushman</name></author><author><name sortKey="Lewis, Jd" uniqKey="Lewis J">JD Lewis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pevzner, Pa" uniqKey="Pevzner P">PA Pevzner</name></author><author><name sortKey="Tang, H" uniqKey="Tang H">H Tang</name></author><author><name sortKey="Waterman, Ms" uniqKey="Waterman M">MS Waterman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kurtz, S" uniqKey="Kurtz S">S Kurtz</name></author><author><name sortKey="Phillippy, A" uniqKey="Phillippy A">A Phillippy</name></author><author><name sortKey="Delcher, Al" uniqKey="Delcher A">AL Delcher</name></author><author><name sortKey="Smoot, M" uniqKey="Smoot M">M Smoot</name></author><author><name sortKey="Shumway, M" uniqKey="Shumway M">M Shumway</name></author><author><name sortKey="Antonescu, C" uniqKey="Antonescu C">C Antonescu</name></author><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schadt, Ee" uniqKey="Schadt E">EE Schadt</name></author><author><name sortKey="Linderman, Md" uniqKey="Linderman M">MD Linderman</name></author><author><name sortKey="Sorenson, J" uniqKey="Sorenson J">J Sorenson</name></author><author><name sortKey="Lee, L" uniqKey="Lee L">L Lee</name></author><author><name sortKey="Nolan, Gp" uniqKey="Nolan G">GP Nolan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Barabasi, Al" uniqKey="Barabasi A">AL Barabasi</name></author><author><name sortKey="Oltvai, Zn" uniqKey="Oltvai Z">ZN Oltvai</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Benson, Da" uniqKey="Benson D">DA Benson</name></author><author><name sortKey="Boguski, Ms" uniqKey="Boguski M">MS Boguski</name></author><author><name sortKey="Lipman, Dj" uniqKey="Lipman D">DJ Lipman</name></author><author><name sortKey="Ostell, J" uniqKey="Ostell J">J Ostell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kulikova, T" uniqKey="Kulikova T">T Kulikova</name></author><author><name sortKey="Aldebert, P" uniqKey="Aldebert P">P Aldebert</name></author><author><name sortKey="Althorpe, N" uniqKey="Althorpe N">N Althorpe</name></author><author><name sortKey="Baker, W" uniqKey="Baker W">W Baker</name></author><author><name sortKey="Bates, K" uniqKey="Bates K">K Bates</name></author><author><name sortKey="Browne, P" uniqKey="Browne P">P Browne</name></author><author><name sortKey="Van Den Broek, A" uniqKey="Van Den Broek A">A van den Broek</name></author><author><name sortKey="Cochrane, G" uniqKey="Cochrane G">G Cochrane</name></author><author><name sortKey="Duggan, K" uniqKey="Duggan K">K Duggan</name></author><author><name sortKey="Eberhardt, R" uniqKey="Eberhardt R">R Eberhardt</name></author><author><name sortKey="Faruque, N" uniqKey="Faruque N">N Faruque</name></author><author><name sortKey="Garcia Pastor, M" uniqKey="Garcia Pastor M">M Garcia-Pastor</name></author><author><name sortKey="Harte, N" uniqKey="Harte N">N Harte</name></author><author><name sortKey="Kanz, C" uniqKey="Kanz C">C Kanz</name></author><author><name sortKey="Leinonen, R" uniqKey="Leinonen R">R Leinonen</name></author><author><name sortKey="Lin, Q" uniqKey="Lin Q">Q Lin</name></author><author><name sortKey="Lombard, V" uniqKey="Lombard V">V Lombard</name></author><author><name sortKey="Lopez, R" uniqKey="Lopez R">R Lopez</name></author><author><name sortKey="Mancuso, R" uniqKey="Mancuso R">R Mancuso</name></author><author><name sortKey="Mchale, M" uniqKey="Mchale M">M McHale</name></author><author><name sortKey="Nardone, F" uniqKey="Nardone F">F Nardone</name></author><author><name sortKey="Silventoinen, V" uniqKey="Silventoinen V">V Silventoinen</name></author><author><name sortKey="Stoehr, P" uniqKey="Stoehr P">P Stoehr</name></author><author><name sortKey="Stoesser, G" uniqKey="Stoesser G">G Stoesser</name></author><author><name sortKey="Ann, M" uniqKey="Ann M">M Ann</name></author><author><name sortKey="Tzouvara, K" uniqKey="Tzouvara K">K Tzouvara</name></author><author><name sortKey="Vaughan, R" uniqKey="Vaughan R">R Vaughan</name></author><author><name sortKey="Wu, D" uniqKey="Wu D">D Wu</name></author><author><name sortKey="Zhu, W" uniqKey="Zhu W">W Zhu</name></author><author><name sortKey="Apweiler, R" uniqKey="Apweiler R">R Apweiler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Camon, E" uniqKey="Camon E">E Camon</name></author><author><name sortKey="Magrane, M" uniqKey="Magrane M">M Magrane</name></author><author><name sortKey="Barrell, D" uniqKey="Barrell D">D Barrell</name></author><author><name sortKey="Lee, V" uniqKey="Lee V">V Lee</name></author><author><name sortKey="Dimmer, E" uniqKey="Dimmer E">E Dimmer</name></author><author><name sortKey="Maslen, J" uniqKey="Maslen J">J Maslen</name></author><author><name sortKey="Binns, D" uniqKey="Binns D">D Binns</name></author><author><name sortKey="Harte, N" uniqKey="Harte N">N Harte</name></author><author><name sortKey="Lopez, R" uniqKey="Lopez R">R Lopez</name></author><author><name sortKey="Apweiler, R" uniqKey="Apweiler R">R Apweiler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gabriel, E" uniqKey="Gabriel E">E Gabriel</name></author><author><name sortKey="Fagg, G" uniqKey="Fagg G">G Fagg</name></author><author><name sortKey="Bosilca, G" uniqKey="Bosilca G">G Bosilca</name></author><author><name sortKey="Angskun, T" uniqKey="Angskun T">T Angskun</name></author><author><name sortKey="Dongarra, J" uniqKey="Dongarra J">J Dongarra</name></author><author><name sortKey="Squyres, J" uniqKey="Squyres J">J Squyres</name></author><author><name sortKey="Sahay, V" uniqKey="Sahay V">V Sahay</name></author><author><name sortKey="Kambadur, P" uniqKey="Kambadur P">P Kambadur</name></author><author><name sortKey="Barrett, B" uniqKey="Barrett B">B Barrett</name></author><author><name sortKey="Lumsdaine, A" uniqKey="Lumsdaine A">A Lumsdaine</name></author><author><name sortKey="Castain, R" uniqKey="Castain R">R Castain</name></author><author><name sortKey="Daniel, D" uniqKey="Daniel D">D Daniel</name></author><author><name sortKey="Graham, R" uniqKey="Graham R">R Graham</name></author><author><name sortKey="Woodall, T" uniqKey="Woodall T">T Woodall</name></author><author><name sortKey="Gabriel, E" uniqKey="Gabriel E">E Gabriel</name></author><author><name sortKey="Fagg, Ge" uniqKey="Fagg G">GE Fagg</name></author><author><name sortKey="Bosilca, G" uniqKey="Bosilca G">G Bosilca</name></author><author><name sortKey="Angskun, T" uniqKey="Angskun T">T Angskun</name></author><author><name sortKey="Dongarra, Jj" uniqKey="Dongarra J">JJ Dongarra</name></author><author><name sortKey="Squyres, Jm" uniqKey="Squyres J">JM Squyres</name></author><author><name sortKey="Sahay, V" uniqKey="Sahay V">V Sahay</name></author><author><name sortKey="Kambadur, P" uniqKey="Kambadur P">P Kambadur</name></author><author><name sortKey="Barrett, B" uniqKey="Barrett B">B Barrett</name></author><author><name sortKey="Lumsdaine, A" uniqKey="Lumsdaine A">A Lumsdaine</name></author><author><name sortKey="Castain, Rh" uniqKey="Castain R">RH Castain</name></author><author><name sortKey="Daniel, Dj" uniqKey="Daniel D">DJ Daniel</name></author><author><name sortKey="Graham, Rl" uniqKey="Graham R">RL Graham</name></author><author><name sortKey="Woodall, Ts" uniqKey="Woodall T">TS Woodall</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gropp, W" uniqKey="Gropp W">W Gropp</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kale, Lv" uniqKey="Kale L">LV Kale</name></author><author><name sortKey="Krishnan, S" uniqKey="Krishnan S">S Krishnan</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Canada</li></country></list><tree><country name="Canada"><noRegion><name sortKey="Boisvert, Sebastien" sort="Boisvert, Sebastien" uniqKey="Boisvert S" first="Sébastien" last="Boisvert">Sébastien Boisvert</name></noRegion><name sortKey="Boisvert, Sebastien" sort="Boisvert, Sebastien" uniqKey="Boisvert S" first="Sébastien" last="Boisvert">Sébastien Boisvert</name><name sortKey="Corbeil, Jacques" sort="Corbeil, Jacques" uniqKey="Corbeil J" first="Jacques" last="Corbeil">Jacques Corbeil</name><name sortKey="Corbeil, Jacques" sort="Corbeil, Jacques" uniqKey="Corbeil J" first="Jacques" last="Corbeil">Jacques Corbeil</name><name sortKey="Godzaridis, Elenie" sort="Godzaridis, Elenie" uniqKey="Godzaridis E" first="Élénie" last="Godzaridis">Élénie Godzaridis</name><name sortKey="Laviolette, Francois" sort="Laviolette, Francois" uniqKey="Laviolette F" first="François" last="Laviolette">François Laviolette</name><name sortKey="Raymond, Frederic" sort="Raymond, Frederic" uniqKey="Raymond F" first="Frédéric" last="Raymond">Frédéric Raymond</name><name sortKey="Raymond, Frederic" sort="Raymond, Frederic" uniqKey="Raymond F" first="Frédéric" last="Raymond">Frédéric Raymond</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002217 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 002217 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= MersV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= PMC:4056372
|texte= Ray Meta: scalable de novo metagenome assembly and profiling
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:23259615" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a MersV1
| This area was generated with Dilib version V0.6.33. |  |