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Mitochondrial DNA reveals multiple Northern Hemisphere introductions of Caprella mutica (Crustacea, Amphipoda)

Identifieur interne : 001577 ( Istex/Corpus ); précédent : 001576; suivant : 001578

Mitochondrial DNA reveals multiple Northern Hemisphere introductions of Caprella mutica (Crustacea, Amphipoda)

Auteurs : Gail V. Ashton ; Mark I. Stevens ; Mark C. Hart ; David H. Green ; Michael T. Burrows ; Elizabeth J. Cook ; Kate J. Willis

Source :

RBID : ISTEX:55F876A681778FC47B0CCEEAC7F623717666CC30

English descriptors

Abstract

Caprella mutica (Crustacea, Amphipoda) has been widely introduced to non‐native regions in the last 40 years. Its native habitat is sub‐boreal northeast Asia, but in the Northern Hemisphere, it is now found on both coasts of North America, and North Atlantic coastlines of Europe. Direct sequencing of mitochondrial DNA (cytochrome c oxidase subunit I gene) was used to compare genetic variation in native and non‐native populations of C. mutica. These data were used to investigate the invasion history of C. mutica and to test potential source populations in Japan. High diversity (31 haplotypes from 49 individuals), but no phylogeographical structure, was identified in four populations in the putative native range. In contrast, non‐native populations showed reduced genetic diversity (7 haplotypes from 249 individuals) and informative phylogeographical structure. Grouping of C. mutica populations into native, east Pacific, and Atlantic groups explained the most among‐region variation (59%). This indicates independent introduction pathways for C. mutica to the Pacific and Atlantic coasts of North America. Two dominant haplotypes were identified in eastern and western Atlantic coastal populations, indicating several dispersal routes within the Atlantic. The analysis indicated that several introductions from multiple sources were likely to be responsible for the observed global distribution of C. mutica, but the pathways were least well defined among the Atlantic populations. The four sampled populations of C. mutica in Japan could not be identified as the direct source of the non‐native populations examined in this study. The high diversity within the Japan populations indicates that the native range needs to be assessed at a far greater scale, both within and among populations, to accurately assess the source of the global spread of C. mutica.

Url:
DOI: 10.1111/j.1365-294X.2007.03668.x

Links to Exploration step

ISTEX:55F876A681778FC47B0CCEEAC7F623717666CC30

Le document en format XML

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<title type="tocHeading2">Phylogeography, Speciation and Hybridization</title>
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<correspondenceTo> Gail Ashton, Smithsonian Environmental Research Centre, 647 Contees Wharf Road, Edgewater, MD 21037–0028, USA. Fax: +1443 4822380; E‐mail:
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<title type="main">Mitochondrial DNA reveals multiple Northern Hemisphere introductions of
<i>Caprella mutica</i>
(Crustacea, Amphipoda)</title>
<title type="shortAuthors">G. V. ASHTON
<i>ET AL.</i>
</title>
<title type="short">MULTIPLE INTRODUCTIONS OF
<i>CAPRELLA MUTICA</i>
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<p>
<b>Table S1</b>
The 60 variable nucleotide sites among the 38
<i>Caprella mutica</i>
haplotypes.
<i>Caprella mutica</i>
haplotype 1 is used as a reference sequence</p>
<p>
<b>Table S2</b>
Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified
<i>Caprella mutica</i>
haplotypes and two outgroup taxa (Cap1‐
<i>Caprella acanthogaster</i>
; Cap2‐
<i>Caprella equilibra</i>
)</p>
<p>
<b>Table S3</b>
Sample number (
<i>n</i>
), haplotype diversity (
<i>h</i>
), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1</p>
<p>
<b>Table S4</b>
Pairwise comparisons of
<i>F</i>
<sub>ST</sub>
values for COI sequences of
<i>Caprella mutica</i>
from 15 sites in the native and non‐native range</p>
<p>This material is available as part of the online article from:</p>
<p>
<link href="http://www.blackwell-synergy.com/doi/abs/10.1111/j.1742-4658.2008.03668.x"> http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x</link>
</p>
<p>(This link will take you to the article abstract).</p>
<p>Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article.</p>
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<p>
<i>Caprella mutica</i>
(Crustacea, Amphipoda) has been widely introduced to non‐native regions in the last 40 years. Its native habitat is sub‐boreal northeast Asia, but in the Northern Hemisphere, it is now found on both coasts of North America, and North Atlantic coastlines of Europe. Direct sequencing of mitochondrial DNA (cytochrome
<i>c</i>
oxidase subunit I gene) was used to compare genetic variation in native and non‐native populations of
<i>C. mutica</i>
. These data were used to investigate the invasion history of
<i>C. mutica</i>
and to test potential source populations in Japan. High diversity (31 haplotypes from 49 individuals), but no phylogeographical structure, was identified in four populations in the putative native range. In contrast, non‐native populations showed reduced genetic diversity (7 haplotypes from 249 individuals) and informative phylogeographical structure. Grouping of
<i>C. mutica</i>
populations into native, east Pacific, and Atlantic groups explained the most among‐region variation (59%). This indicates independent introduction pathways for
<i>C. mutica</i>
to the Pacific and Atlantic coasts of North America. Two dominant haplotypes were identified in eastern and western Atlantic coastal populations, indicating several dispersal routes within the Atlantic. The analysis indicated that several introductions from multiple sources were likely to be responsible for the observed global distribution of
<i>C. mutica</i>
, but the pathways were least well defined among the Atlantic populations. The four sampled populations of
<i>C. mutica</i>
in Japan could not be identified as the direct source of the non‐native populations examined in this study. The high diversity within the Japan populations indicates that the native range needs to be assessed at a far greater scale, both within and among populations, to accurately assess the source of the global spread of
<i>C. mutica</i>
.</p>
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<abstract lang="en">Caprella mutica (Crustacea, Amphipoda) has been widely introduced to non‐native regions in the last 40 years. Its native habitat is sub‐boreal northeast Asia, but in the Northern Hemisphere, it is now found on both coasts of North America, and North Atlantic coastlines of Europe. Direct sequencing of mitochondrial DNA (cytochrome c oxidase subunit I gene) was used to compare genetic variation in native and non‐native populations of C. mutica. These data were used to investigate the invasion history of C. mutica and to test potential source populations in Japan. High diversity (31 haplotypes from 49 individuals), but no phylogeographical structure, was identified in four populations in the putative native range. In contrast, non‐native populations showed reduced genetic diversity (7 haplotypes from 249 individuals) and informative phylogeographical structure. Grouping of C. mutica populations into native, east Pacific, and Atlantic groups explained the most among‐region variation (59%). This indicates independent introduction pathways for C. mutica to the Pacific and Atlantic coasts of North America. Two dominant haplotypes were identified in eastern and western Atlantic coastal populations, indicating several dispersal routes within the Atlantic. The analysis indicated that several introductions from multiple sources were likely to be responsible for the observed global distribution of C. mutica, but the pathways were least well defined among the Atlantic populations. The four sampled populations of C. mutica in Japan could not be identified as the direct source of the non‐native populations examined in this study. The high diversity within the Japan populations indicates that the native range needs to be assessed at a far greater scale, both within and among populations, to accurately assess the source of the global spread of C. mutica.</abstract>
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<note type="content"> Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article. Table S1 The 60 variable nucleotide sites among the 38 Caprella mutica haplotypes. Caprella mutica haplotype 1 is used as a reference sequence Table S2 Genetic distance based on sequence variation in the mtDNA COI sequences (563 aligned sites) among the 38 identified Caprella mutica haplotypes and two outgroup taxa (Cap1‐ Caprella acanthogaster; Cap2‐ Caprella equilibra) Table S3 Sample number (n), haplotype diversity (h), and nucleotide diversity (&pgr;) for COI sequences of Caprella mutica. Site codes correspond to Table 1 Table S4 Pairwise comparisons of FST values for COI sequences of Caprella mutica from 15 sites in the native and non‐native range This material is available as part of the online article from: http://www.blackwell‐synergy.com/doi/abs/10.1111/j.1742‐4658.2008.03668.x (This link will take you to the article abstract). Please note: Blackwell Publishing are not responsible for the content or functionality of any supplementary materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article.Supporting Info Item: Supporting info item - </note>
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