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Use of a Small Peptide Fragment as an Inhibitor of Insulin Fibrillation Process: A Study by High and Low Resolution Spectroscopy

Identifieur interne : 000401 ( Ncbi/Merge ); précédent : 000400; suivant : 000402

Use of a Small Peptide Fragment as an Inhibitor of Insulin Fibrillation Process: A Study by High and Low Resolution Spectroscopy

Auteurs : Victor Banerjee [Inde] ; Rajiv K. Kar [Inde] ; Aritreyee Datta [Inde] ; Krupakar Parthasarathi [Singapour] ; Subhrangsu Chatterjee [Inde] ; Kali P. Das [Inde] ; Anirban Bhunia [Inde]

Source :

RBID : PMC:3756998

Abstract

A non-toxic, nine residue peptide, NIVNVSLVK is shown to interfere with insulin fibrillation by various biophysical methods. Insulin undergoes conformational changes under certain stress conditions leading to amyloid fibrils. Fibrillation of insulin poses a problem in its long-term storage, reducing its efficacy in treating type II diabetes. The dissociation of insulin oligomer to monomer is the key step for the onset of fibrillation. The time course of insulin fibrillation at 62°C using Thioflavin T fluorescence shows an increase in the lag time from 120 min without peptide to 236 min with peptide. Transmission electron micrographs show branched insulin fibrils in its absence and less inter-fibril association in its presence. Upon incubation at 62°C and pH 2.6, insulin lost some α-helical structure as seen by Fourier transformed infra-red spectroscopy (FT-IR), but if the peptide is added, secondary structure is almost fully maintained for 3 h, though lost partially at 4 h. FT-IR spectroscopy also shows that insulin forms the cross beta structure indicative of fibrils beyond 2 h, but in the presence of the peptide, α-helix retention is seen till 4 h. Both size exclusion chromatography and dynamic light scattering show that insulin primarily exists as trimer, whose conversion to a monomer is resisted by the peptide. Saturation transfer difference nuclear magnetic resonance confirms that the hydrophobic residues in the peptide are in close contact with an insulin hydrophobic groove. Molecular dynamics simulations in conjunction with principal component analyses reveal how the peptide interrupts insulin fibrillation. In vitro hemolytic activity of the peptide showed insignificant cytotoxicity against HT1080 cells. The insulin aggregation is probed due to the inter play of two key residues, PheB24 and TyrB26 monitored from molecular dynamics simulations studies. Further new peptide based leads may be developed from this nine residue peptide.


Url:
DOI: 10.1371/journal.pone.0072318
PubMed: 24009675
PubMed Central: 3756998

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PMC:3756998

Le document en format XML

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<p>A non-toxic, nine residue peptide, NIVNVSLVK is shown to interfere with insulin fibrillation by various biophysical methods. Insulin undergoes conformational changes under certain stress conditions leading to amyloid fibrils. Fibrillation of insulin poses a problem in its long-term storage, reducing its efficacy in treating type II diabetes. The dissociation of insulin oligomer to monomer is the key step for the onset of fibrillation. The time course of insulin fibrillation at 62°C using Thioflavin T fluorescence shows an increase in the lag time from 120 min without peptide to 236 min with peptide. Transmission electron micrographs show branched insulin fibrils in its absence and less inter-fibril association in its presence. Upon incubation at 62°C and pH 2.6, insulin lost some α-helical structure as seen by Fourier transformed infra-red spectroscopy (FT-IR), but if the peptide is added, secondary structure is almost fully maintained for 3 h, though lost partially at 4 h. FT-IR spectroscopy also shows that insulin forms the cross beta structure indicative of fibrils beyond 2 h, but in the presence of the peptide, α-helix retention is seen till 4 h. Both size exclusion chromatography and dynamic light scattering show that insulin primarily exists as trimer, whose conversion to a monomer is resisted by the peptide. Saturation transfer difference nuclear magnetic resonance confirms that the hydrophobic residues in the peptide are in close contact with an insulin hydrophobic groove. Molecular dynamics simulations in conjunction with principal component analyses reveal how the peptide interrupts insulin fibrillation.
<italic>In vitro</italic>
hemolytic activity of the peptide showed insignificant cytotoxicity against HT1080 cells. The insulin aggregation is probed due to the inter play of two key residues, Phe
<sup>B24</sup>
and Tyr
<sup>B26</sup>
monitored from molecular dynamics simulations studies. Further new peptide based leads may be developed from this nine residue peptide.</p>
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<journal-id journal-id-type="nlm-ta">PLoS One</journal-id>
<journal-id journal-id-type="iso-abbrev">PLoS ONE</journal-id>
<journal-id journal-id-type="publisher-id">plos</journal-id>
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<issn pub-type="epub">1932-6203</issn>
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<publisher-name>Public Library of Science</publisher-name>
<publisher-loc>San Francisco, USA</publisher-loc>
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<article-id pub-id-type="pmid">24009675</article-id>
<article-id pub-id-type="pmc">3756998</article-id>
<article-id pub-id-type="publisher-id">PONE-D-13-20850</article-id>
<article-id pub-id-type="doi">10.1371/journal.pone.0072318</article-id>
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<subj-group subj-group-type="heading">
<subject>Research Article</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Use of a Small Peptide Fragment as an Inhibitor of Insulin Fibrillation Process: A Study by High and Low Resolution Spectroscopy</article-title>
<alt-title alt-title-type="running-head">NK9 Mediated Inhibition of Insulin Fibrillation</alt-title>
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<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Banerjee</surname>
<given-names>Victor</given-names>
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<xref ref-type="aff" rid="aff1">
<sup>1</sup>
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<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Kar</surname>
<given-names>Rajiv K.</given-names>
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<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<name>
<surname>Datta</surname>
<given-names>Aritreyee</given-names>
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<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<contrib contrib-type="author">
<name>
<surname>Parthasarathi</surname>
<given-names>Krupakar</given-names>
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<xref ref-type="aff" rid="aff3">
<sup>3</sup>
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<contrib contrib-type="author">
<name>
<surname>Chatterjee</surname>
<given-names>Subhrangsu</given-names>
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<xref ref-type="aff" rid="aff2">
<sup>2</sup>
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<surname>Das</surname>
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<xref ref-type="aff" rid="aff1">
<sup>1</sup>
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<xref ref-type="corresp" rid="cor1">
<sup>*</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Bhunia</surname>
<given-names>Anirban</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="cor1">
<sup>*</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<label>1</label>
<addr-line>Department of Chemistry, Bose Institute, Kolkata, India</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Biomolecular NMR and Drug Design Laboratory, Department of Biophysics, Bose Institute, Kolkata, India</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>Department of Microbiology, National University of Singapore, Singapore, Singapore</addr-line>
</aff>
<contrib-group>
<contrib contrib-type="editor">
<name>
<surname>Permyakov</surname>
<given-names>Eugene A.</given-names>
</name>
<role>Editor</role>
<xref ref-type="aff" rid="edit1"></xref>
</contrib>
</contrib-group>
<aff id="edit1">
<addr-line>Russian Academy of Sciences, Institute for Biological Instrumentation, Russian Federation</addr-line>
</aff>
<author-notes>
<corresp id="cor1">* E-mail:
<email>bhunia@jcbose.ac.in</email>
(AB);
<email>kalipada@jcbose.ac.in</email>
(KPD)</corresp>
<fn fn-type="COI-statement">
<p>
<bold>Competing Interests: </bold>
The authors have declared that no competing interests exist.</p>
</fn>
<fn fn-type="con">
<p>Conceived and designed the experiments: VB RKK AD AB SC KPD. Performed the experiments: VB RKK AD AB KP. Analyzed the data: VB RKK AD AB KPD. Contributed reagents/materials/analysis tools: AB SC KPD. Wrote the paper: VB RKK AD AB SC KPD.</p>
</fn>
</author-notes>
<pub-date pub-type="collection">
<year>2013</year>
</pub-date>
<pub-date pub-type="epub">
<day>29</day>
<month>8</month>
<year>2013</year>
</pub-date>
<volume>8</volume>
<issue>8</issue>
<elocation-id>e72318</elocation-id>
<history>
<date date-type="received">
<day>21</day>
<month>5</month>
<year>2013</year>
</date>
<date date-type="accepted">
<day>10</day>
<month>7</month>
<year>2013</year>
</date>
</history>
<permissions>
<copyright-statement>© 2013 Banerjee et al</copyright-statement>
<copyright-year>2013</copyright-year>
<copyright-holder>Banerjee et al</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.</license-p>
</license>
</permissions>
<abstract>
<p>A non-toxic, nine residue peptide, NIVNVSLVK is shown to interfere with insulin fibrillation by various biophysical methods. Insulin undergoes conformational changes under certain stress conditions leading to amyloid fibrils. Fibrillation of insulin poses a problem in its long-term storage, reducing its efficacy in treating type II diabetes. The dissociation of insulin oligomer to monomer is the key step for the onset of fibrillation. The time course of insulin fibrillation at 62°C using Thioflavin T fluorescence shows an increase in the lag time from 120 min without peptide to 236 min with peptide. Transmission electron micrographs show branched insulin fibrils in its absence and less inter-fibril association in its presence. Upon incubation at 62°C and pH 2.6, insulin lost some α-helical structure as seen by Fourier transformed infra-red spectroscopy (FT-IR), but if the peptide is added, secondary structure is almost fully maintained for 3 h, though lost partially at 4 h. FT-IR spectroscopy also shows that insulin forms the cross beta structure indicative of fibrils beyond 2 h, but in the presence of the peptide, α-helix retention is seen till 4 h. Both size exclusion chromatography and dynamic light scattering show that insulin primarily exists as trimer, whose conversion to a monomer is resisted by the peptide. Saturation transfer difference nuclear magnetic resonance confirms that the hydrophobic residues in the peptide are in close contact with an insulin hydrophobic groove. Molecular dynamics simulations in conjunction with principal component analyses reveal how the peptide interrupts insulin fibrillation.
<italic>In vitro</italic>
hemolytic activity of the peptide showed insignificant cytotoxicity against HT1080 cells. The insulin aggregation is probed due to the inter play of two key residues, Phe
<sup>B24</sup>
and Tyr
<sup>B26</sup>
monitored from molecular dynamics simulations studies. Further new peptide based leads may be developed from this nine residue peptide.</p>
</abstract>
<funding-group>
<funding-statement>This work was supported partially by CSIR (fellowship No. 09015(0358)/2008-EMR-I to VB) and partially funded by Institutional fund (to KP and AB). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</funding-statement>
</funding-group>
<counts>
<page-count count="15"></page-count>
</counts>
</article-meta>
</front>
</pmc>
<affiliations>
<list>
<country>
<li>Inde</li>
<li>Singapour</li>
</country>
<orgName>
<li>Université nationale de Singapour</li>
</orgName>
</list>
<tree>
<country name="Inde">
<noRegion>
<name sortKey="Banerjee, Victor" sort="Banerjee, Victor" uniqKey="Banerjee V" first="Victor" last="Banerjee">Victor Banerjee</name>
</noRegion>
<name sortKey="Bhunia, Anirban" sort="Bhunia, Anirban" uniqKey="Bhunia A" first="Anirban" last="Bhunia">Anirban Bhunia</name>
<name sortKey="Chatterjee, Subhrangsu" sort="Chatterjee, Subhrangsu" uniqKey="Chatterjee S" first="Subhrangsu" last="Chatterjee">Subhrangsu Chatterjee</name>
<name sortKey="Das, Kali P" sort="Das, Kali P" uniqKey="Das K" first="Kali P." last="Das">Kali P. Das</name>
<name sortKey="Datta, Aritreyee" sort="Datta, Aritreyee" uniqKey="Datta A" first="Aritreyee" last="Datta">Aritreyee Datta</name>
<name sortKey="Kar, Rajiv K" sort="Kar, Rajiv K" uniqKey="Kar R" first="Rajiv K." last="Kar">Rajiv K. Kar</name>
</country>
<country name="Singapour">
<noRegion>
<name sortKey="Parthasarathi, Krupakar" sort="Parthasarathi, Krupakar" uniqKey="Parthasarathi K" first="Krupakar" last="Parthasarathi">Krupakar Parthasarathi</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

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