GrippeCanadaV2, Main, Exploration, bibRecordById, pubmed:30873724

Respiratory viruses identified in western Canadian beef cattle by metagenomic sequencing and their association with bovine respiratory disease.

Identifieur interne : 000007 ( Main/Exploration ); précédent : 000006; suivant : 000008

Respiratory viruses identified in western Canadian beef cattle by metagenomic sequencing and their association with bovine respiratory disease.

Auteurs : Maodong Zhang [Canada] ; Janet E. Hill [Canada] ; Champika Fernando [Canada] ; Trevor W. Alexander [Canada] ; Edouard Timsit [Canada] ; Frank Van Der Meer [Canada] ; Yanyun Huang [Canada]

Source :

Transboundary and emerging diseases [ 1865-1682 ] ; 2019.

RBID : pubmed:30873724

Descripteurs français

KwdFr :
- Animaux, Aphthovirus (génétique), Bovins, Canada (épidémiologie), Coronavirus bovin (génétique), Génome viral (génétique), Infections de l'appareil respiratoire (médecine vétérinaire), Infections de l'appareil respiratoire (virologie), Infections de l'appareil respiratoire (épidémiologie), Infections à virus à ARN (médecine vétérinaire), Infections à virus à ARN (virologie), Infections à virus à ARN (épidémiologie), Maladies des bovins (virologie), Maladies des bovins (épidémiologie), Métagénomique, Thogotovirus (génétique), Virus respiratoire syncytial bovin (génétique), Virus à ARN (génétique).
MESH :
- génétique : Aphthovirus, Coronavirus bovin, Génome viral, Thogotovirus, Virus respiratoire syncytial bovin, Virus à ARN.
- médecine vétérinaire : Infections de l'appareil respiratoire, Infections à virus à ARN.
- virologie : Infections de l'appareil respiratoire, Infections à virus à ARN, Maladies des bovins.
- épidémiologie : Canada, Infections de l'appareil respiratoire, Infections à virus à ARN, Maladies des bovins.
- Animaux, Bovins, Métagénomique.
Wicri :
- geographic : Canada.

English descriptors

KwdEn :
- Animals, Aphthovirus (genetics), Canada (epidemiology), Cattle, Cattle Diseases (epidemiology), Cattle Diseases (virology), Coronavirus, Bovine (genetics), Genome, Viral (genetics), Metagenomics, RNA Virus Infections (epidemiology), RNA Virus Infections (veterinary), RNA Virus Infections (virology), RNA Viruses (genetics), Respiratory Syncytial Virus, Bovine (genetics), Respiratory Tract Infections (epidemiology), Respiratory Tract Infections (veterinary), Respiratory Tract Infections (virology), Thogotovirus (genetics).
MESH :
- geographic , epidemiology : Canada.
- epidemiology : Cattle Diseases, RNA Virus Infections, Respiratory Tract Infections.
- genetics : Aphthovirus, Coronavirus, Bovine, Genome, Viral, RNA Viruses, Respiratory Syncytial Virus, Bovine, Thogotovirus.
- veterinary : RNA Virus Infections, Respiratory Tract Infections.
- virology : Cattle Diseases, RNA Virus Infections, Respiratory Tract Infections.
- Animals, Cattle, Metagenomics.

Abstract

Bovine respiratory disease (BRD) causes considerable economic losses in North America. The pathogenesis involves interactions between bacteria, viruses, environment and management factors. Primary viral infection can increase the risk of secondary fatal bacterial infection. The objective of this study was to use metagenomic sequencing to characterize the respiratory viromes of paired nasal swabs and tracheal washes from western Canadian feedlot cattle, with or without BRD. A total of 116 cattle (116 nasal swabs and 116 tracheal washes) were analysed. The presence of influenza D virus (IDV), bovine rhinitis A virus (BRAV), bovine rhinitis B virus (BRBV), bovine coronavirus (BCV) and bovine respiratory syncytial virus (BRSV) was associated with BRD. Agreement between identification of viruses in nasal swabs and tracheal washes was generally weak, indicating that sampling location may affect detection of infection. This study reported several viruses for the first time in Canada and provides a basis for further studies investigating candidate viruses important to the prevention of BRD.

DOI: 10.1111/tbed.13172
PubMed: 30873724

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000018
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Le document en format XML

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<front><div type="abstract" xml:lang="en">Bovine respiratory disease (BRD) causes considerable economic losses in North America. The pathogenesis involves interactions between bacteria, viruses, environment and management factors. Primary viral infection can increase the risk of secondary fatal bacterial infection. The objective of this study was to use metagenomic sequencing to characterize the respiratory viromes of paired nasal swabs and tracheal washes from western Canadian feedlot cattle, with or without BRD. A total of 116 cattle (116 nasal swabs and 116 tracheal washes) were analysed. The presence of influenza D virus (IDV), bovine rhinitis A virus (BRAV), bovine rhinitis B virus (BRBV), bovine coronavirus (BCV) and bovine respiratory syncytial virus (BRSV) was associated with BRD. Agreement between identification of viruses in nasal swabs and tracheal washes was generally weak, indicating that sampling location may affect detection of infection. This study reported several viruses for the first time in Canada and provides a basis for further studies investigating candidate viruses important to the prevention of BRD.</div>
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<Title>Transboundary and emerging diseases</Title>
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<ArticleTitle>Respiratory viruses identified in western Canadian beef cattle by metagenomic sequencing and their association with bovine respiratory disease.</ArticleTitle>
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<Abstract><AbstractText>Bovine respiratory disease (BRD) causes considerable economic losses in North America. The pathogenesis involves interactions between bacteria, viruses, environment and management factors. Primary viral infection can increase the risk of secondary fatal bacterial infection. The objective of this study was to use metagenomic sequencing to characterize the respiratory viromes of paired nasal swabs and tracheal washes from western Canadian feedlot cattle, with or without BRD. A total of 116 cattle (116 nasal swabs and 116 tracheal washes) were analysed. The presence of influenza D virus (IDV), bovine rhinitis A virus (BRAV), bovine rhinitis B virus (BRBV), bovine coronavirus (BCV) and bovine respiratory syncytial virus (BRSV) was associated with BRD. Agreement between identification of viruses in nasal swabs and tracheal washes was generally weak, indicating that sampling location may affect detection of infection. This study reported several viruses for the first time in Canada and provides a basis for further studies investigating candidate viruses important to the prevention of BRD.</AbstractText>
<CopyrightInformation>© 2019 Blackwell Verlag GmbH.</CopyrightInformation>
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<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Maodong</ForeName>
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<AffiliationInfo><Affiliation>Simpson Ranch Chair in Beef Cattle Health and Wellness, University of Calgary, Calgary, AB, Canada.</Affiliation>
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<Country></Country>
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<Grant><Agency>Alberta Livestock and Meat Agency Ltd., and Genome Alberta</Agency>
<Country></Country>
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Respiratory viruses identified in western Canadian beef cattle by metagenomic sequencing and their association with bovine respiratory disease.

Respiratory viruses identified in western Canadian beef cattle by metagenomic sequencing and their association with bovine respiratory disease.

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