AGRIS: providing access to agricultural research data exploiting open data on the web
Identifieur interne : 000068 ( Pmc/Checkpoint ); précédent : 000067; suivant : 000069AGRIS: providing access to agricultural research data exploiting open data on the web
Auteurs : Fabrizio Celli [Italie] ; Thembani Malapela [Italie] ; Karna Wegner [Italie] ; Imma Subirats [Italie] ; Elena Kokoliou [Grèce] ; Johannes Keizer [Italie]Source :
- F1000Research [ 2046-1402 ] ; 2015.
Abstract
AGRIS is the International System for Agricultural Science and Technology. It is supported by a large community of data providers, partners and users. AGRIS is a database that aggregates bibliographic data, and through this core data, related content across online information systems is retrieved by taking advantage of Semantic Web capabilities. AGRIS is a global public good and its vision is to be a responsive service to its user needs by facilitating contributions and feedback regarding the AGRIS core knowledgebase, AGRIS’s future and its continuous development. Periodic AGRIS e-consultations, partner meetings and user feedback are assimilated to the development of the AGRIS application and content coverage. This paper outlines the current AGRIS technical set-up, its network of partners, data providers and users as well as how AGRIS’s responsiveness to clients’ needs inspires the continuous technical development of the application. The paper concludes by providing a use case of how the AGRIS stakeholder input and the subsequent AGRIS e-consultation results influence the development of the AGRIS application, knowledgebase and service delivery.
Url:
DOI: 10.12688/f1000research.6354.1
PubMed: 26339471
PubMed Central: 4544375
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
PMC:4544375Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">AGRIS: providing access to agricultural research data exploiting open data on the web</title><author><name sortKey="Celli, Fabrizio" sort="Celli, Fabrizio" uniqKey="Celli F" first="Fabrizio" last="Celli">Fabrizio Celli</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Malapela, Thembani" sort="Malapela, Thembani" uniqKey="Malapela T" first="Thembani" last="Malapela">Thembani Malapela</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Wegner, Karna" sort="Wegner, Karna" uniqKey="Wegner K" first="Karna" last="Wegner">Karna Wegner</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Subirats, Imma" sort="Subirats, Imma" uniqKey="Subirats I" first="Imma" last="Subirats">Imma Subirats</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Kokoliou, Elena" sort="Kokoliou, Elena" uniqKey="Kokoliou E" first="Elena" last="Kokoliou">Elena Kokoliou</name><affiliation wicri:level="1"><nlm:aff id="a2">Agro-Know, Vrilissia, 152 36, Greece</nlm:aff><country xml:lang="fr">Grèce</country><wicri:regionArea>Agro-Know, Vrilissia, 152 36</wicri:regionArea><wicri:noRegion>152 36</wicri:noRegion></affiliation></author><author><name sortKey="Keizer, Johannes" sort="Keizer, Johannes" uniqKey="Keizer J" first="Johannes" last="Keizer">Johannes Keizer</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26339471</idno><idno type="pmc">4544375</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4544375</idno><idno type="RBID">PMC:4544375</idno><idno type="doi">10.12688/f1000research.6354.1</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000002</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000002</idno><idno type="wicri:Area/Pmc/Curation">000002</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000002</idno><idno type="wicri:Area/Pmc/Checkpoint">000068</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000068</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">AGRIS: providing access to agricultural research data exploiting open data on the web</title><author><name sortKey="Celli, Fabrizio" sort="Celli, Fabrizio" uniqKey="Celli F" first="Fabrizio" last="Celli">Fabrizio Celli</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Malapela, Thembani" sort="Malapela, Thembani" uniqKey="Malapela T" first="Thembani" last="Malapela">Thembani Malapela</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Wegner, Karna" sort="Wegner, Karna" uniqKey="Wegner K" first="Karna" last="Wegner">Karna Wegner</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Subirats, Imma" sort="Subirats, Imma" uniqKey="Subirats I" first="Imma" last="Subirats">Imma Subirats</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author><author><name sortKey="Kokoliou, Elena" sort="Kokoliou, Elena" uniqKey="Kokoliou E" first="Elena" last="Kokoliou">Elena Kokoliou</name><affiliation wicri:level="1"><nlm:aff id="a2">Agro-Know, Vrilissia, 152 36, Greece</nlm:aff><country xml:lang="fr">Grèce</country><wicri:regionArea>Agro-Know, Vrilissia, 152 36</wicri:regionArea><wicri:noRegion>152 36</wicri:noRegion></affiliation></author><author><name sortKey="Keizer, Johannes" sort="Keizer, Johannes" uniqKey="Keizer J" first="Johannes" last="Keizer">Johannes Keizer</name><affiliation wicri:level="1"><nlm:aff id="a1">Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153</wicri:regionArea><wicri:noRegion>00153</wicri:noRegion></affiliation></author></analytic><series><title level="j">F1000Research</title><idno type="eISSN">2046-1402</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>AGRIS is the International System for Agricultural Science and Technology. It is supported by a large community of data providers, partners and users. AGRIS is a database that aggregates bibliographic data, and through this core data, related content across online information systems is retrieved by taking advantage of Semantic Web capabilities. AGRIS is a global public good and its vision is to be a responsive service to its user needs by facilitating contributions and feedback regarding the AGRIS core knowledgebase, AGRIS’s future and its continuous development. Periodic AGRIS e-consultations, partner meetings and user feedback are assimilated to the development of the AGRIS application and content coverage. This paper outlines the current AGRIS technical set-up, its network of partners, data providers and users as well as how AGRIS’s responsiveness to clients’ needs inspires the continuous technical development of the application. The paper concludes by providing a use case of how the AGRIS stakeholder input and the subsequent AGRIS e-consultation results influence the development of the AGRIS application, knowledgebase and service delivery.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Gueret, C" uniqKey="Gueret C">C Gueret</name></author><author><name sortKey="Boyera, S" uniqKey="Boyera S">S Boyera</name></author><author><name sortKey="Powell, M" uniqKey="Powell M">M Powell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gayo, Jel" uniqKey="Gayo J">JEL Gayo</name></author><author><name sortKey="Kontokostas, D" uniqKey="Kontokostas D">D Kontokostas</name></author><author><name sortKey="Auer, S" uniqKey="Auer S">S Auer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bauer, F" uniqKey="Bauer F">F Bauer</name></author><author><name sortKey="Kaltenbock, M" uniqKey="Kaltenbock M">M Kaltenböck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zuiderwijk, A" uniqKey="Zuiderwijk A">A Zuiderwijk</name></author><author><name sortKey="Jeffery, K" uniqKey="Jeffery K">K Jeffery</name></author><author><name sortKey="Janssen, M" uniqKey="Janssen M">M Janssen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zaveri, A" uniqKey="Zaveri A">A Zaveri</name></author><author><name sortKey="Rula, A" uniqKey="Rula A">A Rula</name></author><author><name sortKey="Maurino, A" uniqKey="Maurino A">A Maurino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Caracciolo, C" uniqKey="Caracciolo C">C Caracciolo</name></author><author><name sortKey="Stellato, A" uniqKey="Stellato A">A Stellato</name></author><author><name sortKey="Morshed, A" uniqKey="Morshed A">A Morshed</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Anibaldi, S" uniqKey="Anibaldi S">S Anibaldi</name></author><author><name sortKey="Jaques, Y" uniqKey="Jaques Y">Y Jaques</name></author><author><name sortKey="Celli, F" uniqKey="Celli F">F Celli</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rodriguez, Jm" uniqKey="Rodriguez J">JM Rodríguez</name></author><author><name sortKey="Clement, Aj" uniqKey="Clement A">AJ Clement</name></author><author><name sortKey="Farhan, H" uniqKey="Farhan H">H Farhan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Celli, F" uniqKey="Celli F">F Celli</name></author><author><name sortKey="Jaques, Y" uniqKey="Jaques Y">Y Jaques</name></author><author><name sortKey="Anibaldi, S" uniqKey="Anibaldi S">S Anibaldi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Turpin, A" uniqKey="Turpin A">A Turpin</name></author><author><name sortKey="Scholer, F" uniqKey="Scholer F">F Scholer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jaques, Y" uniqKey="Jaques Y">Y Jaques</name></author><author><name sortKey="Anibaldi, S" uniqKey="Anibaldi S">S Anibaldi</name></author><author><name sortKey="Celli, F" uniqKey="Celli F">F Celli</name></author></analytic></biblStruct></listBibl></div1></back></TEI><pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">F1000Res</journal-id><journal-id journal-id-type="iso-abbrev">F1000Res</journal-id><journal-id journal-id-type="pmc">F1000Research</journal-id><journal-title-group><journal-title>F1000Research</journal-title></journal-title-group><issn pub-type="epub">2046-1402</issn><publisher><publisher-name>F1000Research</publisher-name><publisher-loc>London, UK</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">26339471</article-id><article-id pub-id-type="pmc">4544375</article-id><article-id pub-id-type="doi">10.12688/f1000research.6354.1</article-id><article-categories><subj-group subj-group-type="heading"><subject>Software Tool Article</subject></subj-group><subj-group><subject>Articles</subject><subj-group><subject>Agriculture & Biotechnology</subject></subj-group><subj-group><subject>Bioinformatics</subject></subj-group><subj-group><subject>Community Ecology & Biodiversity</subject></subj-group><subj-group><subject>Data Sharing</subject></subj-group><subj-group><subject>Web and Social Media</subject></subj-group></subj-group></article-categories><title-group><article-title>AGRIS: providing access to agricultural research data exploiting open data on the web</article-title><fn-group content-type="pub-status"><fn><p>v1; ref status: indexed</p></fn></fn-group></title-group><contrib-group><contrib contrib-type="author"><name><surname>Celli</surname><given-names>Fabrizio</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>Malapela</surname><given-names>Thembani</given-names></name><xref ref-type="corresp" rid="c1">a</xref><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>Wegner</surname><given-names>Karna</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>Subirats</surname><given-names>Imma</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>Kokoliou</surname><given-names>Elena</given-names></name><xref ref-type="aff" rid="a2">2</xref></contrib><contrib contrib-type="author"><name><surname>Keizer</surname><given-names>Johannes</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><aff id="a1"><label>1</label>Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, Rome, 00153, Italy</aff><aff id="a2"><label>2</label>Agro-Know, Vrilissia, 152 36, Greece</aff></contrib-group><author-notes><corresp id="c1"><label>a</label><email xlink:href="mailto:thembani.malapela@fao.org">thembani.malapela@fao.org</email></corresp><fn fn-type="con"><p>FC acted as the AGRIS technical lead and decided on the conceptual content, was responsible for technical parts of this paper, contributed
<xref ref-type="other" rid="s2">section 2.0</xref> and
<xref ref-type="other" rid="s3">section 3.0</xref> and was responsible for production of all the images.</p><p>TM acted as corresponding author and coordinated inputs from all sections as well as contributing
<xref ref-type="other" rid="s1">section 1.0</xref> and part of
<xref ref-type="other" rid="s5">section 5.0</xref> and
<xref ref-type="other" rid="s6">section 6.0</xref>, including the literature search. TM also fine-tuned the references and organization of the paper.</p><p>KW contributed to
<xref ref-type="other" rid="s5">section 5.0</xref>, interpreted the survey results and related materials and also contributed the whole AGRIS community section.</p><p>IS provided editorial guidance and edited the paper for appropriateness regarding F1000 guidelines and correctness in discussing metadata related aspects.</p><p>EK is responsible for AGRIS data processing and contributed to
<xref ref-type="other" rid="s5">section 5.0</xref> by providing the analysis of the survey.</p><p>JK made provided guidance as to the title of the paper and direction it took, as well as taking responsibility for this content from FAO’s perspective. JK also reviewed the article and cleared it for publication.</p></fn><fn fn-type="conflict"><p><bold>Competing interests: </bold>No competing interests were declared.</p></fn></author-notes><pub-date pub-type="epub"><day>8</day><month>5</month><year>2015</year></pub-date><pub-date pub-type="collection"><year>2015</year></pub-date><volume>4</volume><elocation-id>110</elocation-id><history><date date-type="accepted"><day>23</day><month>4</month><year>2015</year></date></history><permissions><copyright-statement>Copyright: © 2015 Celli F et al.</copyright-statement><copyright-year>2015</copyright-year><license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p></license></permissions><self-uri content-type="pdf" xlink:type="simple" xlink:href="f1000research-4-6813.pdf"></self-uri><abstract><p>AGRIS is the International System for Agricultural Science and Technology. It is supported by a large community of data providers, partners and users. AGRIS is a database that aggregates bibliographic data, and through this core data, related content across online information systems is retrieved by taking advantage of Semantic Web capabilities. AGRIS is a global public good and its vision is to be a responsive service to its user needs by facilitating contributions and feedback regarding the AGRIS core knowledgebase, AGRIS’s future and its continuous development. Periodic AGRIS e-consultations, partner meetings and user feedback are assimilated to the development of the AGRIS application and content coverage. This paper outlines the current AGRIS technical set-up, its network of partners, data providers and users as well as how AGRIS’s responsiveness to clients’ needs inspires the continuous technical development of the application. The paper concludes by providing a use case of how the AGRIS stakeholder input and the subsequent AGRIS e-consultation results influence the development of the AGRIS application, knowledgebase and service delivery.</p></abstract><kwd-group kwd-group-type="author"><kwd>Semantic Web</kwd><kwd>Linked Open Data</kwd><kwd>AGRIS community</kwd><kwd>agriculture</kwd><kwd>agricultural data</kwd></kwd-group><funding-group><award-group id="fund-1"><funding-source>agInfra: A data infrastructure to support agricultural scientific Communities</funding-source><award-id>283770</award-id></award-group><funding-statement>The work described in this article was partly funded by the EC project “agInfra: A data infrastructure to support agricultural scientific Communities”, Grant agreement no: 283770.</funding-statement></funding-group></article-meta></front><sub-article id="report9982" article-type="peer-review"><front-stub><article-id pub-id-type="doi">10.5256/f1000research.6813.r9982</article-id><title-group><article-title>Referee response for version 1</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Davey</surname><given-names>Robert</given-names></name><xref ref-type="aff" rid="r9982a1">1</xref><role>Referee</role></contrib><aff id="r9982a1"><label>1</label>The Genome Analysis Centre, Norwich, UK</aff></contrib-group><author-notes><fn fn-type="conflict"><p><bold>Competing interests: </bold>No competing interests were disclosed.</p></fn></author-notes><pub-date pub-type="epub"><day>18</day><month>8</month><year>2015</year></pub-date><related-article id="d35e949" related-article-type="peer-reviewed-article" ext-link-type="doi" xlink:href="10.12688/f1000research.6354.1">Version </related-article><custom-meta-group><custom-meta><meta-name>recommendation</meta-name><meta-value>approve</meta-value></custom-meta></custom-meta-group></front-stub><body><p>I, Robert Davey (TGAC, UK)
<list list-type="bullet"><list-item><p>will sign my name to my review</p></list-item><list-item><p>will review with integrity</p></list-item><list-item><p>will treat the review as a discourse with you; in particular, I will provide constructive criticism</p></list-item><list-item><p>will be an ambassador for the practice of open science</p></list-item></list></p><p>The authors describe AGRIS, a metadata repository for an impressive cohort of bibliographic linked open data in the agricultural sciences.</p><p>Managing large-scale data generative approaches ("big"/heterogeneous data) is only one side of the coin in the modern research era. With so much data available now (and this is only going to get worse), we need systems like AGRIS to make sense of the descriptions of data to ensure that researchers can find and reuse findings more easily, and more importantly integrate them into their own work.</p><p>Whilst I too found the AGROVOC system to be a little slow and unresponsive, the AGRIS portal is relatively fast which shows the underlying power of the linked datasets, which the mashup interface represents nicely. I did attempt to use the LOD Live portion of the site, but all of the resources I tried to visualise came up with the "no resource endpoint configured". I'm not sure if this is a factor of the actual resource itself, or an issue with the query mechanism. Could the authors give some working examples?</p><p>The paper mentions the use of Lucene, but are detailed technical documents about the software implementations that power the website available? Likewise, is there any relevant source code that would be suitable for release to the community? If so, links to this information might be useful.</p><p>The paper reads well, and gives some insight into how such a platform is built, assessed and used. The ability to search for terms in multiple languages is something that is incredibly important, and should be commended.</p><p>My only minor comments for revision would be that:
<list list-type="bullet"><list-item><p>the term "mashup" might not be well understood by many. A short description or refactoring of the term might add some clarity.</p></list-item><list-item><p>I don't see the benefit of the 1.0, 2.0, etc section names. There are no subsections, so the article doesn't really need the ordered list style.</p></list-item></list></p><p>I have read this submission. I believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p></body></sub-article><sub-article id="report8691" article-type="peer-review"><front-stub><article-id pub-id-type="doi">10.5256/f1000research.6813.r8691</article-id><title-group><article-title>Referee response for version 1</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Privalle</surname><given-names>Laura</given-names></name><xref ref-type="aff" rid="r8691a1">1</xref><role>Referee</role></contrib><aff id="r8691a1"><label>1</label>Regulatory Science Seeds and Traits Innovation Center, Bayer CropScience LP R&D, Morrisville, NC, USA</aff></contrib-group><author-notes><fn fn-type="conflict"><p><bold>Competing interests: </bold>No competing interests were disclosed.</p></fn></author-notes><pub-date pub-type="epub"><day>18</day><month>5</month><year>2015</year></pub-date><related-article id="d35e1031" related-article-type="peer-reviewed-article" ext-link-type="doi" xlink:href="10.12688/f1000research.6354.1">Version </related-article><custom-meta-group><custom-meta><meta-name>recommendation</meta-name><meta-value>approve</meta-value></custom-meta></custom-meta-group></front-stub><body><p>This is an informative article on the availability of a potentially very useful software tool of which I was not previously aware. The article presents clear examples of how to use the tool and the value it brings to the user. Others will be equally interested to learn of this website.</p><p>I have read this submission. I believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p></body></sub-article></pmc><affiliations><list><country><li>Grèce</li><li>Italie</li></country></list><tree><country name="Italie"><noRegion><name sortKey="Celli, Fabrizio" sort="Celli, Fabrizio" uniqKey="Celli F" first="Fabrizio" last="Celli">Fabrizio Celli</name></noRegion><name sortKey="Keizer, Johannes" sort="Keizer, Johannes" uniqKey="Keizer J" first="Johannes" last="Keizer">Johannes Keizer</name><name sortKey="Malapela, Thembani" sort="Malapela, Thembani" uniqKey="Malapela T" first="Thembani" last="Malapela">Thembani Malapela</name><name sortKey="Subirats, Imma" sort="Subirats, Imma" uniqKey="Subirats I" first="Imma" last="Subirats">Imma Subirats</name><name sortKey="Wegner, Karna" sort="Wegner, Karna" uniqKey="Wegner K" first="Karna" last="Wegner">Karna Wegner</name></country><country name="Grèce"><noRegion><name sortKey="Kokoliou, Elena" sort="Kokoliou, Elena" uniqKey="Kokoliou E" first="Elena" last="Kokoliou">Elena Kokoliou</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Agronomie/explor/SisAgriV1/Data/Pmc/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000068 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Pmc/Checkpoint/biblio.hfd -nk 000068 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Agronomie
|area= SisAgriV1
|flux= Pmc
|étape= Checkpoint
|type= RBID
|clé= PMC:4544375
|texte= AGRIS: providing access to agricultural research data exploiting open data on the web
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Checkpoint/RBID.i -Sk "pubmed:26339471" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Checkpoint/biblio.hfd \
| NlmPubMed2Wicri -a SisAgriV1
| This area was generated with Dilib version V0.6.28. |  |