Ai-lncRNA EGOT enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer
Identifieur interne : 000B01 ( Main/Merge ); précédent : 000B00; suivant : 000B02Ai-lncRNA EGOT enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer
Auteurs : Shouping Xu [République populaire de Chine] ; Peiyuan Wang [République populaire de Chine] ; Jian Zhang [République populaire de Chine] ; Hao Wu [République populaire de Chine] ; Shiyao Sui [République populaire de Chine] ; Jinfeng Zhang [République populaire de Chine] ; Qin Wang [République populaire de Chine] ; Kun Qiao [République populaire de Chine] ; Weiwei Yang [République populaire de Chine] ; Hongbiao Xu [République populaire de Chine] ; Da Pang [République populaire de Chine]Source :
- Molecular Cancer [ 1476-4598 ] ; 2019.
Abstract
The biology function of antisense intronic long noncoding RNA (Ai-lncRNA) is still unknown. Meanwhile, cancer patients with paclitaxel resistance have limited therapeutic options in the clinic. However, the potential involvement of Ai-lncRNA in paclitaxel sensitivity remains unclear in human cancer.
Whole transcriptome sequencing of 33 breast specimens was performed to identify Ai-lncRNA
These findings broaden comprehensive understanding of the biology function of Ai-lncRNAs. Proper regulation of
The online version of this article (10.1186/s12943-019-1017-z) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s12943-019-1017-z
PubMed: 30999914
PubMed Central: 6471868
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PMC:6471868Le document en format XML
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enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer</title>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Ai-lncRNA <italic>EGOT</italic>
enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions in human cancer</title>
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<author><name sortKey="Wang, Peiyuan" sort="Wang, Peiyuan" uniqKey="Wang P" first="Peiyuan" last="Wang">Peiyuan Wang</name>
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<author><name sortKey="Wu, Hao" sort="Wu, Hao" uniqKey="Wu H" first="Hao" last="Wu">Hao Wu</name>
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150 Haping Road, Harbin, 150081 China</nlm:aff>
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<author><name sortKey="Sui, Shiyao" sort="Sui, Shiyao" uniqKey="Sui S" first="Shiyao" last="Sui">Shiyao Sui</name>
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<institution>Harbin Medical University Cancer Hospital,</institution>
</institution-wrap>
150 Haping Road, Harbin, 150081 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>150 Haping Road, Harbin</wicri:regionArea>
<wicri:noRegion>Harbin</wicri:noRegion>
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<author><name sortKey="Zhang, Jinfeng" sort="Zhang, Jinfeng" uniqKey="Zhang J" first="Jinfeng" last="Zhang">Jinfeng Zhang</name>
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150 Haping Road, Harbin, 150081 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
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<wicri:noRegion>Harbin</wicri:noRegion>
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<author><name sortKey="Wang, Qin" sort="Wang, Qin" uniqKey="Wang Q" first="Qin" last="Wang">Qin Wang</name>
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<institution>Harbin Medical University Cancer Hospital,</institution>
</institution-wrap>
150 Haping Road, Harbin, 150081 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
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<wicri:noRegion>Harbin</wicri:noRegion>
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<author><name sortKey="Qiao, Kun" sort="Qiao, Kun" uniqKey="Qiao K" first="Kun" last="Qiao">Kun Qiao</name>
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</institution-wrap>
150 Haping Road, Harbin, 150081 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>150 Haping Road, Harbin</wicri:regionArea>
<wicri:noRegion>Harbin</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Yang, Weiwei" sort="Yang, Weiwei" uniqKey="Yang W" first="Weiwei" last="Yang">Weiwei Yang</name>
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<institution>Department of Pathology,</institution>
<institution>Harbin Medical University,</institution>
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Harbin, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Harbin</wicri:regionArea>
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<author><name sortKey="Xu, Hongbiao" sort="Xu, Hongbiao" uniqKey="Xu H" first="Hongbiao" last="Xu">Hongbiao Xu</name>
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</institution-wrap>
150 Haping Road, Harbin, 150081 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
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<author><name sortKey="Pang, Da" sort="Pang, Da" uniqKey="Pang D" first="Da" last="Pang">Da Pang</name>
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<institution>Harbin Medical University Cancer Hospital,</institution>
</institution-wrap>
150 Haping Road, Harbin, 150081 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>150 Haping Road, Harbin</wicri:regionArea>
<wicri:noRegion>Harbin</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:aff id="Aff3">Heilongjiang Academy of Medical Sciences, 157 Baojian Road, Harbin, 150086 China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Heilongjiang Academy of Medical Sciences, 157 Baojian Road, Harbin</wicri:regionArea>
<wicri:noRegion>Harbin</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j">Molecular Cancer</title>
<idno type="eISSN">1476-4598</idno>
<imprint><date when="2019">2019</date>
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<front><div type="abstract" xml:lang="en"><sec><title>Background</title>
<p id="Par1">The biology function of antisense intronic long noncoding RNA (Ai-lncRNA) is still unknown. Meanwhile, cancer patients with paclitaxel resistance have limited therapeutic options in the clinic. However, the potential involvement of Ai-lncRNA in paclitaxel sensitivity remains unclear in human cancer.</p>
</sec>
<sec><title>Methods</title>
<p id="Par2">Whole transcriptome sequencing of 33 breast specimens was performed to identify Ai-lncRNA <italic>EGOT</italic>
. Next, the role of <italic>EGOT</italic>
in regulation of paclitaxel sensitivity was investigated. Moreover, the mechanism of <italic>EGOT</italic>
enhancing autophagy sensitizes paclitaxel cytotoxicity via upregulation of ITPR1 expression by RNA-RNA and RNA-protein interactions was investigated in detail. Furthermore, upstream transcriptional regulation of <italic>EGOT</italic>
expression was also investigated by co-immunoprecipitation and chromatin immunoprecipitation. Finally, clinical breast specimens in our cohort, TCGA and ICGC were applied to validate the role of <italic>EGOT</italic>
in enhancing of paclitaxel sensitivity.</p>
</sec>
<sec><title>Results</title>
<p id="Par3"><italic>EGOT</italic>
enhances autophagosome accumulation via the up-regulation of ITPR1 expression, thereby sensitizing cells to paclitaxel toxicity. Mechanistically, on one hand, <italic>EGOT</italic>
upregulates ITPR1 levels via formation of a <italic>pre-ITPR1/EGOT</italic>
dsRNA that induces <italic>pre-ITPR1</italic>
accumulation to increase ITPR1 protein expression <italic>in cis</italic>
. On the other hand, <italic>EGOT</italic>
recruits hnRNPH1 to enhance the alternative splicing of pre-ITPR1 <italic>in trans</italic>
via two binding motifs in <italic>EGOT</italic>
segment 2 (324–645 nucleotides) in exon 1. Moreover, <italic>EGOT</italic>
is transcriptionally regulated by stress conditions. Finally, <italic>EGOT</italic>
expression enhances paclitaxel sensitivity via assessment of cancer specimens.</p>
</sec>
<sec><title>Conclusions</title>
<p id="Par4">These findings broaden comprehensive understanding of the biology function of Ai-lncRNAs. Proper regulation of <italic>EGOT</italic>
may be a novel synergistic strategy for enhancing paclitaxel sensitivity in cancer therapy.</p>
</sec>
<sec><title>Electronic supplementary material</title>
<p>The online version of this article (10.1186/s12943-019-1017-z) contains supplementary material, which is available to authorized users.</p>
</sec>
</div>
</front>
<back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Yu, Y" uniqKey="Yu Y">Y Yu</name>
</author>
<author><name sortKey="Gaillard, S" uniqKey="Gaillard S">S Gaillard</name>
</author>
<author><name sortKey="Phillip, Jm" uniqKey="Phillip J">JM Phillip</name>
</author>
<author><name sortKey="Huang, Tc" uniqKey="Huang T">TC Huang</name>
</author>
<author><name sortKey="Pinto, Sm" uniqKey="Pinto S">SM Pinto</name>
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