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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Owner controlled data exchange in nutrigenomic collaborations: the NuGO information network</title><author><name sortKey="Harttig, Ulrich" sort="Harttig, Ulrich" uniqKey="Harttig U" first="Ulrich" last="Harttig">Ulrich Harttig</name><affiliation><nlm:aff id="Aff1">Department of Epidemiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany</nlm:aff></affiliation></author><author><name sortKey="Travis, Anthony J" sort="Travis, Anthony J" uniqKey="Travis A" first="Anthony J." last="Travis">Anthony J. Travis</name><affiliation><nlm:aff id="Aff2">University of Aberdeen Rowett Institute of Nutrition and Health, Greenburn Road, Bucksburn, Aberdeen, AB21 9SB UK</nlm:aff></affiliation></author><author><name sortKey="Rocca Serra, Philippe" sort="Rocca Serra, Philippe" uniqKey="Rocca Serra P" first="Philippe" last="Rocca-Serra">Philippe Rocca-Serra</name><affiliation><nlm:aff id="Aff3">EMBL-EBI, Wellcome Trust Genome Campus, Cambridge Hinxton, CB10 1SD UK</nlm:aff></affiliation></author><author><name sortKey="Renkema, Marten" sort="Renkema, Marten" uniqKey="Renkema M" first="Marten" last="Renkema">Marten Renkema</name><affiliation><nlm:aff id="Aff4">Topshare International BV, PO Box 240, 6700 AE Wageningen, The Netherlands</nlm:aff></affiliation></author><author><name sortKey="Van Ommen, Ben" sort="Van Ommen, Ben" uniqKey="Van Ommen B" first="Ben" last="Van Ommen">Ben Van Ommen</name><affiliation><nlm:aff id="Aff5">TNO Quality of Life, PO box 360, 3700 AJ Zeist, The Netherlands</nlm:aff></affiliation></author><author><name sortKey="Boeing, Heiner" sort="Boeing, Heiner" uniqKey="Boeing H" first="Heiner" last="Boeing">Heiner Boeing</name><affiliation><nlm:aff id="Aff1">Department of Epidemiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">19408032</idno><idno type="pmc">2690731</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2690731</idno><idno type="RBID">PMC:2690731</idno><idno type="doi">10.1007/s12263-009-0123-8</idno><date when="2009">2009</date><idno type="wicri:Area/Pmc/Corpus">000224</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Owner controlled data exchange in nutrigenomic collaborations: the NuGO information network</title><author><name sortKey="Harttig, Ulrich" sort="Harttig, Ulrich" uniqKey="Harttig U" first="Ulrich" last="Harttig">Ulrich Harttig</name><affiliation><nlm:aff id="Aff1">Department of Epidemiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany</nlm:aff></affiliation></author><author><name sortKey="Travis, Anthony J" sort="Travis, Anthony J" uniqKey="Travis A" first="Anthony J." last="Travis">Anthony J. Travis</name><affiliation><nlm:aff id="Aff2">University of Aberdeen Rowett Institute of Nutrition and Health, Greenburn Road, Bucksburn, Aberdeen, AB21 9SB UK</nlm:aff></affiliation></author><author><name sortKey="Rocca Serra, Philippe" sort="Rocca Serra, Philippe" uniqKey="Rocca Serra P" first="Philippe" last="Rocca-Serra">Philippe Rocca-Serra</name><affiliation><nlm:aff id="Aff3">EMBL-EBI, Wellcome Trust Genome Campus, Cambridge Hinxton, CB10 1SD UK</nlm:aff></affiliation></author><author><name sortKey="Renkema, Marten" sort="Renkema, Marten" uniqKey="Renkema M" first="Marten" last="Renkema">Marten Renkema</name><affiliation><nlm:aff id="Aff4">Topshare International BV, PO Box 240, 6700 AE Wageningen, The Netherlands</nlm:aff></affiliation></author><author><name sortKey="Van Ommen, Ben" sort="Van Ommen, Ben" uniqKey="Van Ommen B" first="Ben" last="Van Ommen">Ben Van Ommen</name><affiliation><nlm:aff id="Aff5">TNO Quality of Life, PO box 360, 3700 AJ Zeist, The Netherlands</nlm:aff></affiliation></author><author><name sortKey="Boeing, Heiner" sort="Boeing, Heiner" uniqKey="Boeing H" first="Heiner" last="Boeing">Heiner Boeing</name><affiliation><nlm:aff id="Aff1">Department of Epidemiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany</nlm:aff></affiliation></author></analytic><series><title level="j">Genes & Nutrition</title><idno type="ISSN">1555-8932</idno><idno type="eISSN">1865-3499</idno><imprint><date when="2009">2009</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>New ‘omics’ technologies are changing nutritional sciences research. They enable to tackle increasingly complex questions but also increase the need for collaboration between research groups. An important challenge for successful collaboration is the management and structured exchange of information that accompanies data-intense technologies. NuGO, the European Nutrigenomics Organization, the major collaborating network in molecular nutritional sciences, is supporting the application of modern information technologies in this area. We have developed and implemented a concept for data management and computing infrastructure that supports collaboration between nutrigenomics researchers. The system fills the gap between “private” storing with occasional file sharing by email and the use of centralized databases. It provides flexible tools to share data, also during experiments, while preserving ownership. The NuGO Information Network is a decentral, distributed system for data exchange based on standard web technology. Secure access to data, maintained by the individual researcher, is enabled by web services based on the the BioMoby framework. A central directory provides information about available web services. The flexibility of the infrastructure allows a wide variety of services for data processing and integration by combining several web services, including public services. Therefore, this integrated information system is suited for other research collaborations.</p></div></front></TEI><pmc xml:lang="EN" article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Genes Nutr</journal-id><journal-title>Genes & Nutrition</journal-title><issn pub-type="ppub">1555-8932</issn><issn pub-type="epub">1865-3499</issn><publisher><publisher-name>Springer-Verlag</publisher-name><publisher-loc>Berlin/Heidelberg</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">19408032</article-id><article-id pub-id-type="pmc">2690731</article-id><article-id pub-id-type="publisher-id">123</article-id><article-id pub-id-type="doi">10.1007/s12263-009-0123-8</article-id><article-categories><subj-group subj-group-type="heading"><subject>Original Paper</subject></subj-group></article-categories><title-group><article-title>Owner controlled data exchange in nutrigenomic collaborations: the NuGO information network</article-title></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name name-style="western"><surname>Harttig</surname><given-names>Ulrich</given-names></name><address><phone>+49-33200-88729</phone><fax>+49-33200-88721</fax><email>harttig@dife.de</email></address><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author"><name name-style="western"><surname>Travis</surname><given-names>Anthony J.</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name name-style="western"><surname>Rocca-Serra</surname><given-names>Philippe</given-names></name><xref ref-type="aff" rid="Aff3">3</xref></contrib><contrib contrib-type="author"><name name-style="western"><surname>Renkema</surname><given-names>Marten</given-names></name><xref ref-type="aff" rid="Aff4">4</xref></contrib><contrib contrib-type="author"><name name-style="western"><surname>van Ommen</surname><given-names>Ben</given-names></name><xref ref-type="aff" rid="Aff5">5</xref></contrib><contrib contrib-type="author"><name name-style="western"><surname>Boeing</surname><given-names>Heiner</given-names></name><xref ref-type="aff" rid="Aff1">1</xref></contrib><aff id="Aff1"><label>1</label>Department of Epidemiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany</aff><aff id="Aff2"><label>2</label>University of Aberdeen Rowett Institute of Nutrition and Health, Greenburn Road, Bucksburn, Aberdeen, AB21 9SB UK</aff><aff id="Aff3"><label>3</label>EMBL-EBI, Wellcome Trust Genome Campus, Cambridge Hinxton, CB10 1SD UK</aff><aff id="Aff4"><label>4</label>Topshare International BV, PO Box 240, 6700 AE Wageningen, The Netherlands</aff><aff id="Aff5"><label>5</label>TNO Quality of Life, PO box 360, 3700 AJ Zeist, The Netherlands</aff></contrib-group><pub-date pub-type="epub"><day>30</day><month>4</month><year>2009</year></pub-date><pub-date pub-type="ppub"><month>6</month><year>2009</year></pub-date><volume>4</volume><issue>2</issue><fpage>113</fpage><lpage>122</lpage><history><date date-type="received"><day>9</day><month>12</month><year>2008</year></date><date date-type="accepted"><day>16</day><month>4</month><year>2009</year></date></history><permissions><copyright-statement>© Springer-Verlag 2009</copyright-statement></permissions><abstract xml:lang="EN"><p>New ‘omics’ technologies are changing nutritional sciences research. They enable to tackle increasingly complex questions but also increase the need for collaboration between research groups. An important challenge for successful collaboration is the management and structured exchange of information that accompanies data-intense technologies. NuGO, the European Nutrigenomics Organization, the major collaborating network in molecular nutritional sciences, is supporting the application of modern information technologies in this area. We have developed and implemented a concept for data management and computing infrastructure that supports collaboration between nutrigenomics researchers. The system fills the gap between “private” storing with occasional file sharing by email and the use of centralized databases. It provides flexible tools to share data, also during experiments, while preserving ownership. The NuGO Information Network is a decentral, distributed system for data exchange based on standard web technology. Secure access to data, maintained by the individual researcher, is enabled by web services based on the the BioMoby framework. A central directory provides information about available web services. The flexibility of the infrastructure allows a wide variety of services for data processing and integration by combining several web services, including public services. Therefore, this integrated information system is suited for other research collaborations.</p></abstract><kwd-group><title>Keywords</title><kwd>Nutrigenomics</kwd><kwd>Data management</kwd><kwd>Data integration</kwd><kwd>Distributed information system</kwd><kwd>Web services</kwd></kwd-group><custom-meta-wrap><custom-meta><meta-name>issue-copyright-statement</meta-name><meta-value>© Springer-Verlag 2009</meta-value></custom-meta></custom-meta-wrap></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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