Genetic structure of avian influenza viruses from ducks of the Atlantic flyway of North America.
Identifieur interne : 000299 ( Main/Exploration ); précédent : 000298; suivant : 000300Genetic structure of avian influenza viruses from ducks of the Atlantic flyway of North America.
Auteurs : Yanyan Huang [Canada] ; Michelle Wille [Canada] ; Ashley Dobbin [Canada] ; Natasha M. Walzthöni [Canada] ; Gregory J. Robertson [Canada] ; Davor Ojkic [Canada] ; Hugh Whitney [Canada] ; Andrew S. Lang [Canada]Source :
- PloS one [ 1932-6203 ] ; 2014.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Virus de la grippe A.
- virologie : Canards, Grippe chez les oiseaux.
- Animaux, Flux des gènes, Gènes viraux, Génotype, Phylogenèse, Terre-Neuve-et-Labrador, Variation génétique.
English descriptors
- KwdEn :
- MESH :
- geographic : Newfoundland and Labrador.
- genetics : Influenza A virus.
- virology : Ducks, Influenza in Birds.
- Animals, Gene Flow, Genes, Viral, Genetic Variation, Genotype, Phylogeny.
Abstract
Wild birds, including waterfowl such as ducks, are reservoir hosts of influenza A viruses. Despite the increased number of avian influenza virus (AIV) genome sequences available, our understanding of AIV genetic structure and transmission through space and time in waterfowl in North America is still limited. In particular, AIVs in ducks of the Atlantic flyway of North America have not been thoroughly investigated. To begin to address this gap, we analyzed 109 AIV genome sequences from ducks in the Atlantic flyway to determine their genetic structure and to document the extent of gene flow in the context of sequences from other locations and other avian and mammalian host groups. The analyses included 25 AIVs from ducks from Newfoundland, Canada, from 2008-2011 and 84 available reference duck AIVs from the Atlantic flyway from 2006-2011. A vast diversity of viral genes and genomes was identified in the 109 viruses. The genetic structure differed amongst the 8 viral segments with predominant single lineages found for the PB2, PB1 and M segments, increased diversity found for the PA, NP and NS segments (2, 3 and 3 lineages, respectively), and the highest diversity found for the HA and NA segments (12 and 9 lineages, respectively). Identification of inter-hemispheric transmissions was rare with only 2% of the genes of Eurasian origin. Virus transmission between ducks and other bird groups was investigated, with 57.3% of the genes having highly similar (≥99% nucleotide identity) genes detected in birds other than ducks. Transmission between North American flyways has been frequent and 75.8% of the genes were highly similar to genes found in other North American flyways. However, the duck AIV genes did display spatial distribution bias, which was demonstrated by the different population sizes of specific viral genes in one or two neighbouring flyways compared to more distant flyways.
DOI: 10.1371/journal.pone.0086999
PubMed: 24498009
PubMed Central: PMC3907406
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Walzthöni</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador</wicri:regionArea><wicri:noRegion>Newfoundland and Labrador</wicri:noRegion></affiliation></author><author><name sortKey="Robertson, Gregory J" sort="Robertson, Gregory J" uniqKey="Robertson G" first="Gregory J" last="Robertson">Gregory J. 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Lang</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador</wicri:regionArea><wicri:noRegion>Newfoundland and Labrador</wicri:noRegion></affiliation></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term><term>Ducks (virology)</term><term>Gene Flow (MeSH)</term><term>Genes, Viral (MeSH)</term><term>Genetic Variation (MeSH)</term><term>Genotype (MeSH)</term><term>Influenza A virus (genetics)</term><term>Influenza in Birds (virology)</term><term>Newfoundland and Labrador (MeSH)</term><term>Phylogeny (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux (MeSH)</term><term>Canards (virologie)</term><term>Flux des gènes (MeSH)</term><term>Grippe chez les oiseaux (virologie)</term><term>Gènes viraux (MeSH)</term><term>Génotype (MeSH)</term><term>Phylogenèse (MeSH)</term><term>Terre-Neuve-et-Labrador (MeSH)</term><term>Variation génétique (MeSH)</term><term>Virus de la grippe A (génétique)</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Newfoundland and Labrador</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Influenza A virus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Canards</term><term>Grippe chez les oiseaux</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Ducks</term><term>Influenza in Birds</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Gene Flow</term><term>Genes, Viral</term><term>Genetic Variation</term><term>Genotype</term><term>Phylogeny</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Flux des gènes</term><term>Gènes viraux</term><term>Génotype</term><term>Phylogenèse</term><term>Terre-Neuve-et-Labrador</term><term>Variation génétique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Wild birds, including waterfowl such as ducks, are reservoir hosts of influenza A viruses. Despite the increased number of avian influenza virus (AIV) genome sequences available, our understanding of AIV genetic structure and transmission through space and time in waterfowl in North America is still limited. In particular, AIVs in ducks of the Atlantic flyway of North America have not been thoroughly investigated. To begin to address this gap, we analyzed 109 AIV genome sequences from ducks in the Atlantic flyway to determine their genetic structure and to document the extent of gene flow in the context of sequences from other locations and other avian and mammalian host groups. The analyses included 25 AIVs from ducks from Newfoundland, Canada, from 2008-2011 and 84 available reference duck AIVs from the Atlantic flyway from 2006-2011. A vast diversity of viral genes and genomes was identified in the 109 viruses. The genetic structure differed amongst the 8 viral segments with predominant single lineages found for the PB2, PB1 and M segments, increased diversity found for the PA, NP and NS segments (2, 3 and 3 lineages, respectively), and the highest diversity found for the HA and NA segments (12 and 9 lineages, respectively). Identification of inter-hemispheric transmissions was rare with only 2% of the genes of Eurasian origin. Virus transmission between ducks and other bird groups was investigated, with 57.3% of the genes having highly similar (≥99% nucleotide identity) genes detected in birds other than ducks. Transmission between North American flyways has been frequent and 75.8% of the genes were highly similar to genes found in other North American flyways. However, the duck AIV genes did display spatial distribution bias, which was demonstrated by the different population sizes of specific viral genes in one or two neighbouring flyways compared to more distant flyways. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24498009</PMID><DateCompleted><Year>2014</Year><Month>12</Month><Day>22</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>1</Issue><PubDate><Year>2014</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS ONE</ISOAbbreviation></Journal><ArticleTitle>Genetic structure of avian influenza viruses from ducks of the Atlantic flyway of North America.</ArticleTitle><Pagination><MedlinePgn>e86999</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0086999</ELocationID><Abstract><AbstractText>Wild birds, including waterfowl such as ducks, are reservoir hosts of influenza A viruses. Despite the increased number of avian influenza virus (AIV) genome sequences available, our understanding of AIV genetic structure and transmission through space and time in waterfowl in North America is still limited. In particular, AIVs in ducks of the Atlantic flyway of North America have not been thoroughly investigated. To begin to address this gap, we analyzed 109 AIV genome sequences from ducks in the Atlantic flyway to determine their genetic structure and to document the extent of gene flow in the context of sequences from other locations and other avian and mammalian host groups. The analyses included 25 AIVs from ducks from Newfoundland, Canada, from 2008-2011 and 84 available reference duck AIVs from the Atlantic flyway from 2006-2011. A vast diversity of viral genes and genomes was identified in the 109 viruses. The genetic structure differed amongst the 8 viral segments with predominant single lineages found for the PB2, PB1 and M segments, increased diversity found for the PA, NP and NS segments (2, 3 and 3 lineages, respectively), and the highest diversity found for the HA and NA segments (12 and 9 lineages, respectively). Identification of inter-hemispheric transmissions was rare with only 2% of the genes of Eurasian origin. Virus transmission between ducks and other bird groups was investigated, with 57.3% of the genes having highly similar (≥99% nucleotide identity) genes detected in birds other than ducks. Transmission between North American flyways has been frequent and 75.8% of the genes were highly similar to genes found in other North American flyways. However, the duck AIV genes did display spatial distribution bias, which was demonstrated by the different population sizes of specific viral genes in one or two neighbouring flyways compared to more distant flyways. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Huang</LastName><ForeName>Yanyan</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wille</LastName><ForeName>Michelle</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dobbin</LastName><ForeName>Ashley</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Walzthöni</LastName><ForeName>Natasha M</ForeName><Initials>NM</Initials><AffiliationInfo><Affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Robertson</LastName><ForeName>Gregory J</ForeName><Initials>GJ</Initials><AffiliationInfo><Affiliation>Wildlife Research Division, Environment Canada, Mount Pearl, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ojkic</LastName><ForeName>Davor</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Animal Health Laboratory, University of Guelph, Guelph, Ontario, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Whitney</LastName><ForeName>Hugh</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Newfoundland and Labrador Department of Natural Resources, St. John's, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lang</LastName><ForeName>Andrew S</ForeName><Initials>AS</Initials><AffiliationInfo><Affiliation>Department of Biology, Memorial University of Newfoundland, St. John's, Newfoundland and Labrador, Canada.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>01</Month><Day>30</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS One</MedlineTA><NlmUniqueID>101285081</NlmUniqueID><ISSNLinking>1932-6203</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004372" MajorTopicYN="N">Ducks</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D051456" MajorTopicYN="N">Gene Flow</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005814" MajorTopicYN="N">Genes, Viral</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014644" MajorTopicYN="N">Genetic Variation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009980" MajorTopicYN="N">Influenza A virus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005585" MajorTopicYN="N">Influenza in Birds</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D009523" MajorTopicYN="N" Type="Geographic">Newfoundland and Labrador</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>10</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2013</Year><Month>12</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>2</Month><Day>6</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>2</Month><Day>6</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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IdType="pubmed">17942553</ArticleId></ArticleIdList></Reference><Reference><Citation>Microbiol Rev. 1992 Mar;56(1):152-79</Citation><ArticleIdList><ArticleId IdType="pubmed">1579108</ArticleId></ArticleIdList></Reference><Reference><Citation>Can J Microbiol. 2013 Oct;59(10):701-8</Citation><ArticleIdList><ArticleId IdType="pubmed">24102224</ArticleId></ArticleIdList></Reference><Reference><Citation>Ecol Lett. 2012 Jan;15(1):24-33</Citation><ArticleIdList><ArticleId IdType="pubmed">22008513</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Virol. 1995;140(7):1163-72</Citation><ArticleIdList><ArticleId IdType="pubmed">7646350</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Pathog. 2008 May;4(5):e1000076</Citation><ArticleIdList><ArticleId IdType="pubmed">18516303</ArticleId></ArticleIdList></Reference><Reference><Citation>J Gen Virol. 1999 Dec;80 ( Pt 12):3167-71</Citation><ArticleIdList><ArticleId IdType="pubmed">10567648</ArticleId></ArticleIdList></Reference><Reference><Citation>Infect Genet Evol. 2011 Dec;11(8):2004-10</Citation><ArticleIdList><ArticleId IdType="pubmed">21964597</ArticleId></ArticleIdList></Reference><Reference><Citation>J Gen Virol. 2008 Feb;89(Pt 2):509-19</Citation><ArticleIdList><ArticleId IdType="pubmed">18198382</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013;8(11):e81842</Citation><ArticleIdList><ArticleId IdType="pubmed">24312367</ArticleId></ArticleIdList></Reference><Reference><Citation>Virus Res. 2005 Dec;114(1-2):89-100</Citation><ArticleIdList><ArticleId IdType="pubmed">16039745</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2007;2(2):e261</Citation><ArticleIdList><ArticleId IdType="pubmed">17330144</ArticleId></ArticleIdList></Reference><Reference><Citation>Evol Appl. 2009 Nov;2(4):457-68</Citation><ArticleIdList><ArticleId IdType="pubmed">25567891</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2011 Oct;28(10):2731-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21546353</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2006 Dec;23(12):2336-41</Citation><ArticleIdList><ArticleId IdType="pubmed">16945980</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2006 Apr 21;312(5772):384-8</Citation><ArticleIdList><ArticleId IdType="pubmed">16627734</ArticleId></ArticleIdList></Reference><Reference><Citation>Intervirology. 1979;11(1):66-8</Citation><ArticleIdList><ArticleId IdType="pubmed">429143</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2011 Jul;77(14):4981-5</Citation><ArticleIdList><ArticleId IdType="pubmed">21622783</ArticleId></ArticleIdList></Reference><Reference><Citation>Virol J. 2013;10:179</Citation><ArticleIdList><ArticleId IdType="pubmed">23742717</ArticleId></ArticleIdList></Reference><Reference><Citation>Emerg Infect Dis. 2009 Jul;15(7):1040-5</Citation><ArticleIdList><ArticleId IdType="pubmed">19624918</ArticleId></ArticleIdList></Reference><Reference><Citation>Virus Genes. 2012 Jun;44(3):415-28</Citation><ArticleIdList><ArticleId IdType="pubmed">22222690</ArticleId></ArticleIdList></Reference><Reference><Citation>Virology. 2008 Sep 1;378(2):363-70</Citation><ArticleIdList><ArticleId IdType="pubmed">18632129</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2011;6(6):e20664</Citation><ArticleIdList><ArticleId IdType="pubmed">21697989</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2006 Mar 17;311(5767):1576-80</Citation><ArticleIdList><ArticleId IdType="pubmed">16439620</ArticleId></ArticleIdList></Reference><Reference><Citation>Virology. 2009 Jan 5;383(1):156-61</Citation><ArticleIdList><ArticleId IdType="pubmed">19000628</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Virol. 2001 Dec;146(12):2275-89</Citation><ArticleIdList><ArticleId IdType="pubmed">11811679</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Pathog. 2013;9(8):e1003570</Citation><ArticleIdList><ArticleId IdType="pubmed">24009503</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2008 Nov;17(21):4754-62</Citation><ArticleIdList><ArticleId IdType="pubmed">19140989</ArticleId></ArticleIdList></Reference><Reference><Citation>J Gen Virol. 2004 Aug;85(Pt 8):2327-37</Citation><ArticleIdList><ArticleId IdType="pubmed">15269374</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Virol. 2011 Jan;156(1):107-15</Citation><ArticleIdList><ArticleId IdType="pubmed">21053031</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol Methods. 2004 Dec 1;122(1):119-22</Citation><ArticleIdList><ArticleId IdType="pubmed">15488629</ArticleId></ArticleIdList></Reference><Reference><Citation>Virology. 2010 Jun 5;401(2):179-89</Citation><ArticleIdList><ArticleId IdType="pubmed">20227102</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Virol. 2012 Aug;157(8):1509-22</Citation><ArticleIdList><ArticleId IdType="pubmed">22580556</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Pathog. 2007 Nov;3(11):e167</Citation><ArticleIdList><ArticleId IdType="pubmed">17997603</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2011 Mar;20(5):1015-25</Citation><ArticleIdList><ArticleId IdType="pubmed">21073586</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Biol Sci. 2012 Oct 7;279(1744):3967-75</Citation><ArticleIdList><ArticleId IdType="pubmed">22859590</ArticleId></ArticleIdList></Reference><Reference><Citation>Virology. 2010 Oct 25;406(2):352-9</Citation><ArticleIdList><ArticleId IdType="pubmed">20709346</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(2):e31471</Citation><ArticleIdList><ArticleId IdType="pubmed">22328934</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol Methods. 2006 Sep;136(1-2):38-43</Citation><ArticleIdList><ArticleId IdType="pubmed">16687177</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 1997 Sep 1;25(17):3389-402</Citation><ArticleIdList><ArticleId IdType="pubmed">9254694</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2007 Jul;35(Web Server issue):W275-9</Citation><ArticleIdList><ArticleId IdType="pubmed">17537820</ArticleId></ArticleIdList></Reference><Reference><Citation>Infect Genet Evol. 2009 Sep;9(5):800-5</Citation><ArticleIdList><ArticleId IdType="pubmed">19379841</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Canada</li></country></list><tree><country name="Canada"><noRegion><name sortKey="Huang, Yanyan" sort="Huang, Yanyan" uniqKey="Huang Y" first="Yanyan" last="Huang">Yanyan Huang</name></noRegion><name sortKey="Dobbin, Ashley" sort="Dobbin, Ashley" uniqKey="Dobbin A" first="Ashley" last="Dobbin">Ashley Dobbin</name><name sortKey="Lang, Andrew S" sort="Lang, Andrew S" uniqKey="Lang A" first="Andrew S" last="Lang">Andrew S. Lang</name><name sortKey="Ojkic, Davor" sort="Ojkic, Davor" uniqKey="Ojkic D" first="Davor" last="Ojkic">Davor Ojkic</name><name sortKey="Robertson, Gregory J" sort="Robertson, Gregory J" uniqKey="Robertson G" first="Gregory J" last="Robertson">Gregory J. Robertson</name><name sortKey="Walzthoni, Natasha M" sort="Walzthoni, Natasha M" uniqKey="Walzthoni N" first="Natasha M" last="Walzthöni">Natasha M. Walzthöni</name><name sortKey="Whitney, Hugh" sort="Whitney, Hugh" uniqKey="Whitney H" first="Hugh" last="Whitney">Hugh Whitney</name><name sortKey="Wille, Michelle" sort="Wille, Michelle" uniqKey="Wille M" first="Michelle" last="Wille">Michelle Wille</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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