Simultaneous investigation of influenza and enteric viruses in the stools of adult patients consulting in general practice for acute diarrhea.
Identifieur interne : 000979 ( Main/Exploration ); précédent : 000978; suivant : 000980Simultaneous investigation of influenza and enteric viruses in the stools of adult patients consulting in general practice for acute diarrhea.
Auteurs : Christophe Arena [France] ; Jean Amoros [France] ; Véronique Vaillant [France] ; Katia Balay [France] ; Roxane Chikhi-Brachet [France] ; Laurent Varesi [France] ; Jean Arrighi [France] ; Thierry Blanchon [France] ; Fabrice Carrat [France] ; Thomas Hanslik [France] ; Alessandra Falchi [France]Source :
- Virology Journal [ 1743-422X ] ; 2012-06-18.
English descriptors
Abstract
ABSTRACT: BACKGROUND: Gastrointestinal symptoms are not an uncommon manifestation of an influenza virusinfection. In the present study, we aimed to investigate the presence of influenza viruses inthe stools of adult patients consulting their general practitioner for uncomplicated acutediarrhea (AD) and the proportion of concurrent infections by enteric and influenza viruses. METHOD: A case-control study was conducted from December 2010 to April 2011. Stool specimenswere collected and tested for influenza viruses A (seasonal A/H3N2 and pandemic A/H1N1)and B, and for four enteric viruses (astrovirus, group A rotavirus, human enteric adenovirus,norovirus of genogroups I - NoVGI - and genogroup II - NoVGII). RESULTS: General practitioners enrolled 138 cases and 93 controls. Of the 138 stool specimenscollected, 92 (66.7%) were positive for at least one of the four enteric viruses analysed and 10(7.2%) tested positive for one influenza virus. None of these 10 influenza positive patientsreported respiratory symptoms. In five influenza-positive patients (3.6%), we also detectedone enteric virus, with 4 of them being positive for influenza B (2 had co-detection withNoVGI, 1 with NoVGII, and 1 with astrovirus). None of the 93 controls tested positive forone of the enteric and/or other influenza viruses we investigated. CONCLUSIONS: In this study we showed that the simultaneous detection of influenza and enteric viruses is nota rare event. We have also reported, for the first time in general practice, the presence ofseasonal and pandemic influenza viruses in the stools of adult patients consulting foruncomplicated AD. A simultaneous investigation of enteric and influenza viruses in patientscomplaining of gastrointestinal symptoms could be useful for future studies to better identifythe agents responsible for AD.
Url:
DOI: 10.1186/1743-422X-9-116
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Hal, to step Corpus: 000265
- to stream Hal, to step Curation: 000265
- to stream Hal, to step Checkpoint: 000189
- to stream Main, to step Merge: 000980
- to stream Main, to step Curation: 000979
Le document en format XML
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wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-204584" status="INCOMING"> <orgName>Laboratoire de Virologie</orgName> <desc> <address> <addrLine>Avenue Jean Nicoli, BP 52, 20250 Corte</addrLine> <country key="FR"></country> </address> </desc> <listRelation> <relation active="#struct-300269" type="direct"></relation> </listRelation> <tutelles><tutelle active="#struct-300269" type="direct"><org type="institution" xml:id="struct-300269" status="VALID"> <orgName>Université Pascal Paoli</orgName> <orgName type="acronym">UPP</orgName> <desc> <address> <country key="FR"></country> </address> <ref type="url">https://www.universita.corsica/fr/</ref> </desc> </org></tutelle></tutelles></hal:affiliation><country>France</country></affiliation></author><author><name sortKey="Amoros, Jean" sort="Amoros, Jean" uniqKey="Amoros J" first="Jean" last="Amoros">Jean Amoros</name><affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-204584" status="INCOMING"> 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type="direct"><org type="institution" xml:id="struct-350116" status="INCOMING"> <orgName>Observatoire de l'Environnement de la Corse</orgName> <desc> <address> <country key="FR"></country> </address> </desc> </org></tutelle></tutelles></hal:affiliation><country>France</country></affiliation></author><author><name sortKey="Blanchon, Thierry" sort="Blanchon, Thierry" uniqKey="Blanchon T" first="Thierry" last="Blanchon">Thierry Blanchon</name><affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-3065" status="OLD"> <orgName>Epidémiologie des maladies infectieuses et modélisation</orgName> <orgName type="acronym">ESIM</orgName> <desc> <address> <addrLine>Faculte de Médecine Saint-Antoine 27, Rue Chaligny 75571 Paris Cedex 12</addrLine> <country key="FR"></country> </address> <ref type="url">http://www.u707.jussieu.fr</ref> </desc> <listRelation> <relation active="#struct-93591" type="direct"></relation> <relation name="U707" active="#struct-303623" type="direct"></relation> </listRelation> <tutelles><tutelle active="#struct-93591" type="direct"><org type="institution" xml:id="struct-93591" status="OLD"> <orgName>Université Pierre et Marie Curie - Paris 6</orgName> <orgName type="acronym">UPMC</orgName> <date type="end">2017-12-31</date> <desc> <address> <addrLine>4 place Jussieu - 75005 Paris</addrLine> <country key="FR"></country> </address> <ref type="url">http://www.upmc.fr/</ref> </desc> </org></tutelle><tutelle name="U707" active="#struct-303623" type="direct"><org type="institution" xml:id="struct-303623" status="VALID"> <idno type="IdRef">026388278</idno> <orgName>Institut National de la Santé et de la Recherche Médicale</orgName> <orgName type="acronym">INSERM</orgName> <desc> <address> <addrLine>101, rue de Tolbiac, 75013 Paris </addrLine> <country key="FR"></country> </address> <ref type="url">http://www.inserm.fr</ref> </desc> </org></tutelle></tutelles></hal:affiliation><country>France</country></affiliation></author><author><name sortKey="Carrat, Fabrice" sort="Carrat, Fabrice" uniqKey="Carrat F" first="Fabrice" last="Carrat">Fabrice Carrat</name><affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-3065" status="OLD"> <orgName>Epidémiologie des maladies infectieuses et modélisation</orgName> <orgName type="acronym">ESIM</orgName> <desc> <address> <addrLine>Faculte de Médecine Saint-Antoine 27, Rue Chaligny 75571 Paris Cedex 12</addrLine> <country key="FR"></country> </address> <ref type="url">http://www.u707.jussieu.fr</ref> </desc> <listRelation> <relation active="#struct-93591" type="direct"></relation> <relation name="U707" active="#struct-303623" type="direct"></relation> </listRelation> <tutelles><tutelle active="#struct-93591" type="direct"><org type="institution" xml:id="struct-93591" status="OLD"> <orgName>Université Pierre et Marie Curie - Paris 6</orgName> <orgName type="acronym">UPMC</orgName> <date type="end">2017-12-31</date> <desc> <address> <addrLine>4 place Jussieu - 75005 Paris</addrLine> <country key="FR"></country> </address> <ref type="url">http://www.upmc.fr/</ref> </desc> </org></tutelle><tutelle name="U707" active="#struct-303623" type="direct"><org type="institution" xml:id="struct-303623" status="VALID"> <idno type="IdRef">026388278</idno> <orgName>Institut National de la Santé et de la Recherche Médicale</orgName> <orgName type="acronym">INSERM</orgName> <desc> <address> <addrLine>101, rue de Tolbiac, 75013 Paris </addrLine> <country key="FR"></country> </address> <ref type="url">http://www.inserm.fr</ref> </desc> </org></tutelle></tutelles></hal:affiliation><country>France</country></affiliation></author><author><name sortKey="Hanslik, Thomas" sort="Hanslik, Thomas" uniqKey="Hanslik T" first="Thomas" last="Hanslik">Thomas Hanslik</name><affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-3065" status="OLD"> <orgName>Epidémiologie des maladies infectieuses et modélisation</orgName> <orgName type="acronym">ESIM</orgName> <desc> <address> <addrLine>Faculte de Médecine Saint-Antoine 27, Rue Chaligny 75571 Paris Cedex 12</addrLine> <country key="FR"></country> </address> <ref type="url">http://www.u707.jussieu.fr</ref> </desc> <listRelation> <relation active="#struct-93591" type="direct"></relation> <relation name="U707" active="#struct-303623" type="direct"></relation> </listRelation> <tutelles><tutelle active="#struct-93591" type="direct"><org type="institution" xml:id="struct-93591" status="OLD"> <orgName>Université Pierre et Marie Curie - Paris 6</orgName> <orgName type="acronym">UPMC</orgName> <date type="end">2017-12-31</date> <desc> <address> <addrLine>4 place Jussieu - 75005 Paris</addrLine> <country key="FR"></country> </address> <ref type="url">http://www.upmc.fr/</ref> </desc> </org></tutelle><tutelle name="U707" active="#struct-303623" type="direct"><org type="institution" xml:id="struct-303623" status="VALID"> <idno type="IdRef">026388278</idno> <orgName>Institut National de la Santé et de la Recherche Médicale</orgName> <orgName type="acronym">INSERM</orgName> <desc> <address> <addrLine>101, rue de Tolbiac, 75013 Paris </addrLine> <country key="FR"></country> </address> <ref type="url">http://www.inserm.fr</ref> </desc> </org></tutelle></tutelles></hal:affiliation><country>France</country></affiliation></author><author><name sortKey="Falchi, Alessandra" sort="Falchi, Alessandra" uniqKey="Falchi A" first="Alessandra" last="Falchi">Alessandra Falchi</name><affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-204584" status="INCOMING"> <orgName>Laboratoire de Virologie</orgName> <desc> <address> <addrLine>Avenue Jean Nicoli, BP 52, 20250 Corte</addrLine> <country key="FR"></country> </address> </desc> <listRelation> <relation active="#struct-300269" type="direct"></relation> </listRelation> <tutelles><tutelle active="#struct-300269" type="direct"><org type="institution" xml:id="struct-300269" status="VALID"> <orgName>Université Pascal Paoli</orgName> <orgName type="acronym">UPP</orgName> <desc> <address> <country key="FR"></country> </address> <ref type="url">https://www.universita.corsica/fr/</ref> </desc> </org></tutelle></tutelles></hal:affiliation><country>France</country></affiliation></author></analytic><idno type="DOI">10.1186/1743-422X-9-116</idno><series><title level="j">Virology Journal</title><idno type="ISSN">1743-422X</idno><imprint><date type="datePub">2012-06-18</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="mix" xml:lang="en"><term>Co-infection</term><term>Enteric virus</term><term>General practice</term><term>Influenza virus</term><term>Stools</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"> <p>ABSTRACT: BACKGROUND: Gastrointestinal symptoms are not an uncommon manifestation of an influenza virusinfection. In the present study, we aimed to investigate the presence of influenza viruses inthe stools of adult patients consulting their general practitioner for uncomplicated acutediarrhea (AD) and the proportion of concurrent infections by enteric and influenza viruses. METHOD: A case-control study was conducted from December 2010 to April 2011. Stool specimenswere collected and tested for influenza viruses A (seasonal A/H3N2 and pandemic A/H1N1)and B, and for four enteric viruses (astrovirus, group A rotavirus, human enteric adenovirus,norovirus of genogroups I - NoVGI - and genogroup II - NoVGII). RESULTS: General practitioners enrolled 138 cases and 93 controls. Of the 138 stool specimenscollected, 92 (66.7%) were positive for at least one of the four enteric viruses analysed and 10(7.2%) tested positive for one influenza virus. None of these 10 influenza positive patientsreported respiratory symptoms. In five influenza-positive patients (3.6%), we also detectedone enteric virus, with 4 of them being positive for influenza B (2 had co-detection withNoVGI, 1 with NoVGII, and 1 with astrovirus). None of the 93 controls tested positive forone of the enteric and/or other influenza viruses we investigated. CONCLUSIONS: In this study we showed that the simultaneous detection of influenza and enteric viruses is nota rare event. We have also reported, for the first time in general practice, the presence ofseasonal and pandemic influenza viruses in the stools of adult patients consulting foruncomplicated AD. A simultaneous investigation of enteric and influenza viruses in patientscomplaining of gastrointestinal symptoms could be useful for future studies to better identifythe agents responsible for AD.</p> </div></front></TEI><affiliations><list><country><li>France</li></country></list><tree><country name="France"><noRegion><name sortKey="Arena, Christophe" sort="Arena, Christophe" uniqKey="Arena C" first="Christophe" last="Arena">Christophe Arena</name></noRegion><name sortKey="Amoros, Jean" sort="Amoros, Jean" uniqKey="Amoros J" first="Jean" last="Amoros">Jean Amoros</name><name sortKey="Arrighi, Jean" sort="Arrighi, Jean" uniqKey="Arrighi J" first="Jean" last="Arrighi">Jean Arrighi</name><name sortKey="Balay, Katia" sort="Balay, Katia" uniqKey="Balay K" first="Katia" last="Balay">Katia Balay</name><name sortKey="Blanchon, Thierry" sort="Blanchon, Thierry" uniqKey="Blanchon T" first="Thierry" last="Blanchon">Thierry Blanchon</name><name sortKey="Carrat, Fabrice" sort="Carrat, Fabrice" uniqKey="Carrat F" first="Fabrice" last="Carrat">Fabrice Carrat</name><name sortKey="Chikhi Brachet, Roxane" sort="Chikhi Brachet, Roxane" uniqKey="Chikhi Brachet R" first="Roxane" last="Chikhi-Brachet">Roxane Chikhi-Brachet</name><name sortKey="Falchi, Alessandra" sort="Falchi, Alessandra" uniqKey="Falchi A" first="Alessandra" last="Falchi">Alessandra Falchi</name><name sortKey="Hanslik, Thomas" sort="Hanslik, Thomas" uniqKey="Hanslik T" first="Thomas" last="Hanslik">Thomas Hanslik</name><name sortKey="Vaillant, Veronique" sort="Vaillant, Veronique" uniqKey="Vaillant V" first="Véronique" last="Vaillant">Véronique Vaillant</name><name sortKey="Varesi, Laurent" sort="Varesi, Laurent" uniqKey="Varesi L" first="Laurent" last="Varesi">Laurent Varesi</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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