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Characterization of Uncultivable Bat Influenza Virus Using a Replicative Synthetic Virus

Identifieur interne : 000C16 ( Pmc/Curation ); précédent : 000C15; suivant : 000C17

Characterization of Uncultivable Bat Influenza Virus Using a Replicative Synthetic Virus

Auteurs : Bin Zhou [États-Unis] ; Jingjiao Ma [États-Unis] ; Qinfang Liu [États-Unis] ; Bhupinder Bawa [États-Unis] ; Wei Wang [États-Unis] ; Reed S. Shabman [États-Unis] ; Michael Duff [États-Unis] ; Jinhwa Lee [États-Unis] ; Yuekun Lang [États-Unis] ; Nan Cao [États-Unis] ; Abdou Nagy [États-Unis] ; Xudong Lin [États-Unis] ; Timothy B. Stockwell [États-Unis] ; Juergen A. Richt [États-Unis] ; David E. Wentworth [États-Unis] ; Wenjun Ma [États-Unis]

Source :

RBID : PMC:4183581

Abstract

Bats harbor many viruses, which are periodically transmitted to humans resulting in outbreaks of disease (e.g., Ebola, SARS-CoV). Recently, influenza virus-like sequences were identified in bats; however, the viruses could not be cultured. This discovery aroused great interest in understanding the evolutionary history and pandemic potential of bat-influenza. Using synthetic genomics, we were unable to rescue the wild type bat virus, but could rescue a modified bat-influenza virus that had the HA and NA coding regions replaced with those of A/PR/8/1934 (H1N1). This modified bat-influenza virus replicated efficiently in vitro and in mice, resulting in severe disease. Additional studies using a bat-influenza virus that had the HA and NA of A/swine/Texas/4199-2/1998 (H3N2) showed that the PR8 HA and NA contributed to the pathogenicity in mice. Unlike other influenza viruses, engineering truncations hypothesized to reduce interferon antagonism into the NS1 protein didn't attenuate bat-influenza. In contrast, substitution of a putative virulence mutation from the bat-influenza PB2 significantly attenuated the virus in mice and introduction of a putative virulence mutation increased its pathogenicity. Mini-genome replication studies and virus reassortment experiments demonstrated that bat-influenza has very limited genetic and protein compatibility with Type A or Type B influenza viruses, yet it readily reassorts with another divergent bat-influenza virus, suggesting that the bat-influenza lineage may represent a new Genus/Species within the Orthomyxoviridae family. Collectively, our data indicate that the bat-influenza viruses recently identified are authentic viruses that pose little, if any, pandemic threat to humans; however, they provide new insights into the evolution and basic biology of influenza viruses.


Url:
DOI: 10.1371/journal.ppat.1004420
PubMed: 25275541
PubMed Central: 4183581

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PMC:4183581

Le document en format XML

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<p>Bats harbor many viruses, which are periodically transmitted to humans resulting in outbreaks of disease (e.g., Ebola, SARS-CoV). Recently, influenza virus-like sequences were identified in bats; however, the viruses could not be cultured. This discovery aroused great interest in understanding the evolutionary history and pandemic potential of bat-influenza. Using synthetic genomics, we were unable to rescue the wild type bat virus, but could rescue a modified bat-influenza virus that had the HA and NA coding regions replaced with those of A/PR/8/1934 (H1N1). This modified bat-influenza virus replicated efficiently
<italic>in vitro</italic>
and in mice, resulting in severe disease. Additional studies using a bat-influenza virus that had the HA and NA of A/swine/Texas/4199-2/1998 (H3N2) showed that the PR8 HA and NA contributed to the pathogenicity in mice. Unlike other influenza viruses, engineering truncations hypothesized to reduce interferon antagonism into the NS1 protein didn't attenuate bat-influenza. In contrast, substitution of a putative virulence mutation from the bat-influenza PB2 significantly attenuated the virus in mice and introduction of a putative virulence mutation increased its pathogenicity. Mini-genome replication studies and virus reassortment experiments demonstrated that bat-influenza has very limited genetic and protein compatibility with Type A or Type B influenza viruses, yet it readily reassorts with another divergent bat-influenza virus, suggesting that the bat-influenza lineage may represent a new Genus/Species within the
<italic>Orthomyxoviridae</italic>
family. Collectively, our data indicate that the bat-influenza viruses recently identified are authentic viruses that pose little, if any, pandemic threat to humans; however, they provide new insights into the evolution and basic biology of influenza viruses.</p>
</div>
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<pmc-dir>properties open_access</pmc-dir>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">PLoS Pathog</journal-id>
<journal-id journal-id-type="iso-abbrev">PLoS Pathog</journal-id>
<journal-id journal-id-type="publisher-id">plos</journal-id>
<journal-id journal-id-type="pmc">plospath</journal-id>
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<journal-title>PLoS Pathogens</journal-title>
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<issn pub-type="ppub">1553-7366</issn>
<issn pub-type="epub">1553-7374</issn>
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<publisher-name>Public Library of Science</publisher-name>
<publisher-loc>San Francisco, USA</publisher-loc>
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</journal-meta>
<article-meta>
<article-id pub-id-type="pmid">25275541</article-id>
<article-id pub-id-type="pmc">4183581</article-id>
<article-id pub-id-type="publisher-id">PPATHOGENS-D-14-00861</article-id>
<article-id pub-id-type="doi">10.1371/journal.ppat.1004420</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Research Article</subject>
</subj-group>
<subj-group subj-group-type="Discipline-v2">
<subject>Biology and Life Sciences</subject>
<subj-group>
<subject>Evolutionary Biology</subject>
</subj-group>
<subj-group>
<subject>Genetics</subject>
</subj-group>
<subj-group>
<subject>Microbiology</subject>
</subj-group>
<subj-group>
<subject>Molecular Biology</subject>
</subj-group>
<subj-group>
<subject>Synthetic Biology</subject>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v2">
<subject>Medicine and Health Sciences</subject>
<subj-group>
<subject>Infectious Diseases</subject>
</subj-group>
<subj-group>
<subject>Pathology and Laboratory Medicine</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Characterization of Uncultivable Bat Influenza Virus Using a Replicative Synthetic Virus</article-title>
<alt-title alt-title-type="running-head">Synthetic Bat-Influenza Virus Is Infectious</alt-title>
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<contrib-group>
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<given-names>Bin</given-names>
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<xref ref-type="aff" rid="aff1">
<sup>1</sup>
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<surname>Liu</surname>
<given-names>Qinfang</given-names>
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</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shabman</surname>
<given-names>Reed S.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Duff</surname>
<given-names>Michael</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Lee</surname>
<given-names>Jinhwa</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Lang</surname>
<given-names>Yuekun</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Cao</surname>
<given-names>Nan</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Nagy</surname>
<given-names>Abdou</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Lin</surname>
<given-names>Xudong</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Stockwell</surname>
<given-names>Timothy B.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Richt</surname>
<given-names>Juergen A.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wentworth</surname>
<given-names>David E.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="cor1">
<sup>*</sup>
</xref>
<xref ref-type="author-notes" rid="fn2">
<sup>¤b</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ma</surname>
<given-names>Wenjun</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="cor1">
<sup>*</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<label>1</label>
<addr-line>Virology, J. Craig Venter Institute, Rockville, Maryland, United States of America</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, United States of America</addr-line>
</aff>
<contrib-group>
<contrib contrib-type="editor">
<name>
<surname>Thiel</surname>
<given-names>Volker</given-names>
</name>
<role>Editor</role>
<xref ref-type="aff" rid="edit1"></xref>
</contrib>
</contrib-group>
<aff id="edit1">
<addr-line>University of Berne, Switzerland</addr-line>
</aff>
<author-notes>
<corresp id="cor1">* E-mail:
<email>dwentworth@cdc.gov</email>
(DEW);
<email>wma@vet.k-state.edu</email>
(WM)</corresp>
<fn fn-type="COI-statement">
<p>The authors have declared that no competing interests exist.</p>
</fn>
<fn fn-type="con">
<p>Conceived and designed the experiments: BZ JM QL DEW WM. Performed the experiments: BZ JM QL BB WW MD JL YL NC AN XL DEW WM. Analyzed the data: BZ JM QL WW BB RSS TBS DEW WM. Contributed reagents/materials/analysis tools: BZ JM QL WW BB RSS DEW WM. Contributed to the writing of the manuscript: BZ JM QL JAR DEW WM.</p>
</fn>
<fn id="fn1" fn-type="current-aff">
<label>¤a</label>
<p>Current address: Department of Biology, New York University, New York, New York, United States of America</p>
</fn>
<fn id="fn2" fn-type="current-aff">
<label>¤b</label>
<p>Current address: Influenza Division, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America</p>
</fn>
</author-notes>
<pub-date pub-type="collection">
<month>10</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="epub">
<day>2</day>
<month>10</month>
<year>2014</year>
</pub-date>
<volume>10</volume>
<issue>10</issue>
<elocation-id>e1004420</elocation-id>
<history>
<date date-type="received">
<day>10</day>
<month>4</month>
<year>2014</year>
</date>
<date date-type="accepted">
<day>24</day>
<month>8</month>
<year>2014</year>
</date>
</history>
<permissions>
<copyright-statement>© 2014 Zhou et al</copyright-statement>
<copyright-year>2014</copyright-year>
<copyright-holder>Zhou et al</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.</license-p>
</license>
</permissions>
<abstract>
<p>Bats harbor many viruses, which are periodically transmitted to humans resulting in outbreaks of disease (e.g., Ebola, SARS-CoV). Recently, influenza virus-like sequences were identified in bats; however, the viruses could not be cultured. This discovery aroused great interest in understanding the evolutionary history and pandemic potential of bat-influenza. Using synthetic genomics, we were unable to rescue the wild type bat virus, but could rescue a modified bat-influenza virus that had the HA and NA coding regions replaced with those of A/PR/8/1934 (H1N1). This modified bat-influenza virus replicated efficiently
<italic>in vitro</italic>
and in mice, resulting in severe disease. Additional studies using a bat-influenza virus that had the HA and NA of A/swine/Texas/4199-2/1998 (H3N2) showed that the PR8 HA and NA contributed to the pathogenicity in mice. Unlike other influenza viruses, engineering truncations hypothesized to reduce interferon antagonism into the NS1 protein didn't attenuate bat-influenza. In contrast, substitution of a putative virulence mutation from the bat-influenza PB2 significantly attenuated the virus in mice and introduction of a putative virulence mutation increased its pathogenicity. Mini-genome replication studies and virus reassortment experiments demonstrated that bat-influenza has very limited genetic and protein compatibility with Type A or Type B influenza viruses, yet it readily reassorts with another divergent bat-influenza virus, suggesting that the bat-influenza lineage may represent a new Genus/Species within the
<italic>Orthomyxoviridae</italic>
family. Collectively, our data indicate that the bat-influenza viruses recently identified are authentic viruses that pose little, if any, pandemic threat to humans; however, they provide new insights into the evolution and basic biology of influenza viruses.</p>
</abstract>
<abstract abstract-type="summary">
<title>Author Summary</title>
<p>The identification of influenza virus-like sequences in two different bat species has generated great interest in understanding their biology, ability to mix with other influenza viruses, and their public health threat. Unfortunately, bat-influenza viruses couldn't be cultured from the samples containing the influenza-like nucleic acids. We used synthetic genomics strategies to create wild type bat-influenza, or bat-influenza modified by substituting the surface glycoproteins with those of model influenza A viruses. Although influenza virus-like particles were produced from both synthetic genomes, only the modified bat-influenza viruses could be cultured. The modified bat-influenza viruses replicated efficiently
<italic>in vitro</italic>
and an H1N1 modified version caused severe disease in mice. Collectively our data show: (1) the two bat-flu genomes identified in other studies are replication competent, suggesting that host cell specificity is the major limitation for propagation of bat-influenza, (2) bat-influenza NS1 antagonizes host interferon response more efficiently than that of a model influenza A virus, (3) bat-influenza has both genetic and protein incompatibility with influenza A or B viruses, and (4) that these bat-influenza lineages pose little pandemic threat.</p>
</abstract>
<funding-group>
<funding-statement>These studies were supported by; Kansas State University (Start-up SRO001), European Commission FP7-GA258084, Department of Homeland Security Contract HSHQDC-13-C-B0016, and the J. Craig Venter Institute (DEW, Start-up 0394). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</funding-statement>
</funding-group>
<counts>
<page-count count="18"></page-count>
</counts>
<custom-meta-group>
<custom-meta id="data-availability">
<meta-name>Data Availability</meta-name>
<meta-value>The authors confirm that all data underlying the findings are fully available without restriction. All relevant data are within the paper and its Supporting Information files.</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
<notes>
<title>Data Availability</title>
<p>The authors confirm that all data underlying the findings are fully available without restriction. All relevant data are within the paper and its Supporting Information files.</p>
</notes>
</front>
</pmc>
</record>

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