Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers.
Identifieur interne : 000037 ( PubMed/Corpus ); précédent : 000036; suivant : 000038Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers.
Auteurs : Olivier Ribolzi ; Emma Rochelle-Newall ; Sabine Dittrich ; Yves Auda ; Paul N. Newton ; Sayaphet Rattanavong ; Michael Knappik ; Bounsamai Soulileuth ; Oloth Sengtaheuanghoung ; David A B. Dance ; Alain PierretSource :
- Environmental science and pollution research international [ 1614-7499 ] ; 2016.
Abstract
Burkholderia pseudomallei is the bacterium that causes melioidosis in humans. While B. pseudomallei is known to be endemic in South East Asia (SEA), the occurrence of the disease in other parts of the tropics points towards a potentially large global distribution. We investigated the environmental factors that influence the presence (and absence) of B. pseudomallei in a tropical watershed in SEA. Our main objective was to determine whether there is a link between the presence of the organism in the hydrographic network and the upstream soil and land-use type. The presence of B. pseudomallei was determined using a specific quantitative real-time PCR assay following enrichment culture. Land use, soil, geomorphology, and environmental data were then analyzed using partial least squares discriminant analysis (PLSDA) to compare the B. pseudomallei positive and negative sites. Soil type in the surrounding catchment and turbidity had a strong positive influence on the presence (acrisols and luvisols) or absence (ferralsols) of B. pseudomallei. Given the strong apparent links between soil characteristics, water turbidity, and the presence/absence of B. pseudomallei, actions to raise public awareness about factors increasing the risk of exposure should be undertaken in order to reduce the incidence of melioidosis in regions of endemicity.
DOI: 10.1007/s11356-015-5943-z
PubMed: 26758304
Links to Exploration step
pubmed:26758304Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers.</title><author><name sortKey="Ribolzi, Olivier" sort="Ribolzi, Olivier" uniqKey="Ribolzi O" first="Olivier" last="Ribolzi">Olivier Ribolzi</name><affiliation><nlm:affiliation>Géosciences Environnement Toulouse (GET), UMR 5563, (IRD, CNRS, UPS), Université de Toulouse, UPS (OMP), CNRS, Toulouse, France. olivier.ribolzi@ird.fr.</nlm:affiliation></affiliation></author><author><name sortKey="Rochelle Newall, Emma" sort="Rochelle Newall, Emma" uniqKey="Rochelle Newall E" first="Emma" last="Rochelle-Newall">Emma Rochelle-Newall</name><affiliation><nlm:affiliation>iEES-Paris (IRD-UPMC-CNRS-INRA-UDD-UPEC), Sorbonne Universités, UPMC Univ Paris 06, Institut de Recherche pour le Développement (IRD), case 23, 4 place Jussieu, Paris cedex, 75252, France.</nlm:affiliation></affiliation></author><author><name sortKey="Dittrich, Sabine" sort="Dittrich, Sabine" uniqKey="Dittrich S" first="Sabine" last="Dittrich">Sabine Dittrich</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Auda, Yves" sort="Auda, Yves" uniqKey="Auda Y" first="Yves" last="Auda">Yves Auda</name><affiliation><nlm:affiliation>Géosciences Environnement Toulouse (GET), UMR 5563, (IRD, CNRS, UPS), Université de Toulouse, UPS (OMP), CNRS, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Newton, Paul N" sort="Newton, Paul N" uniqKey="Newton P" first="Paul N" last="Newton">Paul N. Newton</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Rattanavong, Sayaphet" sort="Rattanavong, Sayaphet" uniqKey="Rattanavong S" first="Sayaphet" last="Rattanavong">Sayaphet Rattanavong</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Knappik, Michael" sort="Knappik, Michael" uniqKey="Knappik M" first="Michael" last="Knappik">Michael Knappik</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Soulileuth, Bounsamai" sort="Soulileuth, Bounsamai" uniqKey="Soulileuth B" first="Bounsamai" last="Soulileuth">Bounsamai Soulileuth</name><affiliation><nlm:affiliation>Institute of Ecology and Environmental Science-Paris, Institut de Recherche pour le Développement (IRD), Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Sengtaheuanghoung, Oloth" sort="Sengtaheuanghoung, Oloth" uniqKey="Sengtaheuanghoung O" first="Oloth" last="Sengtaheuanghoung">Oloth Sengtaheuanghoung</name><affiliation><nlm:affiliation>Department of Agricultural Land Management (DALaM), P.O. Box 4199, Ban Nogviengkham, Xaythany District, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Dance, David A B" sort="Dance, David A B" uniqKey="Dance D" first="David A B" last="Dance">David A B. Dance</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Pierret, Alain" sort="Pierret, Alain" uniqKey="Pierret A" first="Alain" last="Pierret">Alain Pierret</name><affiliation><nlm:affiliation>Institute of Ecology and Environmental Science-Paris, Institut de Recherche pour le Développement (IRD), Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2016">2016</date><idno type="RBID">pubmed:26758304</idno><idno type="pmid">26758304</idno><idno type="doi">10.1007/s11356-015-5943-z</idno><idno type="wicri:Area/PubMed/Corpus">000037</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000037</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers.</title><author><name sortKey="Ribolzi, Olivier" sort="Ribolzi, Olivier" uniqKey="Ribolzi O" first="Olivier" last="Ribolzi">Olivier Ribolzi</name><affiliation><nlm:affiliation>Géosciences Environnement Toulouse (GET), UMR 5563, (IRD, CNRS, UPS), Université de Toulouse, UPS (OMP), CNRS, Toulouse, France. olivier.ribolzi@ird.fr.</nlm:affiliation></affiliation></author><author><name sortKey="Rochelle Newall, Emma" sort="Rochelle Newall, Emma" uniqKey="Rochelle Newall E" first="Emma" last="Rochelle-Newall">Emma Rochelle-Newall</name><affiliation><nlm:affiliation>iEES-Paris (IRD-UPMC-CNRS-INRA-UDD-UPEC), Sorbonne Universités, UPMC Univ Paris 06, Institut de Recherche pour le Développement (IRD), case 23, 4 place Jussieu, Paris cedex, 75252, France.</nlm:affiliation></affiliation></author><author><name sortKey="Dittrich, Sabine" sort="Dittrich, Sabine" uniqKey="Dittrich S" first="Sabine" last="Dittrich">Sabine Dittrich</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Auda, Yves" sort="Auda, Yves" uniqKey="Auda Y" first="Yves" last="Auda">Yves Auda</name><affiliation><nlm:affiliation>Géosciences Environnement Toulouse (GET), UMR 5563, (IRD, CNRS, UPS), Université de Toulouse, UPS (OMP), CNRS, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Newton, Paul N" sort="Newton, Paul N" uniqKey="Newton P" first="Paul N" last="Newton">Paul N. Newton</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Rattanavong, Sayaphet" sort="Rattanavong, Sayaphet" uniqKey="Rattanavong S" first="Sayaphet" last="Rattanavong">Sayaphet Rattanavong</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Knappik, Michael" sort="Knappik, Michael" uniqKey="Knappik M" first="Michael" last="Knappik">Michael Knappik</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Soulileuth, Bounsamai" sort="Soulileuth, Bounsamai" uniqKey="Soulileuth B" first="Bounsamai" last="Soulileuth">Bounsamai Soulileuth</name><affiliation><nlm:affiliation>Institute of Ecology and Environmental Science-Paris, Institut de Recherche pour le Développement (IRD), Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Sengtaheuanghoung, Oloth" sort="Sengtaheuanghoung, Oloth" uniqKey="Sengtaheuanghoung O" first="Oloth" last="Sengtaheuanghoung">Oloth Sengtaheuanghoung</name><affiliation><nlm:affiliation>Department of Agricultural Land Management (DALaM), P.O. Box 4199, Ban Nogviengkham, Xaythany District, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Dance, David A B" sort="Dance, David A B" uniqKey="Dance D" first="David A B" last="Dance">David A B. Dance</name><affiliation><nlm:affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Pierret, Alain" sort="Pierret, Alain" uniqKey="Pierret A" first="Alain" last="Pierret">Alain Pierret</name><affiliation><nlm:affiliation>Institute of Ecology and Environmental Science-Paris, Institut de Recherche pour le Développement (IRD), Vientiane, Lao People's Democratic Republic.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Environmental science and pollution research international</title><idno type="eISSN">1614-7499</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Burkholderia pseudomallei is the bacterium that causes melioidosis in humans. While B. pseudomallei is known to be endemic in South East Asia (SEA), the occurrence of the disease in other parts of the tropics points towards a potentially large global distribution. We investigated the environmental factors that influence the presence (and absence) of B. pseudomallei in a tropical watershed in SEA. Our main objective was to determine whether there is a link between the presence of the organism in the hydrographic network and the upstream soil and land-use type. The presence of B. pseudomallei was determined using a specific quantitative real-time PCR assay following enrichment culture. Land use, soil, geomorphology, and environmental data were then analyzed using partial least squares discriminant analysis (PLSDA) to compare the B. pseudomallei positive and negative sites. Soil type in the surrounding catchment and turbidity had a strong positive influence on the presence (acrisols and luvisols) or absence (ferralsols) of B. pseudomallei. Given the strong apparent links between soil characteristics, water turbidity, and the presence/absence of B. pseudomallei, actions to raise public awareness about factors increasing the risk of exposure should be undertaken in order to reduce the incidence of melioidosis in regions of endemicity.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">26758304</PMID><DateCreated><Year>2016</Year><Month>04</Month><Day>27</Day></DateCreated><DateRevised><Year>2017</Year><Month>02</Month><Day>08</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1614-7499</ISSN><JournalIssue CitedMedium="Internet"><Volume>23</Volume><Issue>8</Issue><PubDate><Year>2016</Year><Month>Apr</Month></PubDate></JournalIssue><Title>Environmental science and pollution research international</Title><ISOAbbreviation>Environ Sci Pollut Res Int</ISOAbbreviation></Journal><ArticleTitle>Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers.</ArticleTitle><Pagination><MedlinePgn>7828-39</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s11356-015-5943-z</ELocationID><Abstract><AbstractText>Burkholderia pseudomallei is the bacterium that causes melioidosis in humans. While B. pseudomallei is known to be endemic in South East Asia (SEA), the occurrence of the disease in other parts of the tropics points towards a potentially large global distribution. We investigated the environmental factors that influence the presence (and absence) of B. pseudomallei in a tropical watershed in SEA. Our main objective was to determine whether there is a link between the presence of the organism in the hydrographic network and the upstream soil and land-use type. The presence of B. pseudomallei was determined using a specific quantitative real-time PCR assay following enrichment culture. Land use, soil, geomorphology, and environmental data were then analyzed using partial least squares discriminant analysis (PLSDA) to compare the B. pseudomallei positive and negative sites. Soil type in the surrounding catchment and turbidity had a strong positive influence on the presence (acrisols and luvisols) or absence (ferralsols) of B. pseudomallei. Given the strong apparent links between soil characteristics, water turbidity, and the presence/absence of B. pseudomallei, actions to raise public awareness about factors increasing the risk of exposure should be undertaken in order to reduce the incidence of melioidosis in regions of endemicity.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ribolzi</LastName><ForeName>Olivier</ForeName><Initials>O</Initials><AffiliationInfo><Affiliation>Géosciences Environnement Toulouse (GET), UMR 5563, (IRD, CNRS, UPS), Université de Toulouse, UPS (OMP), CNRS, Toulouse, France. olivier.ribolzi@ird.fr.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rochelle-Newall</LastName><ForeName>Emma</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>iEES-Paris (IRD-UPMC-CNRS-INRA-UDD-UPEC), Sorbonne Universités, UPMC Univ Paris 06, Institut de Recherche pour le Développement (IRD), case 23, 4 place Jussieu, Paris cedex, 75252, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dittrich</LastName><ForeName>Sabine</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Auda</LastName><ForeName>Yves</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Géosciences Environnement Toulouse (GET), UMR 5563, (IRD, CNRS, UPS), Université de Toulouse, UPS (OMP), CNRS, Toulouse, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Newton</LastName><ForeName>Paul N</ForeName><Initials>PN</Initials><AffiliationInfo><Affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rattanavong</LastName><ForeName>Sayaphet</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Knappik</LastName><ForeName>Michael</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Soulileuth</LastName><ForeName>Bounsamai</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Institute of Ecology and Environmental Science-Paris, Institut de Recherche pour le Développement (IRD), Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sengtaheuanghoung</LastName><ForeName>Oloth</ForeName><Initials>O</Initials><AffiliationInfo><Affiliation>Department of Agricultural Land Management (DALaM), P.O. Box 4199, Ban Nogviengkham, Xaythany District, Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dance</LastName><ForeName>David A B</ForeName><Initials>DA</Initials><AffiliationInfo><Affiliation>Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pierret</LastName><ForeName>Alain</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Institute of Ecology and Environmental Science-Paris, Institut de Recherche pour le Développement (IRD), Vientiane, Lao People's Democratic Republic.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>01</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Environ Sci Pollut Res Int</MedlineTA><NlmUniqueID>9441769</NlmUniqueID><ISSNLinking>0944-1344</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Emerg Infect Dis. 2014 Feb;20(2):265-8</RefSource><PMID Version="1">24447771</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Microbiol. 2014 Feb;91(4):805-20</RefSource><PMID Version="1">24354890</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Rev Microbiol. 2014 Dec;12(12):797-808</RefSource><PMID Version="1">25329406</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>ISME J. 2015 Mar;9(3):721-34</RefSource><PMID Version="1">25171335</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS Negl Trop Dis. 2015 Mar;9(3):e0003635</RefSource><PMID Version="1">25803046</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Environ Microbiol. 2015 Jun;81(11):3722-7</RefSource><PMID Version="1">25819969</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS One. 2015;10(9):e0138953</RefSource><PMID Version="1">26398904</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Environ Sci Pollut Res Int. 2016 Feb;23(4):3427-35</RefSource><PMID Version="1">26490918</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Am J Trop Med Hyg. 2001 Sep;65(3):177-9</RefSource><PMID Version="1">11561699</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Acta Trop. 2001 Dec 21;80(3):237-44</RefSource><PMID Version="1">11700181</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Clin Microbiol Rev. 1991 Jan;4(1):52-60</RefSource><PMID Version="1">2004347</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Annu Rev Microbiol. 1994;48:743-72</RefSource><PMID Version="1">7826025</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Biol Chem. 1995 Nov 10;270(45):26723-6</RefSource><PMID Version="1">7592901</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Clin Microbiol. 2005 Feb;43(2):970-2</RefSource><PMID Version="1">15695721</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Clin Microbiol Rev. 2005 Apr;18(2):383-416</RefSource><PMID Version="1">15831829</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS Comput Biol. 2005 Oct;1(5):e55</RefSource><PMID Version="1">16261196</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Clin Microbiol. 2006 Jan;44(1):85-90</RefSource><PMID Version="1">16390953</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Med Microbiol. 2006 Jun;55(Pt 6):661-8</RefSource><PMID Version="1">16687582</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Trans R Soc Trop Med Hyg. 2008 Dec;102 Suppl 1:S1-4</RefSource><PMID Version="1">19121666</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Trans R Soc Trop Med Hyg. 2008 Dec;102 Suppl 1:S5-9</RefSource><PMID Version="1">19121688</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS Negl Trop Dis. 2010;4(6):e694</RefSource><PMID Version="1">20532233</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Environ Microbiol. 2010 Aug;76(15):5305-7</RefSource><PMID Version="1">20543039</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Environ Microbiol. 2011 Jan;77(2):532-6</RefSource><PMID Version="1">21075883</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Emerg Infect Dis. 2011 Jul;17(7):1322-4</RefSource><PMID Version="1">21762606</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Environ Microbiol. 2011 Oct;77(20):7243-6</RefSource><PMID Version="1">21873480</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Am J Trop Med Hyg. 2012 May;86(5):872-7</RefSource><PMID Version="1">22556090</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS Negl Trop Dis. 2012;6(6):e1715</RefSource><PMID Version="1">22745846</PMID></CommentsCorrections></CommentsCorrectionsList><OtherID Source="NLM">PMC4846699</OtherID><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Acrisols</Keyword><Keyword MajorTopicYN="N">Ferralsols</Keyword><Keyword MajorTopicYN="N">Geographical information system (GIS)</Keyword><Keyword MajorTopicYN="N">Melioidosis</Keyword><Keyword MajorTopicYN="N">Partial least squares discriminant analysis (PLSDA)</Keyword><Keyword MajorTopicYN="N">South East Asia</Keyword><Keyword MajorTopicYN="N">Turbidity of river water</Keyword><Keyword MajorTopicYN="N">Watershed</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2015</Year><Month>10</Month><Day>15</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>12</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>1</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>1</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2016</Year><Month>1</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">26758304</ArticleId><ArticleId IdType="doi">10.1007/s11356-015-5943-z</ArticleId><ArticleId IdType="pii">10.1007/s11356-015-5943-z</ArticleId><ArticleId IdType="pmc">PMC4846699</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Agronomie/explor/SisAgriV1/Data/PubMed/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000037 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 000037 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Agronomie
|area= SisAgriV1
|flux= PubMed
|étape= Corpus
|type= RBID
|clé= pubmed:26758304
|texte= Land use and soil type determine the presence of the pathogen Burkholderia pseudomallei in tropical rivers.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i -Sk "pubmed:26758304" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd \
| NlmPubMed2Wicri -a SisAgriV1
| This area was generated with Dilib version V0.6.28. |  |