The diversity of microparasites of rodents: a comparative analysis that helps in identifying rodent-borne rich habitats in Southeast Asia
Identifieur interne : 000416 ( Ncbi/Merge ); précédent : 000415; suivant : 000417The diversity of microparasites of rodents: a comparative analysis that helps in identifying rodent-borne rich habitats in Southeast Asia
Auteurs : Frédéric Bordes [France] ; Vincent Herbreteau [France] ; Stéphane Dupuy [France] ; Yannick Chaval [France] ; Annelise Tran [France] ; Serge Morand [France, Thaïlande]Source :
- Infection Ecology & Epidemiology [ 2000-8686 ] ; 2013.
Abstract
Predicting habitats prone to favor disease transmission is challenging due to confounding information on habitats, reservoirs, and diseases. Comparative analysis, which aims at investigating ecological and evolutionary patterns among species, is a tool that may help. The emergence of zoonotic pathogens is a major health concern and is closely linked to habitat modifications by human activities. Risk assessment requires a better knowledge of the interactions between hosts, parasites, and the landscape.
We used information from a field spatial study that investigated the distribution of murid rodents, in various habitats of three countries in Southeast Asia, in combination with their status of infection by 10 taxa of microparasites obtained from the literature. Microparasite species richness was calculated by rodent species on 20,272 rodents of 13 species. Regression tree models and generalized linear models were used to explain microparasite diversity by the average distance between the trapping site and five categories of land cover: forest, steep agriculture land, flat agriculture land, water, and built-up surfaces. Another variable taken into account was the slope.
We found that microparasite diversity was positively associated with flat agriculture land, in this context mainly rice fields, and negatively associated with slope. Microparasite diversity decreased sharply a 100 m or less from flat agriculture land.
We conclude that there is high microparasite circulation in rodents of flooded farmlands, meaning possibly a higher risk of disease for human inhabitants.
Url:
DOI: 10.3402/iee.v3i0.20178
PubMed: 23577229
PubMed Central: 3621902
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<front><div type="abstract" xml:lang="en"><sec id="st1"><title>Background</title>
<p>Predicting habitats prone to favor disease transmission is challenging due to confounding information on habitats, reservoirs, and diseases. Comparative analysis, which aims at investigating ecological and evolutionary patterns among species, is a tool that may help. The emergence of zoonotic pathogens is a major health concern and is closely linked to habitat modifications by human activities. Risk assessment requires a better knowledge of the interactions between hosts, parasites, and the landscape.</p>
</sec>
<sec id="st2"><title>Methods</title>
<p>We used information from a field spatial study that investigated the distribution of murid rodents, in various habitats of three countries in Southeast Asia, in combination with their status of infection by 10 taxa of microparasites obtained from the literature. Microparasite species richness was calculated by rodent species on 20,272 rodents of 13 species. Regression tree models and generalized linear models were used to explain microparasite diversity by the average distance between the trapping site and five categories of land cover: forest, steep agriculture land, flat agriculture land, water, and built-up surfaces. Another variable taken into account was the slope.</p>
</sec>
<sec id="st3"><title>Results</title>
<p>We found that microparasite diversity was positively associated with flat agriculture land, in this context mainly rice fields, and negatively associated with slope. Microparasite diversity decreased sharply a 100 m or less from flat agriculture land.</p>
</sec>
<sec id="st4"><title>Conclusion</title>
<p>We conclude that there is high microparasite circulation in rodents of flooded farmlands, meaning possibly a higher risk of disease for human inhabitants.</p>
</sec>
</div>
</front>
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<pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Infect Ecol Epidemiol</journal-id>
<journal-id journal-id-type="iso-abbrev">Infect Ecol Epidemiol</journal-id>
<journal-id journal-id-type="publisher-id">IEE</journal-id>
<journal-title-group><journal-title>Infection Ecology & Epidemiology</journal-title>
</journal-title-group>
<issn pub-type="epub">2000-8686</issn>
<publisher><publisher-name>Co-Action Publishing</publisher-name>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">23577229</article-id>
<article-id pub-id-type="pmc">3621902</article-id>
<article-id pub-id-type="publisher-id">20178</article-id>
<article-id pub-id-type="doi">10.3402/iee.v3i0.20178</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Original Article</subject>
</subj-group>
</article-categories>
<title-group><article-title>The diversity of microparasites of rodents: a comparative analysis that helps in identifying rodent-borne rich habitats in Southeast Asia</article-title>
</title-group>
<contrib-group><contrib contrib-type="author"><name><surname>Bordes</surname>
<given-names>Frédéric</given-names>
</name>
<degrees>DVM, PhD</degrees>
<xref ref-type="aff" rid="AF0001">1</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Herbreteau</surname>
<given-names>Vincent</given-names>
</name>
<degrees>PhD</degrees>
<xref ref-type="aff" rid="AF0002">2</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Dupuy</surname>
<given-names>Stéphane</given-names>
</name>
<degrees>MSc</degrees>
<xref ref-type="aff" rid="AF0003">3</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Chaval</surname>
<given-names>Yannick</given-names>
</name>
<degrees>BSc</degrees>
<xref ref-type="aff" rid="AF0004">4</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Tran</surname>
<given-names>Annelise</given-names>
</name>
<degrees>PhD</degrees>
<xref ref-type="aff" rid="AF0003">3</xref>
<xref ref-type="aff" rid="AF0005">5</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Morand</surname>
<given-names>Serge</given-names>
</name>
<degrees>PhD</degrees>
<xref ref-type="aff" rid="AF0001">1</xref>
<xref ref-type="aff" rid="AF0003">3</xref>
<xref ref-type="aff" rid="AF0006">6</xref>
<xref ref-type="corresp" rid="cor1">*</xref>
</contrib>
</contrib-group>
<aff id="AF0001"><label>1</label>
Institut des Sciences de l'Evolution, CNRS-IRD-UM2, Université de Montpellier 2, Montpellier, France</aff>
<aff id="AF0002"><label>2</label>
ESPACE-DEV-IRD, Université de Montpellier 2, Montpellier, France</aff>
<aff id="AF0003"><label>3</label>
CIRAD, UMR TETIS, Montpellier, France</aff>
<aff id="AF0004"><label>4</label>
Centre de Biologie et de Gestion des Population, INRA, Montferrier sur Lez, France</aff>
<aff id="AF0005"><label>5</label>
CIRAD, UR AGIRs, Montpellier, France</aff>
<aff id="AF0006"><label>6</label>
Department of Parasitology, Faculty of Veterinary Sciences, Kasetsart University, Bangkok, Thailand</aff>
<author-notes><corresp id="cor1"><label>*</label>
<bold>Serge Morand</bold>
, Institut des Sciences de l'Evolution, UMR CNRS-IRD-UM2, CC65, Université de Montpellier 2, F-34095 Montpellier, France. Tel: +33 (0) 6 88 50 57 13. Email: <email xlink:href="serge.morand@univ-montp2.fr">serge.morand@univ-montp2.fr</email>
</corresp>
</author-notes>
<pub-date pub-type="epub"><day>08</day>
<month>4</month>
<year>2013</year>
</pub-date>
<pub-date pub-type="collection"><year>2013</year>
</pub-date>
<volume>3</volume>
<elocation-id content-type="doi">10.3402/iee.v3i0.20178</elocation-id>
<history><date date-type="received"><day>27</day>
<month>11</month>
<year>2012</year>
</date>
<date date-type="rev-recd"><day>20</day>
<month>2</month>
<year>2013</year>
</date>
<date date-type="accepted"><day>07</day>
<month>3</month>
<year>2013</year>
</date>
</history>
<permissions><copyright-statement>© 2013 Frédéric Bordes et al.</copyright-statement>
<copyright-year>2013</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/2.0/"><license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
</license>
</permissions>
<abstract><sec id="st1"><title>Background</title>
<p>Predicting habitats prone to favor disease transmission is challenging due to confounding information on habitats, reservoirs, and diseases. Comparative analysis, which aims at investigating ecological and evolutionary patterns among species, is a tool that may help. The emergence of zoonotic pathogens is a major health concern and is closely linked to habitat modifications by human activities. Risk assessment requires a better knowledge of the interactions between hosts, parasites, and the landscape.</p>
</sec>
<sec id="st2"><title>Methods</title>
<p>We used information from a field spatial study that investigated the distribution of murid rodents, in various habitats of three countries in Southeast Asia, in combination with their status of infection by 10 taxa of microparasites obtained from the literature. Microparasite species richness was calculated by rodent species on 20,272 rodents of 13 species. Regression tree models and generalized linear models were used to explain microparasite diversity by the average distance between the trapping site and five categories of land cover: forest, steep agriculture land, flat agriculture land, water, and built-up surfaces. Another variable taken into account was the slope.</p>
</sec>
<sec id="st3"><title>Results</title>
<p>We found that microparasite diversity was positively associated with flat agriculture land, in this context mainly rice fields, and negatively associated with slope. Microparasite diversity decreased sharply a 100 m or less from flat agriculture land.</p>
</sec>
<sec id="st4"><title>Conclusion</title>
<p>We conclude that there is high microparasite circulation in rodents of flooded farmlands, meaning possibly a higher risk of disease for human inhabitants.</p>
</sec>
</abstract>
<kwd-group><kwd>rodent-borne diseases</kwd>
<kwd>landscape</kwd>
<kwd>transmission ecology</kwd>
<kwd>comparative analysis</kwd>
</kwd-group>
</article-meta>
</front>
</pmc>
<affiliations><list><country><li>France</li>
<li>Thaïlande</li>
</country>
<region><li>Languedoc-Roussillon</li>
<li>Occitanie (région administrative)</li>
</region>
<settlement><li>Montpellier</li>
</settlement>
</list>
<tree><country name="France"><region name="Occitanie (région administrative)"><name sortKey="Bordes, Frederic" sort="Bordes, Frederic" uniqKey="Bordes F" first="Frédéric" last="Bordes">Frédéric Bordes</name>
</region>
<name sortKey="Chaval, Yannick" sort="Chaval, Yannick" uniqKey="Chaval Y" first="Yannick" last="Chaval">Yannick Chaval</name>
<name sortKey="Dupuy, Stephane" sort="Dupuy, Stephane" uniqKey="Dupuy S" first="Stéphane" last="Dupuy">Stéphane Dupuy</name>
<name sortKey="Herbreteau, Vincent" sort="Herbreteau, Vincent" uniqKey="Herbreteau V" first="Vincent" last="Herbreteau">Vincent Herbreteau</name>
<name sortKey="Morand, Serge" sort="Morand, Serge" uniqKey="Morand S" first="Serge" last="Morand">Serge Morand</name>
<name sortKey="Morand, Serge" sort="Morand, Serge" uniqKey="Morand S" first="Serge" last="Morand">Serge Morand</name>
<name sortKey="Tran, Annelise" sort="Tran, Annelise" uniqKey="Tran A" first="Annelise" last="Tran">Annelise Tran</name>
<name sortKey="Tran, Annelise" sort="Tran, Annelise" uniqKey="Tran A" first="Annelise" last="Tran">Annelise Tran</name>
</country>
<country name="Thaïlande"><noRegion><name sortKey="Morand, Serge" sort="Morand, Serge" uniqKey="Morand S" first="Serge" last="Morand">Serge Morand</name>
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</country>
</tree>
</affiliations>
</record>
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