Possible basis for the emergence of H1N1 viruses with pandemic potential from avian hosts.
Identifieur interne : 000206 ( Main/Exploration ); précédent : 000205; suivant : 000207Possible basis for the emergence of H1N1 viruses with pandemic potential from avian hosts.
Auteurs : Zeynep A. Koçer [États-Unis] ; Scott Krauss [États-Unis] ; Mark Zanin [États-Unis] ; Angela Danner [États-Unis] ; Shelly Gulati [États-Unis] ; Jeremy C. Jones [États-Unis] ; Kimberly Friedman [États-Unis] ; Allison Graham [États-Unis] ; Heather Forrest [États-Unis] ; Jon Seiler [États-Unis] ; Gillian M. Air [États-Unis] ; Robert G. Webster [Arabie saoudite]Source :
- Emerging microbes & infections [ 2222-1751 ] ; 2015.
Descripteurs français
- KwdFr :
- Alberta (épidémiologie), Animaux (MeSH), Anseriformes (MeSH), Charadriiformes (MeSH), Fosse nasale (virologie), Furets (MeSH), Grippe chez les oiseaux (transmission), Grippe chez les oiseaux (virologie), Grippe chez les oiseaux (épidémiologie), Génome viral (MeSH), Microbiologie de l'air (MeSH), Migration animale (MeSH), Modèles animaux de maladie humaine (MeSH), Mâle (MeSH), New Jersey (épidémiologie), Phylogenèse (MeSH), Polyosides (métabolisme), Réarrangement des gènes (MeSH), Réplication virale (MeSH), Réservoirs de maladies (MeSH), Sous-type H1N1 du virus de la grippe A (classification), Sous-type H1N1 du virus de la grippe A (génétique), Sous-type H1N1 du virus de la grippe A (isolement et purification).
- MESH :
- génétique : Sous-type H1N1 du virus de la grippe A.
- isolement et purification : Sous-type H1N1 du virus de la grippe A.
- métabolisme : Polyosides, Sous-type H1N1 du virus de la grippe A.
- virologie : Fosse nasale, Grippe chez les oiseaux.
- épidémiologie : Alberta, Grippe chez les oiseaux, New Jersey.
- Animaux, Anseriformes, Charadriiformes, Furets, Génome viral, Microbiologie de l'air, Migration animale, Modèles animaux de maladie humaine, Mâle, Phylogenèse, Réarrangement des gènes, Réplication virale, Réservoirs de maladies.
English descriptors
- KwdEn :
- Air Microbiology (MeSH), Alberta (epidemiology), Animal Migration (MeSH), Animals (MeSH), Anseriformes (MeSH), Charadriiformes (MeSH), Disease Models, Animal (MeSH), Disease Reservoirs (MeSH), Ferrets (MeSH), Gene Rearrangement (MeSH), Genome, Viral (MeSH), Influenza A Virus, H1N1 Subtype (classification), Influenza A Virus, H1N1 Subtype (genetics), Influenza A Virus, H1N1 Subtype (isolation & purification), Influenza in Birds (epidemiology), Influenza in Birds (transmission), Influenza in Birds (virology), Male (MeSH), Nasal Cavity (virology), New Jersey (epidemiology), Phylogeny (MeSH), Polysaccharides (metabolism), Virus Replication (MeSH).
- MESH :
- chemical , metabolism : Polysaccharides.
- geographic , epidemiology : Alberta, New Jersey.
- classification : Influenza A Virus, H1N1 Subtype.
- epidemiology : Influenza in Birds.
- genetics : Influenza A Virus, H1N1 Subtype.
- isolation & purification : Influenza A Virus, H1N1 Subtype.
- transmission : Influenza in Birds.
- virology : Influenza in Birds, Nasal Cavity.
- Air Microbiology, Animal Migration, Animals, Anseriformes, Charadriiformes, Disease Models, Animal, Disease Reservoirs, Ferrets, Gene Rearrangement, Genome, Viral, Male, Phylogeny, Virus Replication.
Abstract
Influenza A viruses of the H1N1 subtype have emerged from the avian influenza gene pool in aquatic birds and caused human pandemics at least twice during the past century. Despite this fact, surprisingly little is known about the H1N1 gene pool in the aquatic bird reservoir. A preliminary study showed that an H1N1 virus from a shorebird of the Charadriiformes order was transmitted between animals through the airborne route of infection, whereas an H1N1 virus from a bird of the Anseriformes order was not. Here we show that two of the three H1N1 viruses isolated from Charadriiformes species in 2009 were transmitted between animals through the airborne route of infection, and five H1N1 isolates from Anseriformes species were not. The one H1N1 virus from a Charadriiformes species that failed to transmit through the airborne route was a reassortant possessing multiple internal gene segments from Anseriformes species. The molecular differences between the airborne-transmissible and non-airborne-transmissible H1N1 viruses were multigenic, involving the selection of virus with human-like receptor-binding specificity (α2-6 sialic acid) and multiple differences in the polymerase complex, mainly in the PB2, PB1-F2, and nonstructural genes.
DOI: 10.1038/emi.2015.40
PubMed: 26251829
PubMed Central: PMC4522614
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Jones</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Friedman, Kimberly" sort="Friedman, Kimberly" uniqKey="Friedman K" first="Kimberly" last="Friedman">Kimberly Friedman</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Graham, Allison" sort="Graham, Allison" uniqKey="Graham A" first="Allison" last="Graham">Allison Graham</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Forrest, Heather" sort="Forrest, Heather" uniqKey="Forrest H" first="Heather" last="Forrest">Heather Forrest</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Seiler, Jon" sort="Seiler, Jon" uniqKey="Seiler J" first="Jon" last="Seiler">Jon Seiler</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Air, Gillian M" sort="Air, Gillian M" uniqKey="Air G" first="Gillian M" last="Air">Gillian M. Air</name><affiliation wicri:level="2"><nlm:affiliation>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104</wicri:regionArea><placeName><region type="state">Oklahoma</region></placeName></affiliation></author><author><name sortKey="Webster, Robert G" sort="Webster, Robert G" uniqKey="Webster R" first="Robert G" last="Webster">Robert G. Webster</name><affiliation wicri:level="1"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University , Jeddah 22254, Saudi Arabia.</nlm:affiliation><country xml:lang="fr">Arabie saoudite</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University , Jeddah 22254</wicri:regionArea><wicri:noRegion>Jeddah 22254</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:26251829</idno><idno type="pmid">26251829</idno><idno type="doi">10.1038/emi.2015.40</idno><idno type="pmc">PMC4522614</idno><idno type="wicri:Area/Main/Corpus">000199</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000199</idno><idno type="wicri:Area/Main/Curation">000199</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000199</idno><idno type="wicri:Area/Main/Exploration">000199</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Possible basis for the emergence of H1N1 viruses with pandemic potential from avian hosts.</title><author><name sortKey="Kocer, Zeynep A" sort="Kocer, Zeynep A" uniqKey="Kocer Z" first="Zeynep A" last="Koçer">Zeynep A. Koçer</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Krauss, Scott" sort="Krauss, Scott" uniqKey="Krauss S" first="Scott" last="Krauss">Scott Krauss</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Zanin, Mark" sort="Zanin, Mark" uniqKey="Zanin M" first="Mark" last="Zanin">Mark Zanin</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Danner, Angela" sort="Danner, Angela" uniqKey="Danner A" first="Angela" last="Danner">Angela Danner</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Gulati, Shelly" sort="Gulati, Shelly" uniqKey="Gulati S" first="Shelly" last="Gulati">Shelly Gulati</name><affiliation wicri:level="2"><nlm:affiliation>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104</wicri:regionArea><placeName><region type="state">Oklahoma</region></placeName></affiliation></author><author><name sortKey="Jones, Jeremy C" sort="Jones, Jeremy C" uniqKey="Jones J" first="Jeremy C" last="Jones">Jeremy C. Jones</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Friedman, Kimberly" sort="Friedman, Kimberly" uniqKey="Friedman K" first="Kimberly" last="Friedman">Kimberly Friedman</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Graham, Allison" sort="Graham, Allison" uniqKey="Graham A" first="Allison" last="Graham">Allison Graham</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Forrest, Heather" sort="Forrest, Heather" uniqKey="Forrest H" first="Heather" last="Forrest">Heather Forrest</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Seiler, Jon" sort="Seiler, Jon" uniqKey="Seiler J" first="Jon" last="Seiler">Jon Seiler</name><affiliation wicri:level="2"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Air, Gillian M" sort="Air, Gillian M" uniqKey="Air G" first="Gillian M" last="Air">Gillian M. Air</name><affiliation wicri:level="2"><nlm:affiliation>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104</wicri:regionArea><placeName><region type="state">Oklahoma</region></placeName></affiliation></author><author><name sortKey="Webster, Robert G" sort="Webster, Robert G" uniqKey="Webster R" first="Robert G" last="Webster">Robert G. Webster</name><affiliation wicri:level="1"><nlm:affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University , Jeddah 22254, Saudi Arabia.</nlm:affiliation><country xml:lang="fr">Arabie saoudite</country><wicri:regionArea>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University , Jeddah 22254</wicri:regionArea><wicri:noRegion>Jeddah 22254</wicri:noRegion></affiliation></author></analytic><series><title level="j">Emerging microbes & infections</title><idno type="ISSN">2222-1751</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Air Microbiology (MeSH)</term><term>Alberta (epidemiology)</term><term>Animal Migration (MeSH)</term><term>Animals (MeSH)</term><term>Anseriformes (MeSH)</term><term>Charadriiformes (MeSH)</term><term>Disease Models, Animal (MeSH)</term><term>Disease Reservoirs (MeSH)</term><term>Ferrets (MeSH)</term><term>Gene Rearrangement (MeSH)</term><term>Genome, Viral (MeSH)</term><term>Influenza A Virus, H1N1 Subtype (classification)</term><term>Influenza A Virus, H1N1 Subtype (genetics)</term><term>Influenza A Virus, H1N1 Subtype (isolation & purification)</term><term>Influenza in Birds (epidemiology)</term><term>Influenza in Birds (transmission)</term><term>Influenza in Birds (virology)</term><term>Male (MeSH)</term><term>Nasal Cavity (virology)</term><term>New Jersey (epidemiology)</term><term>Phylogeny (MeSH)</term><term>Polysaccharides (metabolism)</term><term>Virus Replication (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Alberta (épidémiologie)</term><term>Animaux (MeSH)</term><term>Anseriformes (MeSH)</term><term>Charadriiformes (MeSH)</term><term>Fosse nasale (virologie)</term><term>Furets (MeSH)</term><term>Grippe chez les oiseaux (transmission)</term><term>Grippe chez les oiseaux (virologie)</term><term>Grippe chez les oiseaux (épidémiologie)</term><term>Génome viral (MeSH)</term><term>Microbiologie de l'air (MeSH)</term><term>Migration animale (MeSH)</term><term>Modèles animaux de maladie humaine (MeSH)</term><term>Mâle (MeSH)</term><term>New Jersey (épidémiologie)</term><term>Phylogenèse (MeSH)</term><term>Polyosides (métabolisme)</term><term>Réarrangement des gènes (MeSH)</term><term>Réplication virale (MeSH)</term><term>Réservoirs de maladies (MeSH)</term><term>Sous-type H1N1 du virus de la grippe A (classification)</term><term>Sous-type H1N1 du virus de la grippe A (génétique)</term><term>Sous-type H1N1 du virus de la grippe A (isolement et purification)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Polysaccharides</term></keywords><keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Alberta</term><term>New Jersey</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Influenza A Virus, H1N1 Subtype</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Influenza in Birds</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Influenza A Virus, H1N1 Subtype</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Sous-type H1N1 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Influenza A Virus, H1N1 Subtype</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Sous-type H1N1 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Polyosides</term><term>Sous-type H1N1 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="transmission" xml:lang="en"><term>Influenza in Birds</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Fosse nasale</term><term>Grippe chez les oiseaux</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Influenza in Birds</term><term>Nasal Cavity</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Alberta</term><term>Grippe chez les oiseaux</term><term>New Jersey</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Air Microbiology</term><term>Animal Migration</term><term>Animals</term><term>Anseriformes</term><term>Charadriiformes</term><term>Disease Models, Animal</term><term>Disease Reservoirs</term><term>Ferrets</term><term>Gene Rearrangement</term><term>Genome, Viral</term><term>Male</term><term>Phylogeny</term><term>Virus Replication</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Anseriformes</term><term>Charadriiformes</term><term>Furets</term><term>Génome viral</term><term>Microbiologie de l'air</term><term>Migration animale</term><term>Modèles animaux de maladie humaine</term><term>Mâle</term><term>Phylogenèse</term><term>Réarrangement des gènes</term><term>Réplication virale</term><term>Réservoirs de maladies</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Influenza A viruses of the H1N1 subtype have emerged from the avian influenza gene pool in aquatic birds and caused human pandemics at least twice during the past century. Despite this fact, surprisingly little is known about the H1N1 gene pool in the aquatic bird reservoir. A preliminary study showed that an H1N1 virus from a shorebird of the Charadriiformes order was transmitted between animals through the airborne route of infection, whereas an H1N1 virus from a bird of the Anseriformes order was not. Here we show that two of the three H1N1 viruses isolated from Charadriiformes species in 2009 were transmitted between animals through the airborne route of infection, and five H1N1 isolates from Anseriformes species were not. The one H1N1 virus from a Charadriiformes species that failed to transmit through the airborne route was a reassortant possessing multiple internal gene segments from Anseriformes species. The molecular differences between the airborne-transmissible and non-airborne-transmissible H1N1 viruses were multigenic, involving the selection of virus with human-like receptor-binding specificity (α2-6 sialic acid) and multiple differences in the polymerase complex, mainly in the PB2, PB1-F2, and nonstructural genes. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26251829</PMID><DateCompleted><Year>2016</Year><Month>07</Month><Day>27</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">2222-1751</ISSN><JournalIssue CitedMedium="Print"><Volume>4</Volume><Issue>7</Issue><PubDate><Year>2015</Year><Month>Jul</Month></PubDate></JournalIssue><Title>Emerging microbes & infections</Title><ISOAbbreviation>Emerg Microbes Infect</ISOAbbreviation></Journal><ArticleTitle>Possible basis for the emergence of H1N1 viruses with pandemic potential from avian hosts.</ArticleTitle><Pagination><MedlinePgn>e40</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/emi.2015.40</ELocationID><Abstract><AbstractText>Influenza A viruses of the H1N1 subtype have emerged from the avian influenza gene pool in aquatic birds and caused human pandemics at least twice during the past century. Despite this fact, surprisingly little is known about the H1N1 gene pool in the aquatic bird reservoir. A preliminary study showed that an H1N1 virus from a shorebird of the Charadriiformes order was transmitted between animals through the airborne route of infection, whereas an H1N1 virus from a bird of the Anseriformes order was not. Here we show that two of the three H1N1 viruses isolated from Charadriiformes species in 2009 were transmitted between animals through the airborne route of infection, and five H1N1 isolates from Anseriformes species were not. The one H1N1 virus from a Charadriiformes species that failed to transmit through the airborne route was a reassortant possessing multiple internal gene segments from Anseriformes species. The molecular differences between the airborne-transmissible and non-airborne-transmissible H1N1 viruses were multigenic, involving the selection of virus with human-like receptor-binding specificity (α2-6 sialic acid) and multiple differences in the polymerase complex, mainly in the PB2, PB1-F2, and nonstructural genes. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Koçer</LastName><ForeName>Zeynep A</ForeName><Initials>ZA</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Krauss</LastName><ForeName>Scott</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zanin</LastName><ForeName>Mark</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Danner</LastName><ForeName>Angela</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gulati</LastName><ForeName>Shelly</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jones</LastName><ForeName>Jeremy C</ForeName><Initials>JC</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Friedman</LastName><ForeName>Kimberly</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Graham</LastName><ForeName>Allison</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Forrest</LastName><ForeName>Heather</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Seiler</LastName><ForeName>Jon</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Air</LastName><ForeName>Gillian M</ForeName><Initials>GM</Initials><AffiliationInfo><Affiliation>Department of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center , Oklahoma City, OK 73104, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Webster</LastName><ForeName>Robert G</ForeName><Initials>RG</Initials><AffiliationInfo><Affiliation>Department of Infectious Diseases, Division of Virology, St. Jude Children's Research Hospital , Memphis, TN 38105, USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University , Jeddah 22254, Saudi Arabia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>HHSN272201400006C</GrantID><Acronym>AI</Acronym><Agency>NIAID NIH HHS</Agency><Country>United States</Country></Grant><Grant><GrantID>HHSN272201400006C</GrantID><Agency>PHS HHS</Agency><Country>United States</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D052061">Research Support, N.I.H., Extramural</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>07</Month><Day>01</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Emerg Microbes Infect</MedlineTA><NlmUniqueID>101594885</NlmUniqueID><ISSNLinking>2222-1751</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D011134">Polysaccharides</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000391" MajorTopicYN="Y">Air Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000416" MajorTopicYN="N" Type="Geographic">Alberta</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D025041" MajorTopicYN="N">Animal Migration</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D046090" MajorTopicYN="Y">Anseriformes</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D046091" MajorTopicYN="Y">Charadriiformes</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004195" MajorTopicYN="N">Disease Models, Animal</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004197" MajorTopicYN="N">Disease Reservoirs</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005289" MajorTopicYN="N">Ferrets</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015321" MajorTopicYN="N">Gene Rearrangement</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016679" MajorTopicYN="N">Genome, Viral</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D053118" MajorTopicYN="Y">Influenza A Virus, H1N1 Subtype</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005585" MajorTopicYN="N">Influenza in Birds</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName><QualifierName UI="Q000635" MajorTopicYN="Y">transmission</QualifierName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008297" MajorTopicYN="N">Male</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009296" MajorTopicYN="N">Nasal Cavity</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D009515" MajorTopicYN="N" Type="Geographic">New Jersey</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D011134" MajorTopicYN="N">Polysaccharides</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014779" MajorTopicYN="N">Virus Replication</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Anseriformes</Keyword><Keyword MajorTopicYN="N">Charadriiformes</Keyword><Keyword MajorTopicYN="N">H1N1</Keyword><Keyword MajorTopicYN="N">avian</Keyword><Keyword MajorTopicYN="N">ferret model transmission</Keyword></KeywordList><GeneralNote Owner="NLM">Original DateCompleted: 20150807</GeneralNote></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2015</Year><Month>04</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2015</Year><Month>05</Month><Day>20</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>05</Month><Day>22</Day></PubMedPubDate><PubMedPubDate 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