Global Vectors Representation of Protein Sequences and Its Application for Predicting Self-Interacting Proteins with Multi-Grained Cascade Forest Model
Identifieur interne : 000554 ( Main/Exploration ); précédent : 000553; suivant : 000555Global Vectors Representation of Protein Sequences and Its Application for Predicting Self-Interacting Proteins with Multi-Grained Cascade Forest Model
Auteurs : Zhan-Heng Chen [République populaire de Chine] ; Zhu-Hong You [République populaire de Chine] ; Wen-Bo Zhang [République populaire de Chine] ; Yan-Bin Wang ; Li Cheng [République populaire de Chine] ; Daniyal AlghazzawiSource :
- Genes [ 2073-4425 ] ; 2019.
Abstract
Self-interacting proteins (SIPs) is of paramount importance in current molecular biology. There have been developed a number of traditional biological experiment methods for predicting SIPs in the past few years. However, these methods are costly, time-consuming and inefficient, and often limit their usage for predicting SIPs. Therefore, the development of computational method emerges at the times require. In this paper, we for the first time proposed a novel deep learning model which combined natural language processing (NLP) method for potential SIPs prediction from the protein sequence information. More specifically, the protein sequence is de novo assembled by
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DOI: 10.3390/genes10110924
PubMed: 31726752
PubMed Central: 6896115
Affiliations:
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(W.-B.Z.);<email>wangyanbin15@mails.ucas.ac.cn</email> (Y.-B.W.);<email>chengli@ms.xjb.ac.cn</email> (L.C.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-genes-10-00924">University of Chinese Academy of Sciences, Beijing 100049, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>University of Chinese Academy of Sciences, Beijing 100049</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="You, Zhu Hong" sort="You, Zhu Hong" uniqKey="You Z" first="Zhu-Hong" last="You">Zhu-Hong You</name><affiliation><nlm:aff id="af1-genes-10-00924">The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China;<email>chenzhanheng17@mails.ucas.ac.cn</email> (Z.-H.C.);<email>zhang_wen_bo@foxmail.com</email> (W.-B.Z.);<email>wangyanbin15@mails.ucas.ac.cn</email> (Y.-B.W.);<email>chengli@ms.xjb.ac.cn</email> (L.C.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-genes-10-00924">University of Chinese Academy of Sciences, Beijing 100049, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>University of Chinese Academy of Sciences, Beijing 100049</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Zhang, Wen Bo" sort="Zhang, Wen Bo" uniqKey="Zhang W" first="Wen-Bo" last="Zhang">Wen-Bo Zhang</name><affiliation><nlm:aff id="af1-genes-10-00924">The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China;<email>chenzhanheng17@mails.ucas.ac.cn</email> (Z.-H.C.);<email>zhang_wen_bo@foxmail.com</email> (W.-B.Z.);<email>wangyanbin15@mails.ucas.ac.cn</email> (Y.-B.W.);<email>chengli@ms.xjb.ac.cn</email> (L.C.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-genes-10-00924">University of Chinese Academy of Sciences, Beijing 100049, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>University of Chinese Academy of Sciences, Beijing 100049</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Wang, Yan Bin" sort="Wang, Yan Bin" uniqKey="Wang Y" first="Yan-Bin" last="Wang">Yan-Bin Wang</name><affiliation><nlm:aff id="af1-genes-10-00924">The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China;<email>chenzhanheng17@mails.ucas.ac.cn</email> (Z.-H.C.);<email>zhang_wen_bo@foxmail.com</email> (W.-B.Z.);<email>wangyanbin15@mails.ucas.ac.cn</email> (Y.-B.W.);<email>chengli@ms.xjb.ac.cn</email> (L.C.)</nlm:aff></affiliation></author><author><name sortKey="Cheng, Li" sort="Cheng, Li" uniqKey="Cheng L" first="Li" last="Cheng">Li Cheng</name><affiliation><nlm:aff id="af1-genes-10-00924">The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China;<email>chenzhanheng17@mails.ucas.ac.cn</email> (Z.-H.C.);<email>zhang_wen_bo@foxmail.com</email> (W.-B.Z.);<email>wangyanbin15@mails.ucas.ac.cn</email> (Y.-B.W.);<email>chengli@ms.xjb.ac.cn</email> (L.C.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-genes-10-00924">University of Chinese Academy of Sciences, Beijing 100049, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>University of Chinese Academy of Sciences, Beijing 100049</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Alghazzawi, Daniyal" sort="Alghazzawi, Daniyal" uniqKey="Alghazzawi D" first="Daniyal" last="Alghazzawi">Daniyal Alghazzawi</name><affiliation><nlm:aff id="af3-genes-10-00924">Department of Information Systems, King Abdulaziz University, Jeddah 21589, Saudi Arabia;<email>dghazzawi@kau.edu.sa</email></nlm:aff></affiliation></author></analytic><series><title level="j">Genes</title><idno type="eISSN">2073-4425</idno><imprint><date when="2019">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Self-interacting proteins (SIPs) is of paramount importance in current molecular biology. There have been developed a number of traditional biological experiment methods for predicting SIPs in the past few years. However, these methods are costly, time-consuming and inefficient, and often limit their usage for predicting SIPs. Therefore, the development of computational method emerges at the times require. In this paper, we for the first time proposed a novel deep learning model which combined natural language processing (NLP) method for potential SIPs prediction from the protein sequence information. More specifically, the protein sequence is de novo assembled by <italic>k-mers</italic>. Then, we obtained the global vectors representation for each protein sequences by using natural language processing (NLP) technique. Finally, based on the knowledge of known self-interacting and non-interacting proteins, a multi-grained cascade forest model is trained to predict SIPs. Comprehensive experiments were performed on <italic>yeast</italic> and <italic>human</italic> datasets, which obtained an accuracy rate of 91.45% and 93.12%, respectively. From our evaluations, the experimental results show that the use of amino acid semantics information is very helpful for addressing the problem of sequences containing both self-interacting and non-interacting pairs of proteins. This work would have potential applications for various biological classification problems.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Y Ld R M, M A" uniqKey="Y Ld R M M">M.A. Yıldırım</name></author><author><name sortKey="Goh, K I" uniqKey="Goh K">K.-I. Goh</name></author><author><name sortKey="Cusick, M E" uniqKey="Cusick M">M.E. Cusick</name></author><author><name sortKey="Barabasi, A L" uniqKey="Barabasi A">A.-L. Barabási</name></author><author><name sortKey="Vidal, M" uniqKey="Vidal M">M. Vidal</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Radivojac, P" uniqKey="Radivojac P">P. Radivojac</name></author><author><name sortKey="Clark, W T" uniqKey="Clark W">W.T. Clark</name></author><author><name sortKey="Oron, T R" uniqKey="Oron T">T.R. Oron</name></author><author><name sortKey="Schnoes, A M" uniqKey="Schnoes A">A.M. Schnoes</name></author><author><name sortKey="Wittkop, T" uniqKey="Wittkop T">T. Wittkop</name></author><author><name sortKey="Sokolov, A" uniqKey="Sokolov A">A. Sokolov</name></author><author><name sortKey="Graim, K" uniqKey="Graim K">K. Graim</name></author><author><name sortKey="Funk, C" uniqKey="Funk C">C. Funk</name></author><author><name sortKey="Verspoor, K" uniqKey="Verspoor K">K. Verspoor</name></author><author><name sortKey="Ben Hur, A" uniqKey="Ben Hur A">A. Ben-Hur</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cao, R" uniqKey="Cao R">R. Cao</name></author><author><name sortKey="Cheng, J" uniqKey="Cheng J">J. Cheng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ispolatov, I" uniqKey="Ispolatov I">I. Ispolatov</name></author><author><name sortKey="Yuryev, A" uniqKey="Yuryev A">A. Yuryev</name></author><author><name sortKey="Mazo, I" uniqKey="Mazo I">I. Mazo</name></author><author><name sortKey="Maslov, S" uniqKey="Maslov S">S. Maslov</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Shoemaker, B" uniqKey="Shoemaker B">B. Shoemaker</name></author><author><name sortKey="Panchenko, A" uniqKey="Panchenko A">A. Panchenko</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Reguly, T" uniqKey="Reguly T">T. Reguly</name></author><author><name sortKey="Breitkreutz, A" uniqKey="Breitkreutz A">A. Breitkreutz</name></author><author><name sortKey="Boucher, L" uniqKey="Boucher L">L. Boucher</name></author><author><name sortKey="Breitkreutz, B J" uniqKey="Breitkreutz B">B.-J. Breitkreutz</name></author><author><name sortKey="Hon, G C" uniqKey="Hon G">G.C. Hon</name></author><author><name sortKey="Myers, C L" uniqKey="Myers C">C.L. Myers</name></author><author><name sortKey="Parsons, A" uniqKey="Parsons A">A. Parsons</name></author><author><name sortKey="Friesen, H" uniqKey="Friesen H">H. Friesen</name></author><author><name sortKey="Oughtred, R" uniqKey="Oughtred R">R. Oughtred</name></author><author><name sortKey="Tong, A" uniqKey="Tong A">A. Tong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Salwinski, L" uniqKey="Salwinski L">L. Salwinski</name></author><author><name sortKey="Miller, C S" uniqKey="Miller C">C.S. Miller</name></author><author><name sortKey="Smith, A J" uniqKey="Smith A">A.J. Smith</name></author><author><name sortKey="Pettit, F K" uniqKey="Pettit F">F.K. Pettit</name></author><author><name sortKey="Bowie, J U" uniqKey="Bowie J">J.U. Bowie</name></author><author><name sortKey="Eisenberg, D" uniqKey="Eisenberg D">D. Eisenberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chatr Aryamontri, A" uniqKey="Chatr Aryamontri A">A. Chatr-Aryamontri</name></author><author><name sortKey="Oughtred, R" uniqKey="Oughtred R">R. Oughtred</name></author><author><name sortKey="Boucher, L" uniqKey="Boucher L">L. Boucher</name></author><author><name sortKey="Rust, J" uniqKey="Rust J">J. Rust</name></author><author><name sortKey="Chang, C" uniqKey="Chang C">C. Chang</name></author><author><name sortKey="Kolas, N K" uniqKey="Kolas N">N.K. Kolas</name></author><author><name sortKey="O Onnell, L" uniqKey="O Onnell L">L. O’Donnell</name></author><author><name sortKey="Oster, S" uniqKey="Oster S">S. Oster</name></author><author><name sortKey="Theesfeld, C" uniqKey="Theesfeld C">C. Theesfeld</name></author><author><name sortKey="Sellam, A" uniqKey="Sellam A">A. Sellam</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Szklarczyk, D" uniqKey="Szklarczyk D">D. Szklarczyk</name></author><author><name sortKey="Morris, J H" uniqKey="Morris J">J.H. Morris</name></author><author><name sortKey="Cook, H" uniqKey="Cook H">H. Cook</name></author><author><name sortKey="Kuhn, M" uniqKey="Kuhn M">M. Kuhn</name></author><author><name sortKey="Wyder, S" uniqKey="Wyder S">S. Wyder</name></author><author><name sortKey="Simonovic, M" uniqKey="Simonovic M">M. Simonovic</name></author><author><name sortKey="Santos, A" uniqKey="Santos A">A. Santos</name></author><author><name sortKey="Doncheva, N T" uniqKey="Doncheva N">N.T. Doncheva</name></author><author><name sortKey="Roth, A" uniqKey="Roth A">A. Roth</name></author><author><name sortKey="Bork, P" uniqKey="Bork P">P. Bork</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, X" uniqKey="Liu X">X. Liu</name></author><author><name sortKey="Yang, S" uniqKey="Yang S">S. Yang</name></author><author><name sortKey="Li, C" uniqKey="Li C">C. Li</name></author><author><name sortKey="Zhang, Z" uniqKey="Zhang Z">Z. Zhang</name></author><author><name sortKey="Song, J" uniqKey="Song J">J. Song</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhu, L" uniqKey="Zhu L">L. Zhu</name></author><author><name sortKey="Deng, S P" uniqKey="Deng S">S.-P. Deng</name></author><author><name sortKey="You, Z H" uniqKey="You Z">Z.-H. You</name></author><author><name sortKey="Huang, D S" uniqKey="Huang D">D.-S. Huang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, Q C" uniqKey="Zhang Q">Q.C. Zhang</name></author><author><name sortKey="Petrey, D" uniqKey="Petrey D">D. Petrey</name></author><author><name sortKey="Deng, L" uniqKey="Deng L">L. Deng</name></author><author><name sortKey="Qiang, L" uniqKey="Qiang L">L. Qiang</name></author><author><name sortKey="Shi, Y" uniqKey="Shi Y">Y. Shi</name></author><author><name sortKey="Thu, C A" uniqKey="Thu C">C.A. Thu</name></author><author><name sortKey="Bisikirska, B" uniqKey="Bisikirska B">B. Bisikirska</name></author><author><name sortKey="Lefebvre, C" uniqKey="Lefebvre C">C. Lefebvre</name></author><author><name sortKey="Accili, D" uniqKey="Accili D">D. Accili</name></author><author><name sortKey="Hunter, T" uniqKey="Hunter T">T. Hunter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="You, Z H" uniqKey="You Z">Z.-H. You</name></author><author><name sortKey="Zhou, M" uniqKey="Zhou M">M. Zhou</name></author><author><name sortKey="Luo, X" uniqKey="Luo X">X. Luo</name></author><author><name sortKey="Li, S" uniqKey="Li S">S. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="You, Z H" uniqKey="You Z">Z.-H. You</name></author><author><name sortKey="Lei, Y K" uniqKey="Lei Y">Y.-K. Lei</name></author><author><name sortKey="Gui, J" uniqKey="Gui J">J. Gui</name></author><author><name sortKey="Huang, D S" uniqKey="Huang D">D.-S. Huang</name></author><author><name sortKey="Zhou, X" uniqKey="Zhou X">X. Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jansen, R" uniqKey="Jansen R">R. Jansen</name></author><author><name sortKey="Yu, H" uniqKey="Yu H">H. Yu</name></author><author><name sortKey="Greenbaum, D" uniqKey="Greenbaum D">D. Greenbaum</name></author><author><name sortKey="Kluger, Y" uniqKey="Kluger Y">Y. Kluger</name></author><author><name sortKey="Krogan, N J" uniqKey="Krogan N">N.J. Krogan</name></author><author><name sortKey="Chung, S" uniqKey="Chung S">S. Chung</name></author><author><name sortKey="Emili, A" uniqKey="Emili A">A. Emili</name></author><author><name sortKey="Snyder, M" uniqKey="Snyder M">M. Snyder</name></author><author><name sortKey="Greenblatt, J F" uniqKey="Greenblatt J">J.F. Greenblatt</name></author><author><name sortKey="Gerstein, M" uniqKey="Gerstein M">M. Gerstein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ofran, Y" uniqKey="Ofran Y">Y. Ofran</name></author><author><name sortKey="Rost, B" uniqKey="Rost B">B. Rost</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sun, T" uniqKey="Sun T">T. Sun</name></author><author><name sortKey="Zhou, B" uniqKey="Zhou B">B. Zhou</name></author><author><name sortKey="Lai, L" uniqKey="Lai L">L. Lai</name></author><author><name sortKey="Pei, J" uniqKey="Pei J">J. Pei</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kovacs, I A" uniqKey="Kovacs I">I.A. Kovács</name></author><author><name sortKey="Luck, K" uniqKey="Luck K">K. Luck</name></author><author><name sortKey="Spirohn, K" uniqKey="Spirohn K">K. Spirohn</name></author><author><name sortKey="Wang, Y" uniqKey="Wang Y">Y. Wang</name></author><author><name sortKey="Pollis, C" uniqKey="Pollis C">C. Pollis</name></author><author><name sortKey="Schlabach, S" uniqKey="Schlabach S">S. Schlabach</name></author><author><name sortKey="Bian, W" uniqKey="Bian W">W. Bian</name></author><author><name sortKey="Kim, D K" uniqKey="Kim D">D.-K. Kim</name></author><author><name sortKey="Kishore, N" uniqKey="Kishore N">N. Kishore</name></author><author><name sortKey="Hao, T" uniqKey="Hao T">T. Hao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, Y B" uniqKey="Wang Y">Y.-B. Wang</name></author><author><name sortKey="You, Z H" uniqKey="You Z">Z.-H. You</name></author><author><name sortKey="Li, X" uniqKey="Li X">X. Li</name></author><author><name sortKey="Jiang, T H" uniqKey="Jiang T">T.-H. Jiang</name></author><author><name sortKey="Cheng, L" uniqKey="Cheng L">L. Cheng</name></author><author><name sortKey="Chen, Z H" uniqKey="Chen Z">Z.-H. Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, Z H" uniqKey="Chen Z">Z.-H. Chen</name></author><author><name sortKey="You, Z H" uniqKey="You Z">Z.-H. You</name></author><author><name sortKey="Li, L P" uniqKey="Li L">L.-P. Li</name></author><author><name sortKey="Wang, Y B" uniqKey="Wang Y">Y.-B. Wang</name></author><author><name sortKey="Wong, L" uniqKey="Wong L">L. Wong</name></author><author><name sortKey="Yi, H C" uniqKey="Yi H">H.-C. Yi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="George, A" uniqKey="George A">A. George</name></author><author><name sortKey="Ganesh, H B" uniqKey="Ganesh H">H.B. Ganesh</name></author><author><name sortKey="Kumar, M A" uniqKey="Kumar M">M.A. Kumar</name></author><author><name sortKey="Soman, K" uniqKey="Soman K">K. Soman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, Y" uniqKey="Wang Y">Y. Wang</name></author><author><name sortKey="You, Z H" uniqKey="You Z">Z.-H. You</name></author><author><name sortKey="Yang, S" uniqKey="Yang S">S. Yang</name></author><author><name sortKey="Li, X" uniqKey="Li X">X. Li</name></author><author><name sortKey="Jiang, T H" uniqKey="Jiang T">T.-H. Jiang</name></author><author><name sortKey="Zhou, X" uniqKey="Zhou X">X. Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wan, F" uniqKey="Wan F">F. Wan</name></author><author><name sortKey="Zeng, J" uniqKey="Zeng J">J. Zeng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Luo, X" uniqKey="Luo X">X. Luo</name></author><author><name sortKey="Zhou, M" uniqKey="Zhou M">M. Zhou</name></author><author><name sortKey="Xia, Y" uniqKey="Xia Y">Y. Xia</name></author><author><name sortKey="Zhu, Q" uniqKey="Zhu Q">Q. Zhu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jin, L" uniqKey="Jin L">L. Jin</name></author><author><name sortKey="Li, S" uniqKey="Li S">S. Li</name></author><author><name sortKey="La, H M" uniqKey="La H">H.M. La</name></author><author><name sortKey="Luo, X" uniqKey="Luo X">X. Luo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, W" uniqKey="Liu W">W. Liu</name></author><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author><author><name sortKey="Liu, X" uniqKey="Liu X">X. Liu</name></author><author><name sortKey="Zeng, N" uniqKey="Zeng N">N. Zeng</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Alsaadi, F E" uniqKey="Alsaadi F">F.E. Alsaadi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Breuer, K" uniqKey="Breuer K">K. Breuer</name></author><author><name sortKey="Foroushani, A K" uniqKey="Foroushani A">A.K. Foroushani</name></author><author><name sortKey="Laird, M R" uniqKey="Laird M">M.R. Laird</name></author><author><name sortKey="Chen, C" uniqKey="Chen C">C. Chen</name></author><author><name sortKey="Sribnaia, A" uniqKey="Sribnaia A">A. Sribnaia</name></author><author><name sortKey="Lo, R" uniqKey="Lo R">R. Lo</name></author><author><name sortKey="Winsor, G L" uniqKey="Winsor G">G.L. Winsor</name></author><author><name sortKey="Hancock, R E" uniqKey="Hancock R">R.E. Hancock</name></author><author><name sortKey="Brinkman, F S" uniqKey="Brinkman F">F.S. Brinkman</name></author><author><name sortKey="Lynn, D J" uniqKey="Lynn D">D.J. Lynn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Orchard, S" uniqKey="Orchard S">S. Orchard</name></author><author><name sortKey="Ammari, M" uniqKey="Ammari M">M. Ammari</name></author><author><name sortKey="Aranda, B" uniqKey="Aranda B">B. Aranda</name></author><author><name sortKey="Breuza, L" uniqKey="Breuza L">L. Breuza</name></author><author><name sortKey="Briganti, L" uniqKey="Briganti L">L. Briganti</name></author><author><name sortKey="Broackes Carter, F" uniqKey="Broackes Carter F">F. Broackes-Carter</name></author><author><name sortKey="Campbell, N H" uniqKey="Campbell N">N.H. Campbell</name></author><author><name sortKey="Chavali, G" uniqKey="Chavali G">G. Chavali</name></author><author><name sortKey="Chen, C" uniqKey="Chen C">C. Chen</name></author><author><name sortKey="Del Toro, N" uniqKey="Del Toro N">N. Del-Toro</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Clerc, O" uniqKey="Clerc O">O. Clerc</name></author><author><name sortKey="Deniaud, M" uniqKey="Deniaud M">M. Deniaud</name></author><author><name sortKey="Vallet, S D" uniqKey="Vallet S">S.D. Vallet</name></author><author><name sortKey="Naba, A" uniqKey="Naba A">A. Naba</name></author><author><name sortKey="Rivet, A" uniqKey="Rivet A">A. Rivet</name></author><author><name sortKey="Perez, S" uniqKey="Perez S">S. Perez</name></author><author><name sortKey="Thierry Mieg, N" uniqKey="Thierry Mieg N">N. Thierry-Mieg</name></author><author><name sortKey="Ricard Blum, S" uniqKey="Ricard Blum S">S. Ricard-Blum</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Muppirala, U K" uniqKey="Muppirala U">U.K. Muppirala</name></author><author><name sortKey="Honavar, V G" uniqKey="Honavar V">V.G. Honavar</name></author><author><name sortKey="Dobbs, D" uniqKey="Dobbs D">D. Dobbs</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Asgari, E" uniqKey="Asgari E">E. Asgari</name></author><author><name sortKey="Mofrad, M R" uniqKey="Mofrad M">M.R. Mofrad</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pennington, J" uniqKey="Pennington J">J. Pennington</name></author><author><name sortKey="Socher, R" uniqKey="Socher R">R. Socher</name></author><author><name sortKey="Manning, C" uniqKey="Manning C">C. Manning</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Merchant, K" uniqKey="Merchant K">K. Merchant</name></author><author><name sortKey="Pande, Y" uniqKey="Pande Y">Y. Pande</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, P" uniqKey="Liu P">P. Liu</name></author><author><name sortKey="Qiu, X" uniqKey="Qiu X">X. Qiu</name></author><author><name sortKey="Huang, X" uniqKey="Huang X">X. Huang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhou, Z H" uniqKey="Zhou Z">Z.-H. Zhou</name></author><author><name sortKey="Feng, J" uniqKey="Feng J">J. Feng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, Z H" uniqKey="Chen Z">Z.-H. Chen</name></author><author><name sortKey="Li, L P" uniqKey="Li L">L.-P. Li</name></author><author><name sortKey="He, Z" uniqKey="He Z">Z. He</name></author><author><name sortKey="Zhou, J R" uniqKey="Zhou J">J.-R. Zhou</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y. Li</name></author><author><name sortKey="Wong, L" uniqKey="Wong L">L. Wong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hinton, G" uniqKey="Hinton G">G. Hinton</name></author><author><name sortKey="Deng, L" uniqKey="Deng L">L. Deng</name></author><author><name sortKey="Yu, D" uniqKey="Yu D">D. Yu</name></author><author><name sortKey="Dahl, G" uniqKey="Dahl G">G. Dahl</name></author><author><name sortKey="Mohamed, A R" uniqKey="Mohamed A">A.-r. Mohamed</name></author><author><name sortKey="Jaitly, N" uniqKey="Jaitly N">N. Jaitly</name></author><author><name sortKey="Senior, A" uniqKey="Senior A">A. Senior</name></author><author><name sortKey="Vanhoucke, V" uniqKey="Vanhoucke V">V. Vanhoucke</name></author><author><name sortKey="Nguyen, P" uniqKey="Nguyen P">P. Nguyen</name></author><author><name sortKey="Kingsbury, B" uniqKey="Kingsbury B">B. Kingsbury</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, X" uniqKey="Liu X">X. Liu</name></author><author><name sortKey="Liu, W" uniqKey="Liu W">W. Liu</name></author><author><name sortKey="Ma, H" uniqKey="Ma H">H. Ma</name></author><author><name sortKey="Fu, H" uniqKey="Fu H">H. Fu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Z" uniqKey="Liu Z">Z. Liu</name></author><author><name sortKey="Guo, F" uniqKey="Guo F">F. Guo</name></author><author><name sortKey="Zhang, J" uniqKey="Zhang J">J. Zhang</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J. Wang</name></author><author><name sortKey="Lu, L" uniqKey="Lu L">L. Lu</name></author><author><name sortKey="Li, D" uniqKey="Li D">D. Li</name></author><author><name sortKey="He, F" uniqKey="He F">F. He</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Du, X" uniqKey="Du X">X. Du</name></author><author><name sortKey="Cheng, J" uniqKey="Cheng J">J. Cheng</name></author><author><name sortKey="Zheng, T" uniqKey="Zheng T">T. Zheng</name></author><author><name sortKey="Duan, Z" uniqKey="Duan Z">Z. Duan</name></author><author><name sortKey="Qian, F" uniqKey="Qian F">F. Qian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zahiri, J" uniqKey="Zahiri J">J. Zahiri</name></author><author><name sortKey="Yaghoubi, O" uniqKey="Yaghoubi O">O. Yaghoubi</name></author><author><name sortKey="Mohammad Noori, M" uniqKey="Mohammad Noori M">M. Mohammad-Noori</name></author><author><name sortKey="Ebrahimpour, R" uniqKey="Ebrahimpour R">R. Ebrahimpour</name></author><author><name sortKey="Masoudi Nejad, A" uniqKey="Masoudi Nejad A">A. Masoudi-Nejad</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zahiri, J" uniqKey="Zahiri J">J. Zahiri</name></author><author><name sortKey="Mohammad Noori, M" uniqKey="Mohammad Noori M">M. Mohammad-Noori</name></author><author><name sortKey="Ebrahimpour, R" uniqKey="Ebrahimpour R">R. Ebrahimpour</name></author><author><name sortKey="Saadat, S" uniqKey="Saadat S">S. Saadat</name></author><author><name sortKey="Bozorgmehr, J H" uniqKey="Bozorgmehr J">J.H. Bozorgmehr</name></author><author><name sortKey="Goldberg, T" uniqKey="Goldberg T">T. Goldberg</name></author><author><name sortKey="Masoudi Nejad, A" uniqKey="Masoudi Nejad A">A. Masoudi-Nejad</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>République populaire de Chine</li></country><settlement><li>Pékin</li></settlement></list><tree><noCountry><name sortKey="Alghazzawi, Daniyal" sort="Alghazzawi, Daniyal" uniqKey="Alghazzawi D" first="Daniyal" last="Alghazzawi">Daniyal Alghazzawi</name><name sortKey="Wang, Yan Bin" sort="Wang, Yan Bin" uniqKey="Wang Y" first="Yan-Bin" last="Wang">Yan-Bin Wang</name></noCountry><country name="République populaire de Chine"><noRegion><name sortKey="Chen, Zhan Heng" sort="Chen, Zhan Heng" uniqKey="Chen Z" first="Zhan-Heng" last="Chen">Zhan-Heng Chen</name></noRegion><name sortKey="Cheng, Li" sort="Cheng, Li" uniqKey="Cheng L" first="Li" last="Cheng">Li Cheng</name><name sortKey="You, Zhu Hong" sort="You, Zhu Hong" uniqKey="You Z" first="Zhu-Hong" last="You">Zhu-Hong You</name><name sortKey="Zhang, Wen Bo" sort="Zhang, Wen Bo" uniqKey="Zhang W" first="Wen-Bo" last="Zhang">Wen-Bo Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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