International crop information system for germplasm data management.
Identifieur interne : 000371 ( PubMed/Corpus ); précédent : 000370; suivant : 000372International crop information system for germplasm data management.
Auteurs : Arllet Portugal ; Ranjan Balachandra ; Thomas Metz ; Richard Bruskiewich ; Graham MclarenSource :
- Methods in molecular biology (Clifton, N.J.) [ 1064-3745 ] ; 2007.
English descriptors
- KwdEn :
- MESH :
- genetics : Crops, Agricultural.
- methods : Computational Biology.
- Database Management Systems, Databases, Genetic, International Cooperation, Software.
Abstract
Passport and phenotypic data on germplasm and breeding lines are available from worldwide sources in various electronic formats. These data can be collated into a single database format to enable strategic interrogation to make the best use of data for effective germplasm use and enhancement. The International Crop Information System (http://www.icis.cgiar.org) is an open-source project under development by a global community of crop researchers and includes applications designed to achieve the storage and interrogation of pedigree and phenotypic data.
PubMed: 18287707
Links to Exploration step
pubmed:18287707Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">International crop information system for germplasm data management.</title><author><name sortKey="Portugal, Arllet" sort="Portugal, Arllet" uniqKey="Portugal A" first="Arllet" last="Portugal">Arllet Portugal</name><affiliation><nlm:affiliation>International Rice Research Institute, Metro Manila, Philippines.</nlm:affiliation></affiliation></author><author><name sortKey="Balachandra, Ranjan" sort="Balachandra, Ranjan" uniqKey="Balachandra R" first="Ranjan" last="Balachandra">Ranjan Balachandra</name></author><author><name sortKey="Metz, Thomas" sort="Metz, Thomas" uniqKey="Metz T" first="Thomas" last="Metz">Thomas Metz</name></author><author><name sortKey="Bruskiewich, Richard" sort="Bruskiewich, Richard" uniqKey="Bruskiewich R" first="Richard" last="Bruskiewich">Richard Bruskiewich</name></author><author><name sortKey="Mclaren, Graham" sort="Mclaren, Graham" uniqKey="Mclaren G" first="Graham" last="Mclaren">Graham Mclaren</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2007">2007</date><idno type="RBID">pubmed:18287707</idno><idno type="pmid">18287707</idno><idno type="wicri:Area/PubMed/Corpus">000371</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000371</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">International crop information system for germplasm data management.</title><author><name sortKey="Portugal, Arllet" sort="Portugal, Arllet" uniqKey="Portugal A" first="Arllet" last="Portugal">Arllet Portugal</name><affiliation><nlm:affiliation>International Rice Research Institute, Metro Manila, Philippines.</nlm:affiliation></affiliation></author><author><name sortKey="Balachandra, Ranjan" sort="Balachandra, Ranjan" uniqKey="Balachandra R" first="Ranjan" last="Balachandra">Ranjan Balachandra</name></author><author><name sortKey="Metz, Thomas" sort="Metz, Thomas" uniqKey="Metz T" first="Thomas" last="Metz">Thomas Metz</name></author><author><name sortKey="Bruskiewich, Richard" sort="Bruskiewich, Richard" uniqKey="Bruskiewich R" first="Richard" last="Bruskiewich">Richard Bruskiewich</name></author><author><name sortKey="Mclaren, Graham" sort="Mclaren, Graham" uniqKey="Mclaren G" first="Graham" last="Mclaren">Graham Mclaren</name></author></analytic><series><title level="j">Methods in molecular biology (Clifton, N.J.)</title><idno type="ISSN">1064-3745</idno><imprint><date when="2007" type="published">2007</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Computational Biology (methods)</term><term>Crops, Agricultural (genetics)</term><term>Database Management Systems</term><term>Databases, Genetic</term><term>International Cooperation</term><term>Software</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Crops, Agricultural</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Computational Biology</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Database Management Systems</term><term>Databases, Genetic</term><term>International Cooperation</term><term>Software</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Passport and phenotypic data on germplasm and breeding lines are available from worldwide sources in various electronic formats. These data can be collated into a single database format to enable strategic interrogation to make the best use of data for effective germplasm use and enhancement. The International Crop Information System (http://www.icis.cgiar.org) is an open-source project under development by a global community of crop researchers and includes applications designed to achieve the storage and interrogation of pedigree and phenotypic data.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18287707</PMID><DateCreated><Year>2008</Year><Month>02</Month><Day>21</Day></DateCreated><DateCompleted><Year>2009</Year><Month>01</Month><Day>12</Day></DateCompleted><DateRevised><Year>2008</Year><Month>02</Month><Day>21</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">1064-3745</ISSN><JournalIssue CitedMedium="Print"><Volume>406</Volume><PubDate><Year>2007</Year></PubDate></JournalIssue><Title>Methods in molecular biology (Clifton, N.J.)</Title><ISOAbbreviation>Methods Mol. Biol.</ISOAbbreviation></Journal><ArticleTitle>International crop information system for germplasm data management.</ArticleTitle><Pagination><MedlinePgn>459-71</MedlinePgn></Pagination><Abstract><AbstractText>Passport and phenotypic data on germplasm and breeding lines are available from worldwide sources in various electronic formats. These data can be collated into a single database format to enable strategic interrogation to make the best use of data for effective germplasm use and enhancement. The International Crop Information System (http://www.icis.cgiar.org) is an open-source project under development by a global community of crop researchers and includes applications designed to achieve the storage and interrogation of pedigree and phenotypic data.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Portugal</LastName><ForeName>Arllet</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>International Rice Research Institute, Metro Manila, Philippines.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Balachandra</LastName><ForeName>Ranjan</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Metz</LastName><ForeName>Thomas</ForeName><Initials>T</Initials></Author><Author ValidYN="Y"><LastName>Bruskiewich</LastName><ForeName>Richard</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>McLaren</LastName><ForeName>Graham</ForeName><Initials>G</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Methods Mol Biol</MedlineTA><NlmUniqueID>9214969</NlmUniqueID><ISSNLinking>1064-3745</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D019295" MajorTopicYN="N">Computational Biology</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018556" MajorTopicYN="N">Crops, Agricultural</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D003628" MajorTopicYN="N">Database Management Systems</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D030541" MajorTopicYN="Y">Databases, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007391" MajorTopicYN="N">International Cooperation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012984" MajorTopicYN="Y">Software</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2008</Year><Month>2</Month><Day>22</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2009</Year><Month>1</Month><Day>13</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2008</Year><Month>2</Month><Day>22</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">18287707</ArticleId><ArticleId IdType="pii">1-59745-535-0:459</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Agronomie/explor/SisAgriV1/Data/PubMed/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000371 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 000371 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Agronomie
|area= SisAgriV1
|flux= PubMed
|étape= Corpus
|type= RBID
|clé= pubmed:18287707
|texte= International crop information system for germplasm data management.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i -Sk "pubmed:18287707" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd \
| NlmPubMed2Wicri -a SisAgriV1
| This area was generated with Dilib version V0.6.28. |  |