Serveur d'exploration Covid (26 mars)

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Identification of an infectious bronchitis coronavirus strain exhibiting a classical genotype but altered antigenicity, pathogenicity, and innate immunity profile

Identifieur interne : 000330 ( Pmc/Curation ); précédent : 000329; suivant : 000331

Identification of an infectious bronchitis coronavirus strain exhibiting a classical genotype but altered antigenicity, pathogenicity, and innate immunity profile

Auteurs : Shu-Yi Lin [Taïwan] ; Yao-Tsun Li [Taïwan] ; You-Ting Chen [Taïwan] ; Ting-Chih Chen [Taïwan] ; Che-Ming J. Hu [Taïwan] ; Hui-Wen Chen [Taïwan]

Source :

RBID : PMC:5120290

Abstract

Avian coronavirus infectious bronchitis virus (IBV) poses economic threat to the poultry industry worldwide. Pathogenic IBV 3575/08 was isolated from broilers vaccinated with the attenuated viral vaccine derived from a Taiwan strain 2575/98. In this study, extensive investigations were conducted on the genome sequences, antigenicity, pathogenicity, and host immune responses of several IBV strains in specific-pathogen-free chickens. Sequence analyses revealed that 3575/08 and 2575/98 shared high homology in their structural genes, but not in non-structural accessory proteins such as 3a, 3b and 5b. Despite a high degree of homology in their spike protein genes, cross neutralization test showed low cross protection between 3575/08 and 2575/98, suggesting distinct antigenicity for the two strains. Animal challenge experiments exhibited strong respiratory and renal pathogenicity for 3575/08. In addition, early and prolonged viral shedding and rapid viral dissemination were observed. Immune gene expression profiling by PCR array showed chickens infected with 3575/08 had delayed expression of a subset of early innate immune genes, whereas chickens infected with the wild-type or attenuated-type 2575/08 revealed quick gene induction and efficient virus control. In summary, this study reveals a new IBV strain, which harbors a known local genotype but displays remarkably altered antigenicity, pathogenicity and host defenses.

Electronic supplementary material

The online version of this article (doi:10.1038/srep37725) contains supplementary material, which is available to authorized users.


Url:
DOI: 10.1038/srep37725
PubMed: 27876864
PubMed Central: 5120290

Links toward previous steps (curation, corpus...)


Links to Exploration step

PMC:5120290

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Identification of an infectious bronchitis coronavirus strain exhibiting a classical genotype but altered antigenicity, pathogenicity, and innate immunity profile</title>
<author>
<name sortKey="Lin, Shu Yi" sort="Lin, Shu Yi" uniqKey="Lin S" first="Shu-Yi" last="Lin">Shu-Yi Lin</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Li, Yao Tsun" sort="Li, Yao Tsun" uniqKey="Li Y" first="Yao-Tsun" last="Li">Yao-Tsun Li</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Chen, You Ting" sort="Chen, You Ting" uniqKey="Chen Y" first="You-Ting" last="Chen">You-Ting Chen</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Chen, Ting Chih" sort="Chen, Ting Chih" uniqKey="Chen T" first="Ting-Chih" last="Chen">Ting-Chih Chen</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Hu, Che Ming J" sort="Hu, Che Ming J" uniqKey="Hu C" first="Che-Ming J." last="Hu">Che-Ming J. Hu</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff2">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.482251.8</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0633 7958</institution-id>
<institution>Institute of Biomedical Sciences, Academia Sinica,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="Aff3">Research Center for Nanotechnology and Infectious Diseases, Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Research Center for Nanotechnology and Infectious Diseases, Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Chen, Hui Wen" sort="Chen, Hui Wen" uniqKey="Chen H" first="Hui-Wen" last="Chen">Hui-Wen Chen</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="Aff3">Research Center for Nanotechnology and Infectious Diseases, Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Research Center for Nanotechnology and Infectious Diseases, Taipei</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">27876864</idno>
<idno type="pmc">5120290</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120290</idno>
<idno type="RBID">PMC:5120290</idno>
<idno type="doi">10.1038/srep37725</idno>
<date when="2016">2016</date>
<idno type="wicri:Area/Pmc/Corpus">000330</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000330</idno>
<idno type="wicri:Area/Pmc/Curation">000330</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000330</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Identification of an infectious bronchitis coronavirus strain exhibiting a classical genotype but altered antigenicity, pathogenicity, and innate immunity profile</title>
<author>
<name sortKey="Lin, Shu Yi" sort="Lin, Shu Yi" uniqKey="Lin S" first="Shu-Yi" last="Lin">Shu-Yi Lin</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Li, Yao Tsun" sort="Li, Yao Tsun" uniqKey="Li Y" first="Yao-Tsun" last="Li">Yao-Tsun Li</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Chen, You Ting" sort="Chen, You Ting" uniqKey="Chen Y" first="You-Ting" last="Chen">You-Ting Chen</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Chen, Ting Chih" sort="Chen, Ting Chih" uniqKey="Chen T" first="Ting-Chih" last="Chen">Ting-Chih Chen</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Hu, Che Ming J" sort="Hu, Che Ming J" uniqKey="Hu C" first="Che-Ming J." last="Hu">Che-Ming J. Hu</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff2">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.482251.8</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0633 7958</institution-id>
<institution>Institute of Biomedical Sciences, Academia Sinica,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="Aff3">Research Center for Nanotechnology and Infectious Diseases, Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Research Center for Nanotechnology and Infectious Diseases, Taipei</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Chen, Hui Wen" sort="Chen, Hui Wen" uniqKey="Chen H" first="Hui-Wen" last="Chen">Hui-Wen Chen</name>
<affiliation wicri:level="1">
<nlm:aff id="Aff1">
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Taipei</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="Aff3">Research Center for Nanotechnology and Infectious Diseases, Taipei, Taiwan</nlm:aff>
<country xml:lang="fr">Taïwan</country>
<wicri:regionArea>Research Center for Nanotechnology and Infectious Diseases, Taipei</wicri:regionArea>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Scientific Reports</title>
<idno type="eISSN">2045-2322</idno>
<imprint>
<date when="2016">2016</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p>Avian coronavirus infectious bronchitis virus (IBV) poses economic threat to the poultry industry worldwide. Pathogenic IBV 3575/08 was isolated from broilers vaccinated with the attenuated viral vaccine derived from a Taiwan strain 2575/98. In this study, extensive investigations were conducted on the genome sequences, antigenicity, pathogenicity, and host immune responses of several IBV strains in specific-pathogen-free chickens. Sequence analyses revealed that 3575/08 and 2575/98 shared high homology in their structural genes, but not in non-structural accessory proteins such as 3a, 3b and 5b. Despite a high degree of homology in their spike protein genes, cross neutralization test showed low cross protection between 3575/08 and 2575/98, suggesting distinct antigenicity for the two strains. Animal challenge experiments exhibited strong respiratory and renal pathogenicity for 3575/08. In addition, early and prolonged viral shedding and rapid viral dissemination were observed. Immune gene expression profiling by PCR array showed chickens infected with 3575/08 had delayed expression of a subset of early innate immune genes, whereas chickens infected with the wild-type or attenuated-type 2575/08 revealed quick gene induction and efficient virus control. In summary, this study reveals a new IBV strain, which harbors a known local genotype but displays remarkably altered antigenicity, pathogenicity and host defenses.</p>
<sec>
<title>Electronic supplementary material</title>
<p>The online version of this article (doi:10.1038/srep37725) contains supplementary material, which is available to authorized users.</p>
</sec>
</div>
</front>
<back>
<div1 type="bibliography">
<listBibl>
<biblStruct>
<analytic>
<author>
<name sortKey="Cook, Jk" uniqKey="Cook J">JK Cook</name>
</author>
<author>
<name sortKey="Jackwood, M" uniqKey="Jackwood M">M Jackwood</name>
</author>
<author>
<name sortKey="Jones, Rc" uniqKey="Jones R">RC Jones</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Jackwood, Mw" uniqKey="Jackwood M">MW Jackwood</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Sjaak De Wit, Jj" uniqKey="Sjaak De Wit J">JJ Sjaak de Wit</name>
</author>
<author>
<name sortKey="Cook, Jk" uniqKey="Cook J">JK Cook</name>
</author>
<author>
<name sortKey="Van Der Heijden, Hm" uniqKey="Van Der Heijden H">HM van der Heijden</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Jackwood, Mw" uniqKey="Jackwood M">MW Jackwood</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Feng, J" uniqKey="Feng J">J Feng</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Chen, Hw" uniqKey="Chen H">HW Chen</name>
</author>
<author>
<name sortKey="Huang, Yp" uniqKey="Huang Y">YP Huang</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Huang, Yp" uniqKey="Huang Y">YP Huang</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Lin, Ky" uniqKey="Lin K">KY Lin</name>
</author>
<author>
<name sortKey="Wang, Hc" uniqKey="Wang H">HC Wang</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
<author>
<name sortKey="Tsai, Ct" uniqKey="Tsai C">CT Tsai</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Huang, Yp" uniqKey="Huang Y">YP Huang</name>
</author>
<author>
<name sortKey="Lee, Hc" uniqKey="Lee H">HC Lee</name>
</author>
<author>
<name sortKey="Cheng, Mc" uniqKey="Cheng M">MC Cheng</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Xu, G" uniqKey="Xu G">G Xu</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Xu, Q" uniqKey="Xu Q">Q Xu</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Ma, H" uniqKey="Ma H">H Ma</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Barber, Gn" uniqKey="Barber G">GN Barber</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Barber, Mr" uniqKey="Barber M">MR Barber</name>
</author>
<author>
<name sortKey="Aldridge, Jr" uniqKey="Aldridge J">JR Aldridge</name>
</author>
<author>
<name sortKey="Webster, Rg" uniqKey="Webster R">RG Webster</name>
</author>
<author>
<name sortKey="Magor, Ke" uniqKey="Magor K">KE Magor</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Chen, S" uniqKey="Chen S">S Chen</name>
</author>
<author>
<name sortKey="Cheng, A" uniqKey="Cheng A">A Cheng</name>
</author>
<author>
<name sortKey="Wang, M" uniqKey="Wang M">M Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Alexopoulou, L" uniqKey="Alexopoulou L">L Alexopoulou</name>
</author>
<author>
<name sortKey="Holt, Ac" uniqKey="Holt A">AC Holt</name>
</author>
<author>
<name sortKey="Medzhitov, R" uniqKey="Medzhitov R">R Medzhitov</name>
</author>
<author>
<name sortKey="Flavell, Ra" uniqKey="Flavell R">RA Flavell</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Cong, F" uniqKey="Cong F">F Cong</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="He, Y" uniqKey="He Y">Y He</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Dar, A" uniqKey="Dar A">A Dar</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Huang, Yp" uniqKey="Huang Y">YP Huang</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
<author>
<name sortKey="Hsieh, Mc" uniqKey="Hsieh M">MC Hsieh</name>
</author>
<author>
<name sortKey="Chang, Pc" uniqKey="Chang P">PC Chang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
<author>
<name sortKey="Huang, Yc" uniqKey="Huang Y">YC Huang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kant, A" uniqKey="Kant A">A Kant</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name>
</author>
<author>
<name sortKey="Elus, Mm" uniqKey="Elus M">MM Elus</name>
</author>
<author>
<name sortKey="Cook, Jk" uniqKey="Cook J">JK Cook</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Callison, Sa" uniqKey="Callison S">SA Callison</name>
</author>
<author>
<name sortKey="Jackwood, Mw" uniqKey="Jackwood M">MW Jackwood</name>
</author>
<author>
<name sortKey="Hilt, Da" uniqKey="Hilt D">DA Hilt</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Grosse, B" uniqKey="Grosse B">B Grosse</name>
</author>
<author>
<name sortKey="Siddell, Sg" uniqKey="Siddell S">SG Siddell</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Casais, R" uniqKey="Casais R">R Casais</name>
</author>
<author>
<name sortKey="Dove, B" uniqKey="Dove B">B Dove</name>
</author>
<author>
<name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name>
</author>
<author>
<name sortKey="Britton, P" uniqKey="Britton P">P Britton</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Otsuki, K" uniqKey="Otsuki K">K Otsuki</name>
</author>
<author>
<name sortKey="Nakamura, T" uniqKey="Nakamura T">T Nakamura</name>
</author>
<author>
<name sortKey="Kubota, N" uniqKey="Kubota N">N Kubota</name>
</author>
<author>
<name sortKey="Kawaoka, Y" uniqKey="Kawaoka Y">Y Kawaoka</name>
</author>
<author>
<name sortKey="Tsubokura, M" uniqKey="Tsubokura M">M Tsubokura</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Rose, Km" uniqKey="Rose K">KM Rose</name>
</author>
<author>
<name sortKey="Elliott, R" uniqKey="Elliott R">R Elliott</name>
</author>
<author>
<name sortKey="Martinez Sobrido, L" uniqKey="Martinez Sobrido L">L Martínez-Sobrido</name>
</author>
<author>
<name sortKey="Garcia Sastre, A" uniqKey="Garcia Sastre A">A García-Sastre</name>
</author>
<author>
<name sortKey="Weiss, Sr" uniqKey="Weiss S">SR Weiss</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Devaraj, Sg" uniqKey="Devaraj S">SG Devaraj</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Versteeg, Ga" uniqKey="Versteeg G">GA Versteeg</name>
</author>
<author>
<name sortKey="Bredenbeek, Pj" uniqKey="Bredenbeek P">PJ Bredenbeek</name>
</author>
<author>
<name sortKey="Van Den Worm, Sh" uniqKey="Van Den Worm S">SH van den Worm</name>
</author>
<author>
<name sortKey="Spaan, Wj" uniqKey="Spaan W">WJ Spaan</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kint, J" uniqKey="Kint J">J Kint</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Hodgson, T" uniqKey="Hodgson T">T Hodgson</name>
</author>
<author>
<name sortKey="Britton, P" uniqKey="Britton P">P Britton</name>
</author>
<author>
<name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kint, J" uniqKey="Kint J">J Kint</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kint, J" uniqKey="Kint J">J Kint</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Han, Z" uniqKey="Han Z">Z Han</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Wang, Y" uniqKey="Wang Y">Y Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Becares, M" uniqKey="Becares M">M Becares</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kamitani, W" uniqKey="Kamitani W">W Kamitani</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kameka, Am" uniqKey="Kameka A">AM Kameka</name>
</author>
<author>
<name sortKey="Haddadi, S" uniqKey="Haddadi S">S Haddadi</name>
</author>
<author>
<name sortKey="Kim, Ds" uniqKey="Kim D">DS Kim</name>
</author>
<author>
<name sortKey="Cork, Sc" uniqKey="Cork S">SC Cork</name>
</author>
<author>
<name sortKey="Abdul Careem, Mf" uniqKey="Abdul Careem M">MF Abdul-Careem</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Menachery, Vd" uniqKey="Menachery V">VD Menachery</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Zalinger, Zb" uniqKey="Zalinger Z">ZB Zalinger</name>
</author>
<author>
<name sortKey="Elliott, R" uniqKey="Elliott R">R Elliott</name>
</author>
<author>
<name sortKey="Rose, Km" uniqKey="Rose K">KM Rose</name>
</author>
<author>
<name sortKey="Weiss, Sr" uniqKey="Weiss S">SR Weiss</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Okabayashi, T" uniqKey="Okabayashi T">T Okabayashi</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Chen, Hw" uniqKey="Chen H">HW Chen</name>
</author>
<author>
<name sortKey="Huang, Yp" uniqKey="Huang Y">YP Huang</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Chen, Hw" uniqKey="Chen H">HW Chen</name>
</author>
<author>
<name sortKey="Wang, Ch" uniqKey="Wang C">CH Wang</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Reed, Lj" uniqKey="Reed L">LJ Reed</name>
</author>
<author>
<name sortKey="Muench, H" uniqKey="Muench H">H Muench</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name>
</author>
<author>
<name sortKey="Dudley, J" uniqKey="Dudley J">J Dudley</name>
</author>
<author>
<name sortKey="Nei, M" uniqKey="Nei M">M Nei</name>
</author>
<author>
<name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Archetti, I" uniqKey="Archetti I">I Archetti</name>
</author>
<author>
<name sortKey="Horsfall, Fl" uniqKey="Horsfall F">FL Horsfall</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Choi, Ks" uniqKey="Choi K">KS Choi</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Avellaneda, Ge" uniqKey="Avellaneda G">GE Avellaneda</name>
</author>
<author>
<name sortKey="Villegas, P" uniqKey="Villegas P">P Villegas</name>
</author>
<author>
<name sortKey="Jackwood, Mw" uniqKey="Jackwood M">MW Jackwood</name>
</author>
<author>
<name sortKey="King, Dj" uniqKey="King D">DJ King</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Kapczynski, Dr" uniqKey="Kapczynski D">DR Kapczynski</name>
</author>
<author>
<name sortKey="Jiang, Hj" uniqKey="Jiang H">HJ Jiang</name>
</author>
<author>
<name sortKey="Kogut, Mh" uniqKey="Kogut M">MH Kogut</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Livak, Kj" uniqKey="Livak K">KJ Livak</name>
</author>
<author>
<name sortKey="Schmittgen, Td" uniqKey="Schmittgen T">TD Schmittgen</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<pmc article-type="research-article">
<pmc-dir>properties open_access</pmc-dir>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Sci Rep</journal-id>
<journal-id journal-id-type="iso-abbrev">Sci Rep</journal-id>
<journal-title-group>
<journal-title>Scientific Reports</journal-title>
</journal-title-group>
<issn pub-type="epub">2045-2322</issn>
<publisher>
<publisher-name>Nature Publishing Group UK</publisher-name>
<publisher-loc>London</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="pmid">27876864</article-id>
<article-id pub-id-type="pmc">5120290</article-id>
<article-id pub-id-type="publisher-id">BFsrep37725</article-id>
<article-id pub-id-type="doi">10.1038/srep37725</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Article</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Identification of an infectious bronchitis coronavirus strain exhibiting a classical genotype but altered antigenicity, pathogenicity, and innate immunity profile</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Lin</surname>
<given-names>Shu-Yi</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Yao-Tsun</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>You-Ting</given-names>
</name>
<address>
<email>winnichen@ntu.edu.tw</email>
</address>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Ting-Chih</given-names>
</name>
<address>
<email>winnichen@ntu.edu.tw</email>
</address>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Hu</surname>
<given-names>Che-Ming J.</given-names>
</name>
<xref ref-type="aff" rid="Aff2">2</xref>
<xref ref-type="aff" rid="Aff3">3</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Hui-Wen</given-names>
</name>
<address>
<email>winnichen@ntu.edu.tw</email>
</address>
<xref ref-type="aff" rid="Aff1">1</xref>
<xref ref-type="aff" rid="Aff3">3</xref>
</contrib>
<aff id="Aff1">
<label>1</label>
<institution-wrap>
<institution-id institution-id-type="GRID">grid.19188.39</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0546 0241</institution-id>
<institution>Department of Veterinary Medicine,</institution>
<institution>National Taiwan University,</institution>
</institution-wrap>
Taipei, Taiwan</aff>
<aff id="Aff2">
<label>2</label>
<institution-wrap>
<institution-id institution-id-type="GRID">grid.482251.8</institution-id>
<institution-id institution-id-type="ISNI">0000 0004 0633 7958</institution-id>
<institution>Institute of Biomedical Sciences, Academia Sinica,</institution>
</institution-wrap>
Taipei, Taiwan</aff>
<aff id="Aff3">
<label>3</label>
Research Center for Nanotechnology and Infectious Diseases, Taipei, Taiwan</aff>
</contrib-group>
<pub-date pub-type="epub">
<day>23</day>
<month>11</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="pmc-release">
<day>23</day>
<month>11</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="collection">
<year>2016</year>
</pub-date>
<volume>6</volume>
<elocation-id>37725</elocation-id>
<history>
<date date-type="received">
<day>24</day>
<month>8</month>
<year>2016</year>
</date>
<date date-type="accepted">
<day>31</day>
<month>10</month>
<year>2016</year>
</date>
</history>
<permissions>
<copyright-statement>© The Author(s) 2016</copyright-statement>
<license license-type="OpenAccess">
<license-p>This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit
<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</ext-link>
</license-p>
</license>
</permissions>
<abstract id="Abs1">
<p>Avian coronavirus infectious bronchitis virus (IBV) poses economic threat to the poultry industry worldwide. Pathogenic IBV 3575/08 was isolated from broilers vaccinated with the attenuated viral vaccine derived from a Taiwan strain 2575/98. In this study, extensive investigations were conducted on the genome sequences, antigenicity, pathogenicity, and host immune responses of several IBV strains in specific-pathogen-free chickens. Sequence analyses revealed that 3575/08 and 2575/98 shared high homology in their structural genes, but not in non-structural accessory proteins such as 3a, 3b and 5b. Despite a high degree of homology in their spike protein genes, cross neutralization test showed low cross protection between 3575/08 and 2575/98, suggesting distinct antigenicity for the two strains. Animal challenge experiments exhibited strong respiratory and renal pathogenicity for 3575/08. In addition, early and prolonged viral shedding and rapid viral dissemination were observed. Immune gene expression profiling by PCR array showed chickens infected with 3575/08 had delayed expression of a subset of early innate immune genes, whereas chickens infected with the wild-type or attenuated-type 2575/08 revealed quick gene induction and efficient virus control. In summary, this study reveals a new IBV strain, which harbors a known local genotype but displays remarkably altered antigenicity, pathogenicity and host defenses.</p>
<sec>
<title>Electronic supplementary material</title>
<p>The online version of this article (doi:10.1038/srep37725) contains supplementary material, which is available to authorized users.</p>
</sec>
</abstract>
<kwd-group kwd-group-type="npg-subject">
<title>Subject terms</title>
<kwd>Infection</kwd>
<kwd>Viral pathogenesis</kwd>
</kwd-group>
<custom-meta-group>
<custom-meta>
<meta-name>issue-copyright-statement</meta-name>
<meta-value>© The Author(s) 2016</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
</front>
</pmc>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/CovidV2/Data/Pmc/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000330 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Pmc/Curation/biblio.hfd -nk 000330 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Sante
   |area=    CovidV2
   |flux=    Pmc
   |étape=   Curation
   |type=    RBID
   |clé=     PMC:5120290
   |texte=   Identification of an infectious bronchitis coronavirus strain exhibiting a classical genotype but altered antigenicity, pathogenicity, and innate immunity profile
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Curation/RBID.i   -Sk "pubmed:27876864" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Curation/biblio.hfd   \
       | NlmPubMed2Wicri -a CovidV2 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Sat Mar 28 17:51:24 2020. Site generation: Sun Jan 31 15:35:48 2021