Microarray for diagnostics of human pathogenic influenza-a virus subtypes
Identifieur interne : 000615 ( Istex/Corpus ); précédent : 000614; suivant : 000616Microarray for diagnostics of human pathogenic influenza-a virus subtypes
Auteurs : E. V. Kostina ; V. A. Ryabinin ; A. P. Agafonov ; V. A. Ternovoi ; A. N. SinyakovSource :
- Russian Journal of Bioorganic Chemistry [ 1068-1620 ] ; 2011-09-01.
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Abstract
Abstract: An oligonucleotide microarray was developed for diagnostics of human pathogenic influenza-A virus subtypes. It contained discriminating probes for H1, H2, H3, H5, H7, and H9 subtypes of hemagglutinin and for N1, N2, and N7 subtypes of neuraminidase. An additional set of probes was used for revealing the M-gene of the influenza-A virus. The proposed microarray was tested on samples of pathogenic H5N1 avian influenza virus, pandemic H1N1 swine influenza virus, and seasonal H1N1 and H3N2 influenza viruses. The microarray can be used for the analysis both of cultivated strains and clinical specimens.
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DOI: 10.1134/S1068162011050098
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Lavrent’eva 8, 630090, Novosibirsk, Russia</mods:affiliation></affiliation></author></analytic><monogr></monogr><series><title level="j">Russian Journal of Bioorganic Chemistry</title><title level="j" type="abbrev">Russ J Bioorg Chem</title><idno type="ISSN">1068-1620</idno><idno type="eISSN">1608-330X</idno><imprint><publisher>SP MAIK Nauka/Interperiodica</publisher><pubPlace>Dordrecht</pubPlace><date type="published" when="2011-09-01">2011-09-01</date><biblScope unit="volume">37</biblScope><biblScope unit="issue">5</biblScope><biblScope unit="page" from="644">644</biblScope><biblScope unit="page" to="646">646</biblScope></imprint><idno type="ISSN">1068-1620</idno></series></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">1068-1620</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>diagnostics</term><term>influenza A virus</term><term>microarray</term><term>typing</term></keywords></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Abstract: An oligonucleotide microarray was developed for diagnostics of human pathogenic influenza-A virus subtypes. It contained discriminating probes for H1, H2, H3, H5, H7, and H9 subtypes of hemagglutinin and for N1, N2, and N7 subtypes of neuraminidase. An additional set of probes was used for revealing the M-gene of the influenza-A virus. The proposed microarray was tested on samples of pathogenic H5N1 avian influenza virus, pandemic H1N1 swine influenza virus, and seasonal H1N1 and H3N2 influenza viruses. The microarray can be used for the analysis both of cultivated strains and clinical specimens.</div></front></TEI><istex><corpusName>springer-journals</corpusName><author><json:item><name>E. V. Kostina</name><affiliations><json:string>Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, pr. Lavrent’eva 8, 630090, Novosibirsk, Russia</json:string><json:string>E-mail: kostinaelena@mail.ru</json:string></affiliations></json:item><json:item><name>V. A. 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CorrespondingAffiliationID="Aff1"><AuthorName DisplayOrder="Western"><GivenName>E.</GivenName><GivenName>V.</GivenName><FamilyName>Kostina</FamilyName></AuthorName><Contact><Phone>+7 (383) 363-51-72</Phone><Email>kostinaelena@mail.ru</Email></Contact></Author><Author AffiliationIDS="Aff1"><AuthorName DisplayOrder="Western"><GivenName>V.</GivenName><GivenName>A.</GivenName><FamilyName>Ryabinin</FamilyName></AuthorName></Author><Author AffiliationIDS="Aff2"><AuthorName DisplayOrder="Western"><GivenName>A.</GivenName><GivenName>P.</GivenName><FamilyName>Agafonov</FamilyName></AuthorName></Author><Author AffiliationIDS="Aff2"><AuthorName DisplayOrder="Western"><GivenName>V.</GivenName><GivenName>A.</GivenName><FamilyName>Ternovoi</FamilyName></AuthorName></Author><Author AffiliationIDS="Aff1"><AuthorName DisplayOrder="Western"><GivenName>A.</GivenName><GivenName>N.</GivenName><FamilyName>Sinyakov</FamilyName></AuthorName></Author><Affiliation ID="Aff1"><OrgDivision>Institute of Chemical Biology and Fundamental Medicine</OrgDivision><OrgName>Siberian Branch of Russian Academy of Sciences</OrgName><OrgAddress><Street>pr. Lavrent’eva 8</Street><City>Novosibirsk</City><Postcode>630090</Postcode><Country Code="RU">Russia</Country></OrgAddress></Affiliation><Affiliation ID="Aff2"><OrgDivision>Department of Molecular Virology</OrgDivision><OrgName>State Research Center of Virology and Biotechnology VECTOR</OrgName><OrgAddress><City>Koltsovo, Novosibirsk region</City><Country Code="RU">Russia</Country></OrgAddress></Affiliation></AuthorGroup><Abstract ID="Abs1" Language="En"><Heading>Abstract</Heading><Para TextBreak="No">An oligonucleotide microarray was developed for diagnostics of human pathogenic influenza-A virus subtypes. It contained discriminating probes for H1, H2, H3, H5, H7, and H9 subtypes of hemagglutinin and for N1, N2, and N7 subtypes of neuraminidase. An additional set of probes was used for revealing the M-gene of the influenza-A virus. The proposed microarray was tested on samples of pathogenic H5N1 avian influenza virus, pandemic H1N1 swine influenza virus, and seasonal H1N1 and H3N2 influenza viruses. The microarray can be used for the analysis both of cultivated strains and clinical specimens.</Para></Abstract><KeywordGroup Language="En"><Heading>Keywords</Heading><Keyword>influenza A virus</Keyword><Keyword>microarray</Keyword><Keyword>typing</Keyword><Keyword>diagnostics</Keyword></KeywordGroup><ArticleNote Type="Misc"><SimplePara>Original Russian Text © E.V. Kostina, V.A. Ryabinin, A.P. Agafonov, V.A. Ternovoi, A.N. Sinyakov, 2011, published in Bioorganicheskaya Khimiya, 2011, Vol. 37, No. 5, pp. 715–717.</SimplePara></ArticleNote></ArticleHeader><NoBody></NoBody></Article></Issue></Volume></Journal></Publisher></istex:document></istex:metadataXml><mods version="3.6"><titleInfo lang="en"><title>Microarray for diagnostics of human pathogenic influenza-a virus subtypes</title></titleInfo><titleInfo type="alternative" contentType="CDATA"><title>Microarray for diagnostics of human pathogenic influenza-a virus subtypes</title></titleInfo><name type="personal" displayLabel="corresp"><namePart type="given">E.</namePart><namePart type="given">V.</namePart><namePart type="family">Kostina</namePart><affiliation>Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, pr. 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Lavrent’eva 8, 630090, Novosibirsk, Russia</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">A.</namePart><namePart type="given">P.</namePart><namePart type="family">Agafonov</namePart><affiliation>Department of Molecular Virology, State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk region, Russia</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">V.</namePart><namePart type="given">A.</namePart><namePart type="family">Ternovoi</namePart><affiliation>Department of Molecular Virology, State Research Center of Virology and Biotechnology VECTOR, Koltsovo, Novosibirsk region, Russia</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">A.</namePart><namePart type="given">N.</namePart><namePart type="family">Sinyakov</namePart><affiliation>Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, pr. Lavrent’eva 8, 630090, Novosibirsk, Russia</affiliation><role><roleTerm type="text">author</roleTerm></role></name><typeOfResource>text</typeOfResource><genre type="review-article" displayLabel="Letter" authority="ISTEX" authorityURI="https://content-type.data.istex.fr" valueURI="https://content-type.data.istex.fr/ark:/67375/XTP-L5L7X3NF-P">review-article</genre><originInfo><publisher>SP MAIK Nauka/Interperiodica</publisher><place><placeTerm type="text">Dordrecht</placeTerm></place><dateCreated encoding="w3cdtf">2011-02-25</dateCreated><dateIssued encoding="w3cdtf">2011-09-01</dateIssued><copyrightDate encoding="w3cdtf">2011</copyrightDate></originInfo><language><languageTerm type="code" authority="rfc3066">en</languageTerm><languageTerm type="code" authority="iso639-2b">eng</languageTerm></language><abstract lang="en">Abstract: An oligonucleotide microarray was developed for diagnostics of human pathogenic influenza-A virus subtypes. It contained discriminating probes for H1, H2, H3, H5, H7, and H9 subtypes of hemagglutinin and for N1, N2, and N7 subtypes of neuraminidase. An additional set of probes was used for revealing the M-gene of the influenza-A virus. The proposed microarray was tested on samples of pathogenic H5N1 avian influenza virus, pandemic H1N1 swine influenza virus, and seasonal H1N1 and H3N2 influenza viruses. The microarray can be used for the analysis both of cultivated strains and clinical specimens.</abstract><note>Letter to the Editor</note><subject lang="en"><genre>Keywords</genre><topic>influenza A virus</topic><topic>microarray</topic><topic>typing</topic><topic>diagnostics</topic></subject><relatedItem type="host"><titleInfo><title>Russian Journal of Bioorganic Chemistry</title></titleInfo><titleInfo type="abbreviated"><title>Russ J Bioorg Chem</title></titleInfo><genre type="journal" authority="ISTEX" authorityURI="https://publication-type.data.istex.fr" valueURI="https://publication-type.data.istex.fr/ark:/67375/JMC-0GLKJH51-B">journal</genre><originInfo><publisher>Springer</publisher><dateIssued encoding="w3cdtf">2011-10-01</dateIssued><copyrightDate encoding="w3cdtf">2011</copyrightDate></originInfo><subject><genre>Life Sciences</genre><topic>Biochemistry, general</topic><topic>Biomedicine general</topic><topic>Bioorganic Chemistry</topic><topic>Organic Chemistry</topic></subject><identifier type="ISSN">1068-1620</identifier><identifier type="eISSN">1608-330X</identifier><identifier type="JournalID">11171</identifier><identifier type="IssueArticleCount">19</identifier><identifier type="VolumeIssueCount">7</identifier><part><date>2011</date><detail type="volume"><number>37</number><caption>vol.</caption></detail><detail type="issue"><number>5</number><caption>no.</caption></detail><extent unit="pages"><start>644</start><end>646</end></extent></part><recordInfo><recordOrigin>Pleiades Publishing, Ltd., 2011</recordOrigin></recordInfo></relatedItem><identifier type="istex">214169B795454FC2E1EE8A823F65F089B994D552</identifier><identifier type="ark">ark:/67375/VQC-NJHNG641-7</identifier><identifier type="DOI">10.1134/S1068162011050098</identifier><identifier type="ArticleID">6293</identifier><identifier type="ArticleID">S1068162011050098</identifier><accessCondition type="use and reproduction" contentType="copyright">Pleiades Publishing, Ltd., 2011</accessCondition><recordInfo><recordContentSource authority="ISTEX" authorityURI="https://loaded-corpus.data.istex.fr" valueURI="https://loaded-corpus.data.istex.fr/ark:/67375/XBH-3XSW68JL-F">springer</recordContentSource><recordOrigin>Pleiades Publishing, Ltd., 2011</recordOrigin></recordInfo></mods><json:item><extension>json</extension><original>false</original><mimetype>application/json</mimetype><uri>https://api.istex.fr/ark:/67375/VQC-NJHNG641-7/record.json</uri></json:item></metadata><serie></serie></istex></record>Pour manipuler ce document sous Unix (Dilib)
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