Assessment of Genetic Diversity, Relationships and Structure among Korean Native Cattle Breeds Using Microsatellite Markers.
Identifieur interne : 000119 ( PubMed/Curation ); précédent : 000118; suivant : 000120Assessment of Genetic Diversity, Relationships and Structure among Korean Native Cattle Breeds Using Microsatellite Markers.
Auteurs : Sangwon Suh [Corée du Sud] ; Young-Sin Kim [Corée du Sud] ; Chang-Yeon Cho [Corée du Sud] ; Mi-Jeong Byun [Corée du Sud] ; Seong-Bok Choi [Corée du Sud] ; Yeoung-Gyu Ko [Corée du Sud] ; Chang Woo Lee [Corée du Sud] ; Kyoung-Sub Jung [Corée du Sud] ; Kyoung Hun Bae [Corée du Sud] ; Jae-Hwan Kim [Corée du Sud]Source :
- Asian-Australasian journal of animal sciences [ 1011-2367 ] ; 2014.
Abstract
Four Korean native cattle (KNC) breeds-Hanwoo, Chikso, Heugu, and Jeju black-are entered in the Domestic Animal Diversity Information System of the United Nations Food and Agriculture Organization (FAO). The objective of this study was to assess the genetic diversity, phylogenetic relationships and population structure of these KNC breeds (n = 120) and exotic breeds (Holstein and Charolais, n = 56). Thirty microsatellite loci recommended by the International Society for Animal Genetics/FAO were genotyped. These genotypes were used to determine the allele frequencies, allelic richness, heterozygosity and polymorphism information content per locus and breed. Genetic diversity was lower in Heugu and Jeju black breeds. Phylogenetic analysis, Factorial Correspondence Analysis and genetic clustering grouped each breed in its own cluster, which supported the genetic uniqueness of the KNC breeds. These results will be useful for conservation and management of KNC breeds as animal genetic resources.
DOI: 10.5713/ajas.2014.14435
PubMed: 25358313
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Provincial Livestock Research Center, Hoengseong, Gangwon 225-831</wicri:regionArea></affiliation></author></analytic><series><title level="j">Asian-Australasian journal of animal sciences</title><idno type="ISSN">1011-2367</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Four Korean native cattle (KNC) breeds-Hanwoo, Chikso, Heugu, and Jeju black-are entered in the Domestic Animal Diversity Information System of the United Nations Food and Agriculture Organization (FAO). The objective of this study was to assess the genetic diversity, phylogenetic relationships and population structure of these KNC breeds (n = 120) and exotic breeds (Holstein and Charolais, n = 56). Thirty microsatellite loci recommended by the International Society for Animal Genetics/FAO were genotyped. These genotypes were used to determine the allele frequencies, allelic richness, heterozygosity and polymorphism information content per locus and breed. Genetic diversity was lower in Heugu and Jeju black breeds. Phylogenetic analysis, Factorial Correspondence Analysis and genetic clustering grouped each breed in its own cluster, which supported the genetic uniqueness of the KNC breeds. These results will be useful for conservation and management of KNC breeds as animal genetic resources.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">25358313</PMID><DateCreated><Year>2014</Year><Month>10</Month><Day>31</Day></DateCreated><DateCompleted><Year>2014</Year><Month>10</Month><Day>31</Day></DateCompleted><DateRevised><Year>2014</Year><Month>11</Month><Day>05</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">1011-2367</ISSN><JournalIssue CitedMedium="Print"><Volume>27</Volume><Issue>11</Issue><PubDate><Year>2014</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Asian-Australasian journal of animal sciences</Title><ISOAbbreviation>Asian-australas. J. Anim. Sci.</ISOAbbreviation></Journal><ArticleTitle>Assessment of Genetic Diversity, Relationships and Structure among Korean Native Cattle Breeds Using Microsatellite Markers.</ArticleTitle><Pagination><MedlinePgn>1548-53</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.5713/ajas.2014.14435</ELocationID><Abstract><AbstractText>Four Korean native cattle (KNC) breeds-Hanwoo, Chikso, Heugu, and Jeju black-are entered in the Domestic Animal Diversity Information System of the United Nations Food and Agriculture Organization (FAO). The objective of this study was to assess the genetic diversity, phylogenetic relationships and population structure of these KNC breeds (n = 120) and exotic breeds (Holstein and Charolais, n = 56). Thirty microsatellite loci recommended by the International Society for Animal Genetics/FAO were genotyped. These genotypes were used to determine the allele frequencies, allelic richness, heterozygosity and polymorphism information content per locus and breed. Genetic diversity was lower in Heugu and Jeju black breeds. Phylogenetic analysis, Factorial Correspondence Analysis and genetic clustering grouped each breed in its own cluster, which supported the genetic uniqueness of the KNC breeds. These results will be useful for conservation and management of KNC breeds as animal genetic resources.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Suh</LastName><ForeName>Sangwon</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kim</LastName><ForeName>Young-Sin</ForeName><Initials>YS</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cho</LastName><ForeName>Chang-Yeon</ForeName><Initials>CY</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Byun</LastName><ForeName>Mi-Jeong</ForeName><Initials>MJ</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Choi</LastName><ForeName>Seong-Bok</ForeName><Initials>SB</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ko</LastName><ForeName>Yeoung-Gyu</ForeName><Initials>YG</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lee</LastName><ForeName>Chang Woo</ForeName><Initials>CW</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jung</LastName><ForeName>Kyoung-Sub</ForeName><Initials>KS</Initials><AffiliationInfo><Affiliation>Chungbuk Institute of Livestock and Veterinary Research, Cheongwon, Chungbuk 363-931, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bae</LastName><ForeName>Kyoung Hun</ForeName><Initials>KH</Initials><AffiliationInfo><Affiliation>Jeju Special Self-Governing Province Livestock Promotion, Jeju 690-802, Korea .</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kim</LastName><ForeName>Jae-Hwan</ForeName><Initials>JH</Initials><AffiliationInfo><Affiliation>Gangwon Provincial Livestock Research Center, Hoengseong, Gangwon 225-831, Korea .</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Korea (South)</Country><MedlineTA>Asian-Australas J Anim Sci</MedlineTA><NlmUniqueID>9884245</NlmUniqueID><ISSNLinking>1011-2367</ISSNLinking></MedlineJournalInfo><OtherID Source="NLM">PMC4213698</OtherID><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Genetic Diversity</Keyword><Keyword MajorTopicYN="N">Korean Native Cattle Breeds</Keyword><Keyword MajorTopicYN="N">Microsatellite</Keyword><Keyword MajorTopicYN="N">Relationships</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2014</Year><Month>06</Month><Day>12</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2014</Year><Month>08</Month><Day>27</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>09</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>11</Month><Day>1</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>11</Month><Day>2</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2014</Year><Month>11</Month><Day>2</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">25358313</ArticleId><ArticleId IdType="doi">10.5713/ajas.2014.14435</ArticleId><ArticleId IdType="pii">ajas-27-11-1548</ArticleId><ArticleId IdType="pmc">PMC4213698</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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