Serveur d'exploration MERS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1

Identifieur interne : 002094 ( Istex/Corpus ); précédent : 002093; suivant : 002095

Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1

Auteurs : Alexey Bochkarev ; Jean A. Barwell ; Richard A. Pfuetzner ; William Furey Jr. ; Aled M. Edwards ; Lori Frappier

Source :

RBID : ISTEX:4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09

English descriptors

Abstract

Abstract: The crystal structure of the DNA-binding and dimerization domains of the Epstein-Barr virus nuclear antigen 1 (EBNAI), which binds to and activates DNA replication from the latent origin of replication in Epstein-Barr virus, was solved at 2.5 A resolution. EBNA1 appears to bind DNA via two independent regions termed the core and the flanking DNA-binding domains. The core DNA-binding domain, which comprises both the dimerization domain and a helix predicted to bind the inner portion of the EBNA1 DNA recognition element, was remarkably similar to the structure of the papillomavirus E2 protein, despite a complete lack of sequence conservation. The flanking DNA-binding domain, only a portion of which is contained in the current structure, consists in part of an α helix whose N-terminus contacts the outer regions of the EBNA1 DNA recognition element.

Url:
DOI: 10.1016/0092-8674(95)90232-5

Links to Exploration step

ISTEX:4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09

Le document en format XML

<record>
<TEI wicri:istexFullTextTei="biblStruct">
<teiHeader>
<fileDesc>
<titleStmt>
<title>Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
<author>
<name sortKey="Bochkarev, Alexey" sort="Bochkarev, Alexey" uniqKey="Bochkarev A" first="Alexey" last="Bochkarev">Alexey Bochkarev</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Barwell, Jean A" sort="Barwell, Jean A" uniqKey="Barwell J" first="Jean A." last="Barwell">Jean A. Barwell</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Pfuetzner, Richard A" sort="Pfuetzner, Richard A" uniqKey="Pfuetzner R" first="Richard A." last="Pfuetzner">Richard A. Pfuetzner</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Furey Jr, William" sort="Furey Jr, William" uniqKey="Furey Jr W" first="William" last="Furey Jr.">William Furey Jr.</name>
<affiliation>
<mods:affiliation>Veterans Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania 15240 USA</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Edwards, Aled M" sort="Edwards, Aled M" uniqKey="Edwards A" first="Aled M." last="Edwards">Aled M. Edwards</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
<affiliation>
<mods:affiliation>‡ These authors contributed equally to this work.</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Frappier, Lori" sort="Frappier, Lori" uniqKey="Frappier L" first="Lori" last="Frappier">Lori Frappier</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
<affiliation>
<mods:affiliation>‡ These authors contributed equally to this work.</mods:affiliation>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09</idno>
<date when="1995" year="1995">1995</date>
<idno type="doi">10.1016/0092-8674(95)90232-5</idno>
<idno type="url">https://api.istex.fr/ark:/67375/6H6-6PVV2SM3-X/fulltext.pdf</idno>
<idno type="wicri:Area/Istex/Corpus">002094</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">002094</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title level="a">Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
<author>
<name sortKey="Bochkarev, Alexey" sort="Bochkarev, Alexey" uniqKey="Bochkarev A" first="Alexey" last="Bochkarev">Alexey Bochkarev</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Barwell, Jean A" sort="Barwell, Jean A" uniqKey="Barwell J" first="Jean A." last="Barwell">Jean A. Barwell</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Pfuetzner, Richard A" sort="Pfuetzner, Richard A" uniqKey="Pfuetzner R" first="Richard A." last="Pfuetzner">Richard A. Pfuetzner</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Furey Jr, William" sort="Furey Jr, William" uniqKey="Furey Jr W" first="William" last="Furey Jr.">William Furey Jr.</name>
<affiliation>
<mods:affiliation>Veterans Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania 15240 USA</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Edwards, Aled M" sort="Edwards, Aled M" uniqKey="Edwards A" first="Aled M." last="Edwards">Aled M. Edwards</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
<affiliation>
<mods:affiliation>‡ These authors contributed equally to this work.</mods:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Frappier, Lori" sort="Frappier, Lori" uniqKey="Frappier L" first="Lori" last="Frappier">Lori Frappier</name>
<affiliation>
<mods:affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</mods:affiliation>
</affiliation>
<affiliation>
<mods:affiliation>‡ These authors contributed equally to this work.</mods:affiliation>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series>
<title level="j">Cell</title>
<title level="j" type="abbrev">CELL</title>
<idno type="ISSN">0092-8674</idno>
<imprint>
<publisher>ELSEVIER</publisher>
<date type="published" when="1995">1995</date>
<biblScope unit="volume">83</biblScope>
<biblScope unit="issue">1</biblScope>
<biblScope unit="page" from="39">39</biblScope>
<biblScope unit="page" to="46">46</biblScope>
</imprint>
<idno type="ISSN">0092-8674</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt>
<idno type="ISSN">0092-8674</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="Teeft" xml:lang="en">
<term>Ambinder</term>
<term>Amino</term>
<term>Amino acid</term>
<term>Amino acids</term>
<term>Binding sites</term>
<term>Bovine papilloma virus</term>
<term>Bovine papillomavirus</term>
<term>Cooperative binding</term>
<term>Core domain</term>
<term>Crystal structure</term>
<term>Dimer</term>
<term>Dimerization</term>
<term>Domain</term>
<term>Dyad</term>
<term>Ebnai</term>
<term>Ebnal</term>
<term>Ebnal core domain</term>
<term>Ebnal dimer</term>
<term>Ebnal dimers</term>
<term>Electron density</term>
<term>Frappier</term>
<term>Hayward</term>
<term>Helix</term>
<term>Homology</term>
<term>Latent infection</term>
<term>Local dyad axis</term>
<term>Monomer</term>
<term>Nuclear antigen</term>
<term>Orip</term>
<term>Papillomavirus</term>
<term>Pcmb</term>
<term>Proline</term>
<term>Proline loop</term>
<term>Recognition element</term>
<term>Recognition helix</term>
<term>Replication</term>
<term>Residue</term>
<term>Side chains</term>
<term>Structural homology</term>
<term>Sugden</term>
<term>Viral</term>
<term>Virol</term>
</keywords>
</textClass>
<langUsage>
<language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Abstract: The crystal structure of the DNA-binding and dimerization domains of the Epstein-Barr virus nuclear antigen 1 (EBNAI), which binds to and activates DNA replication from the latent origin of replication in Epstein-Barr virus, was solved at 2.5 A resolution. EBNA1 appears to bind DNA via two independent regions termed the core and the flanking DNA-binding domains. The core DNA-binding domain, which comprises both the dimerization domain and a helix predicted to bind the inner portion of the EBNA1 DNA recognition element, was remarkably similar to the structure of the papillomavirus E2 protein, despite a complete lack of sequence conservation. The flanking DNA-binding domain, only a portion of which is contained in the current structure, consists in part of an α helix whose N-terminus contacts the outer regions of the EBNA1 DNA recognition element.</div>
</front>
</TEI>
<istex>
<corpusName>elsevier</corpusName>
<keywords>
<teeft>
<json:string>ebnal</json:string>
<json:string>helix</json:string>
<json:string>ebnai</json:string>
<json:string>dimer</json:string>
<json:string>replication</json:string>
<json:string>viral</json:string>
<json:string>frappier</json:string>
<json:string>dimerization</json:string>
<json:string>virol</json:string>
<json:string>core domain</json:string>
<json:string>homology</json:string>
<json:string>recognition helix</json:string>
<json:string>sugden</json:string>
<json:string>amino acids</json:string>
<json:string>ambinder</json:string>
<json:string>dyad</json:string>
<json:string>proline</json:string>
<json:string>papillomavirus</json:string>
<json:string>pcmb</json:string>
<json:string>orip</json:string>
<json:string>amino</json:string>
<json:string>ebnal core domain</json:string>
<json:string>proline loop</json:string>
<json:string>monomer</json:string>
<json:string>hayward</json:string>
<json:string>amino acid</json:string>
<json:string>bovine papillomavirus</json:string>
<json:string>crystal structure</json:string>
<json:string>latent infection</json:string>
<json:string>recognition element</json:string>
<json:string>ebnal dimer</json:string>
<json:string>cooperative binding</json:string>
<json:string>structural homology</json:string>
<json:string>side chains</json:string>
<json:string>domain</json:string>
<json:string>electron density</json:string>
<json:string>bovine papilloma virus</json:string>
<json:string>binding sites</json:string>
<json:string>ebnal dimers</json:string>
<json:string>nuclear antigen</json:string>
<json:string>local dyad axis</json:string>
<json:string>residue</json:string>
<json:string>binding site</json:string>
<json:string>structural similarity</json:string>
<json:string>noncrystallographic axis</json:string>
<json:string>hydrogen bonds</json:string>
<json:string>other monomer</json:string>
<json:string>fusion protein</json:string>
<json:string>recognition helices</json:string>
<json:string>cell cycle</json:string>
<json:string>dimerization domains</json:string>
<json:string>other proteins</json:string>
<json:string>ebnal proline loop</json:string>
<json:string>distinct domains</json:string>
<json:string>core region</json:string>
<json:string>ebnal activates</json:string>
<json:string>dimerization domain</json:string>
<json:string>inner portion</json:string>
<json:string>carbon backbones</json:string>
<json:string>base pairs</json:string>
<json:string>epsteinbarr virus</json:string>
<json:string>viral polypeptides</json:string>
<json:string>viral protein</json:string>
<json:string>ebnal function</json:string>
<json:string>reservoir solution</json:string>
<json:string>space group</json:string>
<json:string>pcmb data</json:string>
<json:string>diffraction data</json:string>
<json:string>ebnai core</json:string>
<json:string>least squares</json:string>
<json:string>water molecules</json:string>
<json:string>refined model</json:string>
<json:string>sequence conservation</json:string>
<json:string>sequence requirements</json:string>
<json:string>replication origin</json:string>
<json:string>raven press</json:string>
<json:string>human cells</json:string>
<json:string>bovine</json:string>
</teeft>
</keywords>
<author>
<json:item>
<name>Alexey Bochkarev</name>
<affiliations>
<json:string>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</json:string>
</affiliations>
</json:item>
<json:item>
<name>Jean A. Barwell</name>
<affiliations>
<json:string>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</json:string>
</affiliations>
</json:item>
<json:item>
<name>Richard A. Pfuetzner</name>
<affiliations>
<json:string>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</json:string>
</affiliations>
</json:item>
<json:item>
<name>William Furey, Jr.</name>
<affiliations>
<json:string>Veterans Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania 15240 USA</json:string>
</affiliations>
</json:item>
<json:item>
<name>Aled M. Edwards</name>
<affiliations>
<json:string>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</json:string>
<json:string>‡ These authors contributed equally to this work.</json:string>
</affiliations>
</json:item>
<json:item>
<name>Lori Frappier</name>
<affiliations>
<json:string>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</json:string>
<json:string>‡ These authors contributed equally to this work.</json:string>
</affiliations>
</json:item>
</author>
<arkIstex>ark:/67375/6H6-6PVV2SM3-X</arkIstex>
<language>
<json:string>eng</json:string>
</language>
<originalGenre>
<json:string>Full-length article</json:string>
</originalGenre>
<abstract>Abstract: The crystal structure of the DNA-binding and dimerization domains of the Epstein-Barr virus nuclear antigen 1 (EBNAI), which binds to and activates DNA replication from the latent origin of replication in Epstein-Barr virus, was solved at 2.5 A resolution. EBNA1 appears to bind DNA via two independent regions termed the core and the flanking DNA-binding domains. The core DNA-binding domain, which comprises both the dimerization domain and a helix predicted to bind the inner portion of the EBNA1 DNA recognition element, was remarkably similar to the structure of the papillomavirus E2 protein, despite a complete lack of sequence conservation. The flanking DNA-binding domain, only a portion of which is contained in the current structure, consists in part of an α helix whose N-terminus contacts the outer regions of the EBNA1 DNA recognition element.</abstract>
<qualityIndicators>
<score>8.608</score>
<pdfWordCount>6106</pdfWordCount>
<pdfCharCount>36808</pdfCharCount>
<pdfVersion>1.3</pdfVersion>
<pdfPageCount>8</pdfPageCount>
<pdfPageSize>612 x 792 pts (letter)</pdfPageSize>
<refBibsNative>true</refBibsNative>
<abstractWordCount>134</abstractWordCount>
<abstractCharCount>867</abstractCharCount>
<keywordCount>0</keywordCount>
</qualityIndicators>
<title>Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
<pmid>
<json:string>7553871</json:string>
</pmid>
<pii>
<json:string>0092-8674(95)90232-5</json:string>
</pii>
<genre>
<json:string>research-article</json:string>
</genre>
<serie>
<title>Proc. Natl. Acad. Sci. USA</title>
<language>
<json:string>unknown</json:string>
</language>
<volume>88</volume>
<pages>
<first>10875</first>
<last>10879</last>
</pages>
</serie>
<host>
<title>Cell</title>
<language>
<json:string>unknown</json:string>
</language>
<publicationDate>1995</publicationDate>
<issn>
<json:string>0092-8674</json:string>
</issn>
<pii>
<json:string>S0092-8674(00)X0437-0</json:string>
</pii>
<volume>83</volume>
<issue>1</issue>
<pages>
<first>39</first>
<last>46</last>
</pages>
<genre>
<json:string>journal</json:string>
</genre>
</host>
<namedEntities>
<unitex>
<date>
<json:string>8834</json:string>
<json:string>1995</json:string>
</date>
<geogName></geogName>
<orgName>
<json:string>National Cancer Institute of Canada</json:string>
<json:string>Medical Research Council of Canada</json:string>
<json:string>Howard Hughes Medical Institute and Department of Molecular Biophysics and Biochemistry</json:string>
<json:string>NCI</json:string>
<json:string>Research Scholar of the MRC</json:string>
<json:string>Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania</json:string>
<json:string>Research Scientist of the NCI</json:string>
<json:string>MRC</json:string>
<json:string>Yale University</json:string>
</orgName>
<orgName_funder></orgName_funder>
<orgName_provider></orgName_provider>
<persName>
<json:string>Lori Frappier</json:string>
<json:string>J. Rim</json:string>
<json:string>R. Read</json:string>
<json:string>A. Zdanov</json:string>
<json:string>A. T. Briinger</json:string>
<json:string>D. Yang</json:string>
<json:string>William Furey</json:string>
<json:string>Z. Otwinowski</json:string>
<json:string>C. Arrowsmith</json:string>
<json:string>Aled M. Edwards</json:string>
<json:string>J. Rini</json:string>
<json:string>S. Darst</json:string>
<json:string>Richard A. Pfuetzner</json:string>
<json:string>D. Chasman</json:string>
<json:string>F. Sicheri</json:string>
<json:string>J. Pflugrath</json:string>
<json:string>Jean A. Barwell</json:string>
<json:string>Hayward</json:string>
</persName>
<placeName>
<json:string>Madison</json:string>
<json:string>CT</json:string>
<json:string>WI</json:string>
<json:string>New Haven</json:string>
</placeName>
<ref_url></ref_url>
<ref_bibl>
<json:string>Mohr et al., 1990</json:string>
<json:string>Hendrickson and Konnert, 19801</json:string>
<json:string>Chen et al., 1994</json:string>
<json:string>Miller, 1990</json:string>
<json:string>Frappier and O ’ Donnell, 1991</json:string>
<json:string>Yang et al., 1991</json:string>
<json:string>Studier et al., 1990</json:string>
<json:string>Yates et al., 1985</json:string>
<json:string>Ustav et al., 1991</json:string>
<json:string>Chen et al., 1993</json:string>
<json:string>Harrison et al., 1994</json:string>
<json:string>Muchardt and Yaniv, 1993</json:string>
<json:string>Adams, 1987</json:string>
<json:string>Reisman et al., 1985</json:string>
<json:string>Lupton and Levine, 1985</json:string>
<json:string>Giri and Yaniv, 1988</json:string>
<json:string>Hearing et al., 1992</json:string>
<json:string>Rawlins et al., 1985</json:string>
<json:string>Reisman and Sugden, 1986</json:string>
<json:string>Barwell et al., 1995</json:string>
<json:string>Krysan et al., 1989</json:string>
<json:string>Ustav and Stenlund, 1991</json:string>
<json:string>Hsieh et al., 1993</json:string>
<json:string>Friedman et al., 1995</json:string>
<json:string>Goldsmith et al., 1993</json:string>
<json:string>Furey and Swaminathan, 1995</json:string>
<json:string>Steger et al., 1995</json:string>
<json:string>Furey et al., 1982</json:string>
<json:string>Frappier et al., 1994</json:string>
<json:string>Yates and Guan, 1991</json:string>
<json:string>Ambinder et al., 1991</json:string>
<json:string>Roizmann and Sears, 1990</json:string>
<json:string>Sugden and Warren, 1989</json:string>
<json:string>reviewed by Klein, 1989</json:string>
<json:string>Yang et al., 1993</json:string>
<json:string>Summers et al.</json:string>
<json:string>Seo et al., 1993</json:string>
<json:string>Hegde et al., 1992</json:string>
<json:string>Jones et al., 1991</json:string>
<json:string>Prakash et al., 1992</json:string>
<json:string>Ambinder et al., 1990</json:string>
<json:string>Frappier and O ’ Donnell, 1992</json:string>
<json:string>Bonne-Andrea et al., 1995</json:string>
</ref_bibl>
<bibl></bibl>
</unitex>
</namedEntities>
<ark>
<json:string>ark:/67375/6H6-6PVV2SM3-X</json:string>
</ark>
<categories>
<wos>
<json:string>1 - science</json:string>
<json:string>2 - cell biology</json:string>
<json:string>2 - biochemistry & molecular biology</json:string>
</wos>
<scienceMetrix>
<json:string>1 - health sciences</json:string>
<json:string>2 - biomedical research</json:string>
<json:string>3 - developmental biology</json:string>
</scienceMetrix>
<scopus>
<json:string>1 - Life Sciences</json:string>
<json:string>2 - Biochemistry, Genetics and Molecular Biology</json:string>
<json:string>3 - General Biochemistry, Genetics and Molecular Biology</json:string>
</scopus>
<inist>
<json:string>1 - sciences appliquees, technologies et medecines</json:string>
<json:string>2 - sciences biologiques et medicales</json:string>
<json:string>3 - sciences biologiques fondamentales et appliquees. psychologie</json:string>
</inist>
</categories>
<publicationDate>1995</publicationDate>
<copyrightDate>1995</copyrightDate>
<doi>
<json:string>10.1016/0092-8674(95)90232-5</json:string>
</doi>
<id>4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09</id>
<score>1</score>
<fulltext>
<json:item>
<extension>pdf</extension>
<original>true</original>
<mimetype>application/pdf</mimetype>
<uri>https://api.istex.fr/ark:/67375/6H6-6PVV2SM3-X/fulltext.pdf</uri>
</json:item>
<json:item>
<extension>zip</extension>
<original>false</original>
<mimetype>application/zip</mimetype>
<uri>https://api.istex.fr/ark:/67375/6H6-6PVV2SM3-X/bundle.zip</uri>
</json:item>
<istex:fulltextTEI uri="https://api.istex.fr/ark:/67375/6H6-6PVV2SM3-X/fulltext.tei">
<teiHeader>
<fileDesc>
<titleStmt>
<title level="a">Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
</titleStmt>
<publicationStmt>
<authority>ISTEX</authority>
<publisher scheme="https://scientific-publisher.data.istex.fr">ELSEVIER</publisher>
<availability>
<licence>
<p>elsevier</p>
</licence>
</availability>
<p scheme="https://loaded-corpus.data.istex.fr/ark:/67375/XBH-HKKZVM7B-M"></p>
<date>1995</date>
</publicationStmt>
<notesStmt>
<note type="research-article" scheme="https://content-type.data.istex.fr/ark:/67375/XTP-1JC4F85T-7">research-article</note>
<note type="journal" scheme="https://publication-type.data.istex.fr/ark:/67375/JMC-0GLKJH51-B">journal</note>
<note type="content">Section title: Article</note>
</notesStmt>
<sourceDesc>
<biblStruct type="inbook">
<analytic>
<title level="a">Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
<author xml:id="author-0000">
<persName>
<forename type="first">Alexey</forename>
<surname>Bochkarev</surname>
</persName>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
</author>
<author xml:id="author-0001">
<persName>
<forename type="first">Jean A.</forename>
<surname>Barwell</surname>
</persName>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
</author>
<author xml:id="author-0002">
<persName>
<forename type="first">Richard A.</forename>
<surname>Pfuetzner</surname>
</persName>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
</author>
<author xml:id="author-0003">
<persName>
<forename type="first">William</forename>
<surname>Furey, Jr.</surname>
</persName>
<affiliation>Veterans Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania 15240 USA</affiliation>
</author>
<author xml:id="author-0004">
<persName>
<forename type="first">Aled M.</forename>
<surname>Edwards</surname>
</persName>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<affiliation>‡ These authors contributed equally to this work.</affiliation>
</author>
<author xml:id="author-0005">
<persName>
<forename type="first">Lori</forename>
<surname>Frappier</surname>
</persName>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<affiliation>‡ These authors contributed equally to this work.</affiliation>
</author>
<idno type="istex">4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09</idno>
<idno type="ark">ark:/67375/6H6-6PVV2SM3-X</idno>
<idno type="DOI">10.1016/0092-8674(95)90232-5</idno>
<idno type="PII">0092-8674(95)90232-5</idno>
</analytic>
<monogr>
<title level="j">Cell</title>
<title level="j" type="abbrev">CELL</title>
<idno type="pISSN">0092-8674</idno>
<idno type="PII">S0092-8674(00)X0437-0</idno>
<imprint>
<publisher>ELSEVIER</publisher>
<date type="published" when="1995"></date>
<biblScope unit="volume">83</biblScope>
<biblScope unit="issue">1</biblScope>
<biblScope unit="page" from="39">39</biblScope>
<biblScope unit="page" to="46">46</biblScope>
</imprint>
</monogr>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<creation>
<date>1995</date>
</creation>
<langUsage>
<language ident="en">en</language>
</langUsage>
<abstract xml:lang="en">
<p>Abstract: The crystal structure of the DNA-binding and dimerization domains of the Epstein-Barr virus nuclear antigen 1 (EBNAI), which binds to and activates DNA replication from the latent origin of replication in Epstein-Barr virus, was solved at 2.5 A resolution. EBNA1 appears to bind DNA via two independent regions termed the core and the flanking DNA-binding domains. The core DNA-binding domain, which comprises both the dimerization domain and a helix predicted to bind the inner portion of the EBNA1 DNA recognition element, was remarkably similar to the structure of the papillomavirus E2 protein, despite a complete lack of sequence conservation. The flanking DNA-binding domain, only a portion of which is contained in the current structure, consists in part of an α helix whose N-terminus contacts the outer regions of the EBNA1 DNA recognition element.</p>
</abstract>
</profileDesc>
<revisionDesc>
<change when="1995-08-17">Modified</change>
<change when="1995">Published</change>
</revisionDesc>
</teiHeader>
</istex:fulltextTEI>
<json:item>
<extension>txt</extension>
<original>false</original>
<mimetype>text/plain</mimetype>
<uri>https://api.istex.fr/ark:/67375/6H6-6PVV2SM3-X/fulltext.txt</uri>
</json:item>
</fulltext>
<metadata>
<istex:metadataXml wicri:clean="Elsevier, elements deleted: tail">
<istex:xmlDeclaration>version="1.0" encoding="utf-8"</istex:xmlDeclaration>
<istex:docType PUBLIC="-//ES//DTD journal article DTD version 4.5.2//EN//XML" URI="art452.dtd" name="istex:docType"></istex:docType>
<istex:document>
<converted-article version="4.5.2" docsubtype="fla">
<item-info>
<jid>CELL</jid>
<aid>95902325</aid>
<ce:pii>0092-8674(95)90232-5</ce:pii>
<ce:doi>10.1016/0092-8674(95)90232-5</ce:doi>
<ce:copyright type="unknown" year="1995"></ce:copyright>
</item-info>
<head>
<ce:dochead>
<ce:textfn>Article</ce:textfn>
</ce:dochead>
<ce:title>Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</ce:title>
<ce:author-group>
<ce:author>
<ce:given-name>Alexey</ce:given-name>
<ce:surname>Bochkarev</ce:surname>
<ce:cross-ref refid="AFF1">
<ce:sup></ce:sup>
</ce:cross-ref>
</ce:author>
<ce:author>
<ce:given-name>Jean A.</ce:given-name>
<ce:surname>Barwell</ce:surname>
<ce:cross-ref refid="AFF1">
<ce:sup></ce:sup>
</ce:cross-ref>
</ce:author>
<ce:author>
<ce:given-name>Richard A.</ce:given-name>
<ce:surname>Pfuetzner</ce:surname>
<ce:cross-ref refid="AFF1">
<ce:sup></ce:sup>
</ce:cross-ref>
</ce:author>
<ce:author>
<ce:given-name>William</ce:given-name>
<ce:surname>Furey</ce:surname>
<ce:suffix>Jr.</ce:suffix>
<ce:cross-ref refid="AFF2">
<ce:sup></ce:sup>
</ce:cross-ref>
</ce:author>
<ce:author>
<ce:given-name>Aled M.</ce:given-name>
<ce:surname>Edwards</ce:surname>
<ce:cross-ref refid="AFF1">
<ce:sup></ce:sup>
</ce:cross-ref>
<ce:cross-ref refid="FN1">
<ce:sup></ce:sup>
</ce:cross-ref>
</ce:author>
<ce:author>
<ce:given-name>Lori</ce:given-name>
<ce:surname>Frappier</ce:surname>
<ce:cross-ref refid="AFF1">
<ce:sup></ce:sup>
</ce:cross-ref>
<ce:cross-ref refid="FN1">
<ce:sup></ce:sup>
</ce:cross-ref>
</ce:author>
<ce:affiliation id="AFF1">
<ce:label></ce:label>
<ce:textfn>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</ce:textfn>
</ce:affiliation>
<ce:affiliation id="AFF2">
<ce:label></ce:label>
<ce:textfn>Veterans Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania 15240 USA</ce:textfn>
</ce:affiliation>
<ce:footnote id="FN1">
<ce:label></ce:label>
<ce:note-para>These authors contributed equally to this work.</ce:note-para>
</ce:footnote>
</ce:author-group>
<ce:date-received day="13" month="7" year="1995"></ce:date-received>
<ce:date-revised day="17" month="8" year="1995"></ce:date-revised>
<ce:abstract>
<ce:section-title>Abstract</ce:section-title>
<ce:abstract-sec>
<ce:simple-para>The crystal structure of the DNA-binding and dimerization domains of the Epstein-Barr virus nuclear antigen 1 (EBNAI), which binds to and activates DNA replication from the latent origin of replication in Epstein-Barr virus, was solved at 2.5 A resolution. EBNA1 appears to bind DNA via two independent regions termed the core and the flanking DNA-binding domains. The core DNA-binding domain, which comprises both the dimerization domain and a helix predicted to bind the inner portion of the EBNA1 DNA recognition element, was remarkably similar to the structure of the papillomavirus E2 protein, despite a complete lack of sequence conservation. The flanking DNA-binding domain, only a portion of which is contained in the current structure, consists in part of an α helix whose N-terminus contacts the outer regions of the EBNA1 DNA recognition element.</ce:simple-para>
</ce:abstract-sec>
</ce:abstract>
</head>
</converted-article>
</istex:document>
</istex:metadataXml>
<mods version="3.6">
<titleInfo>
<title>Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
</titleInfo>
<titleInfo type="alternative" contentType="CDATA">
<title>Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1</title>
</titleInfo>
<name type="personal">
<namePart type="given">Alexey</namePart>
<namePart type="family">Bochkarev</namePart>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Jean A.</namePart>
<namePart type="family">Barwell</namePart>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Richard A.</namePart>
<namePart type="family">Pfuetzner</namePart>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">William</namePart>
<namePart type="family">Furey, Jr.</namePart>
<affiliation>Veterans Administration Medical Center Biocrystallography Laboratory and Department of Crystallography University of Pittsburgh Pittsburgh, Pennsylvania 15240 USA</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Aled M.</namePart>
<namePart type="family">Edwards</namePart>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<affiliation>‡ These authors contributed equally to this work.</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Lori</namePart>
<namePart type="family">Frappier</namePart>
<affiliation>Institute for Molecular Biology and Biotechnology Cancer Research Group Department of Pathology McMaster University Hamilton, Ontario, Canada L8N 3Z5</affiliation>
<affiliation>‡ These authors contributed equally to this work.</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<typeOfResource>text</typeOfResource>
<genre type="research-article" displayLabel="Full-length article" authority="ISTEX" authorityURI="https://content-type.data.istex.fr" valueURI="https://content-type.data.istex.fr/ark:/67375/XTP-1JC4F85T-7">research-article</genre>
<originInfo>
<publisher>ELSEVIER</publisher>
<dateIssued encoding="w3cdtf">1995</dateIssued>
<dateModified encoding="w3cdtf">1995-08-17</dateModified>
<copyrightDate encoding="w3cdtf">1995</copyrightDate>
</originInfo>
<language>
<languageTerm type="code" authority="iso639-2b">eng</languageTerm>
<languageTerm type="code" authority="rfc3066">en</languageTerm>
</language>
<abstract lang="en">Abstract: The crystal structure of the DNA-binding and dimerization domains of the Epstein-Barr virus nuclear antigen 1 (EBNAI), which binds to and activates DNA replication from the latent origin of replication in Epstein-Barr virus, was solved at 2.5 A resolution. EBNA1 appears to bind DNA via two independent regions termed the core and the flanking DNA-binding domains. The core DNA-binding domain, which comprises both the dimerization domain and a helix predicted to bind the inner portion of the EBNA1 DNA recognition element, was remarkably similar to the structure of the papillomavirus E2 protein, despite a complete lack of sequence conservation. The flanking DNA-binding domain, only a portion of which is contained in the current structure, consists in part of an α helix whose N-terminus contacts the outer regions of the EBNA1 DNA recognition element.</abstract>
<note type="content">Section title: Article</note>
<relatedItem type="host">
<titleInfo>
<title>Cell</title>
</titleInfo>
<titleInfo type="abbreviated">
<title>CELL</title>
</titleInfo>
<genre type="journal" authority="ISTEX" authorityURI="https://publication-type.data.istex.fr" valueURI="https://publication-type.data.istex.fr/ark:/67375/JMC-0GLKJH51-B">journal</genre>
<originInfo>
<publisher>ELSEVIER</publisher>
<dateIssued encoding="w3cdtf">1995</dateIssued>
</originInfo>
<identifier type="ISSN">0092-8674</identifier>
<identifier type="PII">S0092-8674(00)X0437-0</identifier>
<part>
<date>1995</date>
<detail type="volume">
<number>83</number>
<caption>vol.</caption>
</detail>
<detail type="issue">
<number>1</number>
<caption>no.</caption>
</detail>
<extent unit="issue-pages">
<start>1</start>
<end>155</end>
</extent>
<extent unit="pages">
<start>39</start>
<end>46</end>
</extent>
</part>
</relatedItem>
<identifier type="istex">4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09</identifier>
<identifier type="ark">ark:/67375/6H6-6PVV2SM3-X</identifier>
<identifier type="DOI">10.1016/0092-8674(95)90232-5</identifier>
<identifier type="PII">0092-8674(95)90232-5</identifier>
<recordInfo>
<recordContentSource authority="ISTEX" authorityURI="https://loaded-corpus.data.istex.fr" valueURI="https://loaded-corpus.data.istex.fr/ark:/67375/XBH-HKKZVM7B-M">elsevier</recordContentSource>
</recordInfo>
</mods>
<json:item>
<extension>json</extension>
<original>false</original>
<mimetype>application/json</mimetype>
<uri>https://api.istex.fr/ark:/67375/6H6-6PVV2SM3-X/record.json</uri>
</json:item>
</metadata>
</istex>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Istex/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002094 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Istex/Corpus/biblio.hfd -nk 002094 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    MersV1
   |flux=    Istex
   |étape=   Corpus
   |type=    RBID
   |clé=     ISTEX:4CF9DDD9CD8B61733A7B04D6B8B0523FDDAB2E09
   |texte=   Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA1
}}

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Mon Apr 20 23:26:43 2020. Site generation: Sat Mar 27 09:06:09 2021