Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes1[OPEN]
Identifieur interne : 000246 ( Main/Exploration ); précédent : 000245; suivant : 000247Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes1[OPEN]
Auteurs : Meiyee Law ; Kevin L. Childs ; Michael S. Campbell ; Joshua C. Stein ; Andrew J. Olson ; Carson Holt ; Nicholas Panchy ; Jikai Lei ; Dian Jiao ; Carson M. Andorf ; Carolyn J. Lawrence ; Doreen Ware ; Shin-Han Shiu ; Yanni Sun ; Ning Jiang ; Mark YandellSource :
- Plant Physiology [ 0032-0889 ] ; 2014.
English descriptors
- KwdEn :
- Databases, Genetic (standards), Exons (genetics), Genes, Plant (genetics), Genome, Plant (genetics), Introns (genetics), Models, Genetic, Molecular Sequence Annotation (methods), Molecular Sequence Annotation (standards), Pseudogenes (genetics), Quality Control, RNA, Untranslated (genetics), Zea mays (genetics).
- MESH :
- chemical , genetics : RNA, Untranslated.
- genetics : Exons, Genes, Plant, Genome, Plant, Introns, Pseudogenes, Zea mays.
- methods : Molecular Sequence Annotation.
- standards : Databases, Genetic, Molecular Sequence Annotation.
- Models, Genetic, Quality Control.
Abstract
Url:
DOI: 10.1104/pp.114.245027
PubMed: 25384563
PubMed Central: 4280997
Affiliations:
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Le document en format XML
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<xref ref-type="fn" rid="fn3"><sup>[OPEN]</sup>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes<xref ref-type="fn" rid="fn1"><sup>1</sup>
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<author><name sortKey="Childs, Kevin L" sort="Childs, Kevin L" uniqKey="Childs K" first="Kevin L." last="Childs">Kevin L. Childs</name>
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<author><name sortKey="Stein, Joshua C" sort="Stein, Joshua C" uniqKey="Stein J" first="Joshua C." last="Stein">Joshua C. Stein</name>
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<author><name sortKey="Olson, Andrew J" sort="Olson, Andrew J" uniqKey="Olson A" first="Andrew J." last="Olson">Andrew J. Olson</name>
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<author><name sortKey="Ware, Doreen" sort="Ware, Doreen" uniqKey="Ware D" first="Doreen" last="Ware">Doreen Ware</name>
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<author><name sortKey="Shiu, Shin Han" sort="Shiu, Shin Han" uniqKey="Shiu S" first="Shin-Han" last="Shiu">Shin-Han Shiu</name>
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<series><title level="j">Plant Physiology</title>
<idno type="ISSN">0032-0889</idno>
<idno type="eISSN">1532-2548</idno>
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<term>Genome, Plant (genetics)</term>
<term>Introns (genetics)</term>
<term>Models, Genetic</term>
<term>Molecular Sequence Annotation (methods)</term>
<term>Molecular Sequence Annotation (standards)</term>
<term>Pseudogenes (genetics)</term>
<term>Quality Control</term>
<term>RNA, Untranslated (genetics)</term>
<term>Zea mays (genetics)</term>
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<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Untranslated</term>
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<term>Genome, Plant</term>
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<term>Pseudogenes</term>
<term>Zea mays</term>
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<front><div type="abstract" xml:lang="en"><p><italic>Reannotation of the maize genome using MAKER-P results in many revised and new gene models</italic>
.</p>
</div>
</front>
</TEI>
<affiliations><list></list>
<tree><noCountry><name sortKey="Andorf, Carson M" sort="Andorf, Carson M" uniqKey="Andorf C" first="Carson M." last="Andorf">Carson M. Andorf</name>
<name sortKey="Campbell, Michael S" sort="Campbell, Michael S" uniqKey="Campbell M" first="Michael S." last="Campbell">Michael S. Campbell</name>
<name sortKey="Childs, Kevin L" sort="Childs, Kevin L" uniqKey="Childs K" first="Kevin L." last="Childs">Kevin L. Childs</name>
<name sortKey="Holt, Carson" sort="Holt, Carson" uniqKey="Holt C" first="Carson" last="Holt">Carson Holt</name>
<name sortKey="Jiang, Ning" sort="Jiang, Ning" uniqKey="Jiang N" first="Ning" last="Jiang">Ning Jiang</name>
<name sortKey="Jiao, Dian" sort="Jiao, Dian" uniqKey="Jiao D" first="Dian" last="Jiao">Dian Jiao</name>
<name sortKey="Law, Meiyee" sort="Law, Meiyee" uniqKey="Law M" first="Meiyee" last="Law">Meiyee Law</name>
<name sortKey="Lawrence, Carolyn J" sort="Lawrence, Carolyn J" uniqKey="Lawrence C" first="Carolyn J." last="Lawrence">Carolyn J. Lawrence</name>
<name sortKey="Lei, Jikai" sort="Lei, Jikai" uniqKey="Lei J" first="Jikai" last="Lei">Jikai Lei</name>
<name sortKey="Olson, Andrew J" sort="Olson, Andrew J" uniqKey="Olson A" first="Andrew J." last="Olson">Andrew J. Olson</name>
<name sortKey="Panchy, Nicholas" sort="Panchy, Nicholas" uniqKey="Panchy N" first="Nicholas" last="Panchy">Nicholas Panchy</name>
<name sortKey="Shiu, Shin Han" sort="Shiu, Shin Han" uniqKey="Shiu S" first="Shin-Han" last="Shiu">Shin-Han Shiu</name>
<name sortKey="Stein, Joshua C" sort="Stein, Joshua C" uniqKey="Stein J" first="Joshua C." last="Stein">Joshua C. Stein</name>
<name sortKey="Sun, Yanni" sort="Sun, Yanni" uniqKey="Sun Y" first="Yanni" last="Sun">Yanni Sun</name>
<name sortKey="Ware, Doreen" sort="Ware, Doreen" uniqKey="Ware D" first="Doreen" last="Ware">Doreen Ware</name>
<name sortKey="Yandell, Mark" sort="Yandell, Mark" uniqKey="Yandell M" first="Mark" last="Yandell">Mark Yandell</name>
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