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Biosynthesis and Bioactivity of Prodiginine Analogs in Marine Bacteria, Pseudoalteromonas: A Mini Review

Identifieur interne : 000896 ( Ncbi/Merge ); précédent : 000895; suivant : 000897

Biosynthesis and Bioactivity of Prodiginine Analogs in Marine Bacteria, Pseudoalteromonas: A Mini Review

Auteurs : Francis E. Sakai-Kawada [États-Unis] ; Courtney G. Ip [États-Unis] ; Kehau A. Hagiwara [États-Unis] ; Jonathan D. Awaya [États-Unis]

Source :

RBID : PMC:6667630

Abstract

The Prodiginine family consists of primarily red-pigmented tripyrrole secondary metabolites that were first characterized in the Gram-negative bacterial species Serratia marcescens and demonstrates a wide array of biological activities and applications. Derivatives of prodiginine have since been characterized in the marine γ-proteobacterium, Pseudoalteromonas. Although biosynthetic gene clusters involved in prodiginine synthesis display homology among genera, there is an evident structural difference in the resulting metabolites. This review will summarize prodiginine biosynthesis, bioactivity, and gene regulation in Pseudoalteromonas in comparison to the previously characterized species of Serratia, discuss the ecological contributions of Pseudoalteromonas in the marine microbiome and their eukaryotic hosts, and consider the importance of modern functional genomics and classic DNA manipulation to understand the overall prodiginine biosynthesis pathway.


Url:
DOI: 10.3389/fmicb.2019.01715
PubMed: 31396200
PubMed Central: 6667630

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PMC:6667630

Le document en format XML

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<title xml:lang="en" level="a" type="main">Biosynthesis and Bioactivity of Prodiginine Analogs in Marine Bacteria,
<italic>Pseudoalteromonas</italic>
: A Mini Review</title>
<author>
<name sortKey="Sakai Kawada, Francis E" sort="Sakai Kawada, Francis E" uniqKey="Sakai Kawada F" first="Francis E." last="Sakai-Kawada">Francis E. Sakai-Kawada</name>
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<institution>Department of Molecular Biosciences and Bioengineering, University of Hawai´i at Mānoa</institution>
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<addr-line>Honolulu, HI</addr-line>
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<country>United States</country>
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<country xml:lang="fr">États-Unis</country>
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<name sortKey="Ip, Courtney G" sort="Ip, Courtney G" uniqKey="Ip C" first="Courtney G." last="Ip">Courtney G. Ip</name>
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<institution>Department of Biology, University of Hawai´i at Hilo</institution>
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<country xml:lang="fr">États-Unis</country>
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<name sortKey="Hagiwara, Kehau A" sort="Hagiwara, Kehau A" uniqKey="Hagiwara K" first="Kehau A." last="Hagiwara">Kehau A. Hagiwara</name>
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<addr-line>Charleston, SC</addr-line>
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<country>United States</country>
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<country xml:lang="fr">États-Unis</country>
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<p>The Prodiginine family consists of primarily red-pigmented tripyrrole secondary metabolites that were first characterized in the Gram-negative bacterial species
<italic>Serratia marcescens</italic>
and demonstrates a wide array of biological activities and applications. Derivatives of prodiginine have since been characterized in the marine γ-proteobacterium,
<italic>Pseudoalteromonas</italic>
. Although biosynthetic gene clusters involved in prodiginine synthesis display homology among genera, there is an evident structural difference in the resulting metabolites. This review will summarize prodiginine biosynthesis, bioactivity, and gene regulation in
<italic>Pseudoalteromonas</italic>
in comparison to the previously characterized species of
<italic>Serratia</italic>
, discuss the ecological contributions of
<italic>Pseudoalteromonas</italic>
in the marine microbiome and their eukaryotic hosts, and consider the importance of modern functional genomics and classic DNA manipulation to understand the overall prodiginine biosynthesis pathway.</p>
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</TEI>
<pmc article-type="review-article">
<pmc-dir>properties open_access</pmc-dir>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Front Microbiol</journal-id>
<journal-id journal-id-type="iso-abbrev">Front Microbiol</journal-id>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title-group>
<journal-title>Frontiers in Microbiology</journal-title>
</journal-title-group>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="pmid">31396200</article-id>
<article-id pub-id-type="pmc">6667630</article-id>
<article-id pub-id-type="doi">10.3389/fmicb.2019.01715</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Mini Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Biosynthesis and Bioactivity of Prodiginine Analogs in Marine Bacteria,
<italic>Pseudoalteromonas</italic>
: A Mini Review</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Sakai-Kawada</surname>
<given-names>Francis E.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">
<sup>*</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/640426/overview"></uri>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ip</surname>
<given-names>Courtney G.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/747112/overview"></uri>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Hagiwara</surname>
<given-names>Kehau A.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/686683/overview"></uri>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Awaya</surname>
<given-names>Jonathan D.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/743897/overview"></uri>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Molecular Biosciences and Bioengineering, University of Hawai´i at Mānoa</institution>
,
<addr-line>Honolulu, HI</addr-line>
,
<country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Biology, University of Hawai´i at Hilo</institution>
,
<addr-line>Hilo, HI</addr-line>
,
<country>United States</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Institute of Marine and Environmental Technology, University of Maryland, Baltimore</institution>
,
<addr-line>Baltimore, MD</addr-line>
,
<country>United States</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Chemical Sciences Division, National Institute of Standards and Technology, Hollings Marine Laboratory</institution>
,
<addr-line>Charleston, SC</addr-line>
,
<country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Marcelino T. Suzuki, Sorbonne Universités, France</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Christopher Morton Thomas, University of Birmingham, United Kingdom; Cecilia Susana Demergasso, Universidad Católica del Norte, Chile</p>
</fn>
<corresp id="c001">*Correspondence: Francis E. Sakai-Kawada,
<email>sakai3@hawaii.edu</email>
</corresp>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Aquatic Microbiology, a section of the journal Frontiers in Microbiology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>24</day>
<month>7</month>
<year>2019</year>
</pub-date>
<pub-date pub-type="collection">
<year>2019</year>
</pub-date>
<volume>10</volume>
<elocation-id>1715</elocation-id>
<history>
<date date-type="received">
<day>05</day>
<month>2</month>
<year>2019</year>
</date>
<date date-type="accepted">
<day>11</day>
<month>7</month>
<year>2019</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright © 2019 Sakai-Kawada, Ip, Hagiwara and Awaya.</copyright-statement>
<copyright-year>2019</copyright-year>
<copyright-holder>Sakai-Kawada, Ip, Hagiwara and Awaya</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</license-p>
</license>
</permissions>
<abstract>
<p>The Prodiginine family consists of primarily red-pigmented tripyrrole secondary metabolites that were first characterized in the Gram-negative bacterial species
<italic>Serratia marcescens</italic>
and demonstrates a wide array of biological activities and applications. Derivatives of prodiginine have since been characterized in the marine γ-proteobacterium,
<italic>Pseudoalteromonas</italic>
. Although biosynthetic gene clusters involved in prodiginine synthesis display homology among genera, there is an evident structural difference in the resulting metabolites. This review will summarize prodiginine biosynthesis, bioactivity, and gene regulation in
<italic>Pseudoalteromonas</italic>
in comparison to the previously characterized species of
<italic>Serratia</italic>
, discuss the ecological contributions of
<italic>Pseudoalteromonas</italic>
in the marine microbiome and their eukaryotic hosts, and consider the importance of modern functional genomics and classic DNA manipulation to understand the overall prodiginine biosynthesis pathway.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Pseudoalteromonas</italic>
</kwd>
<kwd>prodiginines</kwd>
<kwd>prodigiosin</kwd>
<kwd>secondary metabolites</kwd>
<kwd>pigments</kwd>
<kwd>marine bacteria</kwd>
</kwd-group>
<counts>
<fig-count count="1"></fig-count>
<table-count count="1"></table-count>
<equation-count count="0"></equation-count>
<ref-count count="74"></ref-count>
<page-count count="9"></page-count>
<word-count count="0"></word-count>
</counts>
</article-meta>
</front>
</pmc>
<affiliations>
<list>
<country>
<li>États-Unis</li>
</country>
</list>
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<country name="États-Unis">
<noRegion>
<name sortKey="Sakai Kawada, Francis E" sort="Sakai Kawada, Francis E" uniqKey="Sakai Kawada F" first="Francis E." last="Sakai-Kawada">Francis E. Sakai-Kawada</name>
</noRegion>
<name sortKey="Awaya, Jonathan D" sort="Awaya, Jonathan D" uniqKey="Awaya J" first="Jonathan D." last="Awaya">Jonathan D. Awaya</name>
<name sortKey="Awaya, Jonathan D" sort="Awaya, Jonathan D" uniqKey="Awaya J" first="Jonathan D." last="Awaya">Jonathan D. Awaya</name>
<name sortKey="Hagiwara, Kehau A" sort="Hagiwara, Kehau A" uniqKey="Hagiwara K" first="Kehau A." last="Hagiwara">Kehau A. Hagiwara</name>
<name sortKey="Hagiwara, Kehau A" sort="Hagiwara, Kehau A" uniqKey="Hagiwara K" first="Kehau A." last="Hagiwara">Kehau A. Hagiwara</name>
<name sortKey="Ip, Courtney G" sort="Ip, Courtney G" uniqKey="Ip C" first="Courtney G." last="Ip">Courtney G. Ip</name>
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</record>

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