Respiratory Viruses and Bacteria among Pilgrims during the 2013 Hajj
Identifieur interne : 000467 ( Ncbi/Merge ); précédent : 000466; suivant : 000468Respiratory Viruses and Bacteria among Pilgrims during the 2013 Hajj
Auteurs : Samir Benkouiten ; Rémi Charrel ; Khadidja Belhouchat ; Tassadit Drali ; Antoine Nougairede ; Nicolas Salez ; Ziad A. Memish ; Malak Al Masri ; Pierre-Edouard Fournier ; Didier Raoult ; Philippe Brouqui ; Philippe Parola ; Philippe GautretSource :
- Emerging Infectious Diseases [ 1080-6040 ] ; 2014.
Abstract
The most common pathogens detected were coronaviruses, rhinoviruses, influenza viruses, and
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DOI: 10.3201/eid2011.140600
PubMed: 25341199
PubMed Central: 4214309
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Memish</name></author><author><name sortKey="Al Masri, Malak" sort="Al Masri, Malak" uniqKey="Al Masri M" first="Malak" last="Al Masri">Malak Al Masri</name></author><author><name sortKey="Fournier, Pierre Edouard" sort="Fournier, Pierre Edouard" uniqKey="Fournier P" first="Pierre-Edouard" last="Fournier">Pierre-Edouard Fournier</name></author><author><name sortKey="Raoult, Didier" sort="Raoult, Didier" uniqKey="Raoult D" first="Didier" last="Raoult">Didier Raoult</name></author><author><name sortKey="Brouqui, Philippe" sort="Brouqui, Philippe" uniqKey="Brouqui P" first="Philippe" last="Brouqui">Philippe Brouqui</name></author><author><name sortKey="Parola, Philippe" sort="Parola, Philippe" uniqKey="Parola P" first="Philippe" last="Parola">Philippe Parola</name></author><author><name sortKey="Gautret, Philippe" sort="Gautret, Philippe" uniqKey="Gautret P" first="Philippe" last="Gautret">Philippe Gautret</name></author></analytic><series><title level="j">Emerging Infectious Diseases</title><idno type="ISSN">1080-6040</idno><idno type="eISSN">1080-6059</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The most common pathogens detected were coronaviruses, rhinoviruses, influenza viruses, and <italic>Streptococcus pneumoniae</italic>. </p></div></front><back><div1 type="bibliography"><listBibl><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct></listBibl></div1></back></TEI><pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Emerg Infect Dis</journal-id><journal-id journal-id-type="iso-abbrev">Emerging Infect. Dis</journal-id><journal-id journal-id-type="publisher-id">EID</journal-id><journal-title-group><journal-title>Emerging Infectious Diseases</journal-title></journal-title-group><issn pub-type="ppub">1080-6040</issn><issn pub-type="epub">1080-6059</issn><publisher><publisher-name>Centers for Disease Control and Prevention</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">25341199</article-id><article-id pub-id-type="pmc">4214309</article-id><article-id pub-id-type="publisher-id">14-0600</article-id><article-id pub-id-type="doi">10.3201/eid2011.140600</article-id><article-categories><subj-group subj-group-type="second-type"><subject>Expedited</subject></subj-group><subj-group subj-group-type="heading"><subject>Research</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research</subject></subj-group></article-categories><title-group><article-title>Respiratory Viruses and Bacteria among Pilgrims during the 2013 Hajj</article-title><alt-title alt-title-type="running-head">Viruses and Bacteria among Pilgrims, 2013 Hajj</alt-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Benkouiten</surname><given-names>Samir</given-names></name></contrib><contrib contrib-type="author"><name><surname>Charrel</surname><given-names>Rémi</given-names></name></contrib><contrib contrib-type="author"><name><surname>Belhouchat</surname><given-names>Khadidja</given-names></name></contrib><contrib contrib-type="author"><name><surname>Drali</surname><given-names>Tassadit</given-names></name></contrib><contrib contrib-type="author"><name><surname>Nougairede</surname><given-names>Antoine</given-names></name></contrib><contrib contrib-type="author"><name><surname>Salez</surname><given-names>Nicolas</given-names></name></contrib><contrib contrib-type="author"><name><surname>Memish</surname><given-names>Ziad A.</given-names></name></contrib><contrib contrib-type="author"><name><surname>al Masri</surname><given-names>Malak</given-names></name></contrib><contrib contrib-type="author"><name><surname>Fournier</surname><given-names>Pierre-Edouard</given-names></name></contrib><contrib contrib-type="author"><name><surname>Raoult</surname><given-names>Didier</given-names></name></contrib><contrib contrib-type="author"><name><surname>Brouqui</surname><given-names>Philippe</given-names></name></contrib><contrib contrib-type="author"><name><surname>Parola</surname><given-names>Philippe</given-names></name></contrib><contrib contrib-type="author" corresp="yes"><name><surname>Gautret</surname><given-names>Philippe</given-names></name></contrib><aff id="aff1">Aix Marseille Université, Marseille, France (S. Benkouiten, R. Charrel, K. Belhouchat, T. Drali, A. Nougairede, N. Salez, P.-E. Fournier, D. Raoult, P. Brouqui, P. Parola, P. Gautret);</aff><aff id="aff2">Institut Hospitalo-Universitaire Méditerranée, Marseille (S. Benkouiten, R. Charrel, A. Nougairede, N. Salez, P.-E. Fournier, D. Raoult, P. Brouqui, P. Parola, P. Gautret);</aff><aff id="aff3">Saudi Ministry of Health, Riyadh, Saudi Arabia (Z.A. Memish, M. al Masri);</aff><aff id="aff4">Alfaisal University College of Medicine, Riyadh (Z.A. Memish)</aff></contrib-group><author-notes><corresp id="cor1">Address for correspondence: Philippe Gautret, Centre Hospitalier Universitaire Nord, Chemin des Bourrely, 13915 Marseille, France; email: <email xlink:href="philippe.gautret@club-internet.fr">philippe.gautret@club-internet.fr</email></corresp></author-notes><pub-date pub-type="ppub"><month>11</month><year>2014</year></pub-date><volume>20</volume><issue>11</issue><fpage>1821</fpage><lpage>1827</lpage><abstract abstract-type="toc"><p>The most common pathogens detected were coronaviruses, rhinoviruses, influenza viruses, and <italic>Streptococcus pneumoniae</italic>. </p></abstract><abstract><p>Pilgrims returning from the Hajj might contribute to international spreading of respiratory pathogens. Nasal and throat swab specimens were obtained from 129 pilgrims in 2013 before they departed from France and before they left Saudi Arabia, and tested by PCR for respiratory viruses and bacteria. Overall, 21.5% and 38.8% of pre-Hajj and post-Hajj specimens, respectively, were positive for ≥1 virus (p = 0.003). One third (29.8%) of the participants acquired ≥1 virus, particularly rhinovirus (14.0%), coronavirus E229 (12.4%), and influenza A(H3N2) virus (6.2%) while in Saudi Arabia. None of the participants were positive for the Middle East respiratory syndrome coronavirus. In addition, 50.0% and 62.0% of pre-Hajj and post-Hajj specimens, respectively, were positive for <italic>Streptococcus pneumoniae</italic> (p = 0.053). One third (36.3%) of the participants had acquired <italic>S. pneumoniae</italic> during their stay. Our results confirm high acquisition rates of rhinovirus and <italic>S. pneumoniae</italic> in pilgrims and highlight the acquisition of coronavirus E229.</p></abstract><kwd-group kwd-group-type="author"><title>Keywords: </title><kwd>bacteria</kwd><kwd>viruses</kwd><kwd>cohort study</kwd><kwd>Hajj</kwd><kwd>respiratory tract infections</kwd><kwd>pilgrims</kwd><kwd>Saudi Arabia</kwd></kwd-group></article-meta></front></pmc><affiliations><list></list><tree><noCountry><name sortKey="Al Masri, Malak" sort="Al Masri, Malak" uniqKey="Al Masri M" first="Malak" last="Al Masri">Malak Al Masri</name><name sortKey="Belhouchat, Khadidja" sort="Belhouchat, Khadidja" uniqKey="Belhouchat K" first="Khadidja" last="Belhouchat">Khadidja Belhouchat</name><name sortKey="Benkouiten, Samir" sort="Benkouiten, Samir" uniqKey="Benkouiten S" first="Samir" last="Benkouiten">Samir Benkouiten</name><name sortKey="Brouqui, Philippe" sort="Brouqui, Philippe" uniqKey="Brouqui P" first="Philippe" last="Brouqui">Philippe Brouqui</name><name sortKey="Charrel, Remi" sort="Charrel, Remi" uniqKey="Charrel R" first="Rémi" last="Charrel">Rémi Charrel</name><name sortKey="Drali, Tassadit" sort="Drali, Tassadit" uniqKey="Drali T" first="Tassadit" last="Drali">Tassadit Drali</name><name sortKey="Fournier, Pierre Edouard" sort="Fournier, Pierre Edouard" uniqKey="Fournier P" first="Pierre-Edouard" last="Fournier">Pierre-Edouard Fournier</name><name sortKey="Gautret, Philippe" sort="Gautret, Philippe" uniqKey="Gautret P" first="Philippe" last="Gautret">Philippe Gautret</name><name sortKey="Memish, Ziad A" sort="Memish, Ziad A" uniqKey="Memish Z" first="Ziad A." last="Memish">Ziad A. Memish</name><name sortKey="Nougairede, Antoine" sort="Nougairede, Antoine" uniqKey="Nougairede A" first="Antoine" last="Nougairede">Antoine Nougairede</name><name sortKey="Parola, Philippe" sort="Parola, Philippe" uniqKey="Parola P" first="Philippe" last="Parola">Philippe Parola</name><name sortKey="Raoult, Didier" sort="Raoult, Didier" uniqKey="Raoult D" first="Didier" last="Raoult">Didier Raoult</name><name sortKey="Salez, Nicolas" sort="Salez, Nicolas" uniqKey="Salez N" first="Nicolas" last="Salez">Nicolas Salez</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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