CovidV1, PubMed, Corpus, bibRecord, 000139

Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.

Identifieur interne : 000139 ( PubMed/Corpus ); précédent : 000138; suivant : 000140

Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.

Auteurs : Regina Konrad ; Ute Eberle ; Alexandra Dangel ; Bianca Treis ; Anja Berger ; Katja Bengs ; Volker Fingerle ; Bernhard Liebl ; Nikolaus Ackermann ; Andreas Sing

Source :

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin [ 1560-7917 ] ; 2020.

RBID : pubmed:32156330

Abstract

The need for timely establishment of diagnostic assays arose when Germany was confronted with the first travel-associated outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in Europe. We describe our laboratory experiences during a large contact tracing investigation, comparing previously published real-time RT-PCR assays in different PCR systems and a commercial kit. We found that assay performance using the same primers and probes with different PCR systems varied and the commercial kit performed well.

DOI: 10.2807/1560-7917.ES.2020.25.9.2000173
PubMed: 32156330

Links to Exploration step

pubmed:32156330

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.</title>
<author><name sortKey="Konrad, Regina" sort="Konrad, Regina" uniqKey="Konrad R" first="Regina" last="Konrad">Regina Konrad</name>
<affiliation><nlm:affiliation>These authors contributed equally to this work.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Eberle, Ute" sort="Eberle, Ute" uniqKey="Eberle U" first="Ute" last="Eberle">Ute Eberle</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Dangel, Alexandra" sort="Dangel, Alexandra" uniqKey="Dangel A" first="Alexandra" last="Dangel">Alexandra Dangel</name>
<affiliation><nlm:affiliation>These authors contributed equally to this work.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Treis, Bianca" sort="Treis, Bianca" uniqKey="Treis B" first="Bianca" last="Treis">Bianca Treis</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Berger, Anja" sort="Berger, Anja" uniqKey="Berger A" first="Anja" last="Berger">Anja Berger</name>
<affiliation><nlm:affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Bengs, Katja" sort="Bengs, Katja" uniqKey="Bengs K" first="Katja" last="Bengs">Katja Bengs</name>
<affiliation><nlm:affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Fingerle, Volker" sort="Fingerle, Volker" uniqKey="Fingerle V" first="Volker" last="Fingerle">Volker Fingerle</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Liebl, Bernhard" sort="Liebl, Bernhard" uniqKey="Liebl B" first="Bernhard" last="Liebl">Bernhard Liebl</name>
<affiliation><nlm:affiliation>Ludwig Maximilians-Universität, Munich, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Ackermann, Nikolaus" sort="Ackermann, Nikolaus" uniqKey="Ackermann N" first="Nikolaus" last="Ackermann">Nikolaus Ackermann</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Sing, Andreas" sort="Sing, Andreas" uniqKey="Sing A" first="Andreas" last="Sing">Andreas Sing</name>
<affiliation><nlm:affiliation>Ludwig Maximilians-Universität, Munich, Germany.</nlm:affiliation>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2020">2020</date>
<idno type="RBID">pubmed:32156330</idno>
<idno type="pmid">32156330</idno>
<idno type="doi">10.2807/1560-7917.ES.2020.25.9.2000173</idno>
<idno type="wicri:Area/PubMed/Corpus">000139</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000139</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.</title>
<author><name sortKey="Konrad, Regina" sort="Konrad, Regina" uniqKey="Konrad R" first="Regina" last="Konrad">Regina Konrad</name>
<affiliation><nlm:affiliation>These authors contributed equally to this work.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Eberle, Ute" sort="Eberle, Ute" uniqKey="Eberle U" first="Ute" last="Eberle">Ute Eberle</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Dangel, Alexandra" sort="Dangel, Alexandra" uniqKey="Dangel A" first="Alexandra" last="Dangel">Alexandra Dangel</name>
<affiliation><nlm:affiliation>These authors contributed equally to this work.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Treis, Bianca" sort="Treis, Bianca" uniqKey="Treis B" first="Bianca" last="Treis">Bianca Treis</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Berger, Anja" sort="Berger, Anja" uniqKey="Berger A" first="Anja" last="Berger">Anja Berger</name>
<affiliation><nlm:affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Bengs, Katja" sort="Bengs, Katja" uniqKey="Bengs K" first="Katja" last="Bengs">Katja Bengs</name>
<affiliation><nlm:affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Fingerle, Volker" sort="Fingerle, Volker" uniqKey="Fingerle V" first="Volker" last="Fingerle">Volker Fingerle</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Liebl, Bernhard" sort="Liebl, Bernhard" uniqKey="Liebl B" first="Bernhard" last="Liebl">Bernhard Liebl</name>
<affiliation><nlm:affiliation>Ludwig Maximilians-Universität, Munich, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Ackermann, Nikolaus" sort="Ackermann, Nikolaus" uniqKey="Ackermann N" first="Nikolaus" last="Ackermann">Nikolaus Ackermann</name>
<affiliation><nlm:affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Sing, Andreas" sort="Sing, Andreas" uniqKey="Sing A" first="Andreas" last="Sing">Andreas Sing</name>
<affiliation><nlm:affiliation>Ludwig Maximilians-Universität, Munich, Germany.</nlm:affiliation>
</affiliation>
</author>
</analytic>
<series><title level="j">Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin</title>
<idno type="eISSN">1560-7917</idno>
<imprint><date when="2020" type="published">2020</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The need for timely establishment of diagnostic assays arose when Germany was confronted with the first travel-associated outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in Europe. We describe our laboratory experiences during a large contact tracing investigation, comparing previously published real-time RT-PCR assays in different PCR systems and a commercial kit. We found that assay performance using the same primers and probes with different PCR systems varied and the commercial kit performed well.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">32156330</PMID>
<DateRevised><Year>2020</Year>
<Month>03</Month>
<Day>16</Day>
</DateRevised>
<Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1560-7917</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>25</Volume>
<Issue>9</Issue>
<PubDate><Year>2020</Year>
<Month>03</Month>
</PubDate>
</JournalIssue>
<Title>Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin</Title>
<ISOAbbreviation>Euro Surveill.</ISOAbbreviation>
</Journal>
<ArticleTitle>Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.</ArticleTitle>
<ELocationID EIdType="doi" ValidYN="Y">10.2807/1560-7917.ES.2020.25.9.2000173</ELocationID>
<Abstract><AbstractText>The need for timely establishment of diagnostic assays arose when Germany was confronted with the first travel-associated outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in Europe. We describe our laboratory experiences during a large contact tracing investigation, comparing previously published real-time RT-PCR assays in different PCR systems and a commercial kit. We found that assay performance using the same primers and probes with different PCR systems varied and the commercial kit performed well.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Konrad</LastName>
<ForeName>Regina</ForeName>
<Initials>R</Initials>
<AffiliationInfo><Affiliation>These authors contributed equally to this work.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Eberle</LastName>
<ForeName>Ute</ForeName>
<Initials>U</Initials>
<AffiliationInfo><Affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>These authors contributed equally to this work.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Dangel</LastName>
<ForeName>Alexandra</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>These authors contributed equally to this work.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Treis</LastName>
<ForeName>Bianca</ForeName>
<Initials>B</Initials>
<AffiliationInfo><Affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Berger</LastName>
<ForeName>Anja</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Bengs</LastName>
<ForeName>Katja</ForeName>
<Initials>K</Initials>
<AffiliationInfo><Affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Fingerle</LastName>
<ForeName>Volker</ForeName>
<Initials>V</Initials>
<AffiliationInfo><Affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Liebl</LastName>
<ForeName>Bernhard</ForeName>
<Initials>B</Initials>
<AffiliationInfo><Affiliation>Ludwig Maximilians-Universität, Munich, Germany.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>State Institute of Health, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ackermann</LastName>
<ForeName>Nikolaus</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>Unit of Virology, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>These authors contributed equally to this work.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sing</LastName>
<ForeName>Andreas</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Ludwig Maximilians-Universität, Munich, Germany.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>These authors contributed equally to this work.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Public Health Microbiology Unit, Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo><Country>Sweden</Country>
<MedlineTA>Euro Surveill</MedlineTA>
<NlmUniqueID>100887452</NlmUniqueID>
<ISSNLinking>1025-496X</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">COVID-19</Keyword>
<Keyword MajorTopicYN="Y">Corona Virus</Keyword>
<Keyword MajorTopicYN="Y">Infectious disease</Keyword>
<Keyword MajorTopicYN="Y">Laboratory Diagnostics</Keyword>
<Keyword MajorTopicYN="Y">Molecular Testing</Keyword>
<Keyword MajorTopicYN="Y">Real-Time PCR</Keyword>
<Keyword MajorTopicYN="Y">SARS-CoV-2</Keyword>
<Keyword MajorTopicYN="Y">outbreaks</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2020</Year>
<Month>3</Month>
<Day>12</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2020</Year>
<Month>3</Month>
<Day>12</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2020</Year>
<Month>3</Month>
<Day>12</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">32156330</ArticleId>
<ArticleId IdType="doi">10.2807/1560-7917.ES.2020.25.9.2000173</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/CovidV1/Data/PubMed/Corpus

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000139 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 000139 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Sante
   |area=    CovidV1
   |flux=    PubMed
   |étape=   Corpus
   |type=    RBID
   |clé=     pubmed:32156330
   |texte=   Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i   -Sk "pubmed:32156330" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd   \
       | NlmPubMed2Wicri -a CovidV1

This area was generated with Dilib version V0.6.33.
Data generation: Fri Mar 27 18:14:15 2020. Site generation: Sun Jan 31 15:15:08 2021

	Serveur d'exploration Covid
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration Covid

Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.

Rapid establishment of laboratory diagnostics for the novel coronavirus SARS-CoV-2 in Bavaria, Germany, February 2020.

Source :

Abstract

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki