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Conformational investigation of α,β‐dehydropeptides VII. Conformation of Ac‐Pro‐ΔAla‐NHCH3 and Ac‐Pro‐(E)‐ΔAbu‐NHCH3: comparison with (Z)‐substituted α,β‐dehydropeptides†

Identifieur interne : 001561 ( Istex/Corpus ); précédent : 001560; suivant : 001562

Conformational investigation of α,β‐dehydropeptides VII. Conformation of Ac‐Pro‐ΔAla‐NHCH3 and Ac‐Pro‐(E)‐ΔAbu‐NHCH3: comparison with (Z)‐substituted α,β‐dehydropeptides†

Auteurs : C. Pietrzy Aski ; B. Rzeszotarska ; E. Ciszak ; M. Lisowski ; Z. Kubica ; G. Boussard

Source :

RBID : ISTEX:88F750669484C93CBC90291C09CAD5C7BD15AF2C

English descriptors

Abstract

The crystal structure and solution conformation of Ac‐Pro‐ΔAla‐NHCH3 and the solution conformation of Ac‐Pro‐(E)‐ΔAbu‐NHCH3 were investigated by X‐ray diffraction method and NMR, FTIR and CD spectroscopies. Ac‐Pro‐ΔAla‐NHCH, adopts an extended‐coil conformation in the crystalline state, with all‐trans peptide bonds and the ΔAla residue being in a C5 form, φ1=– 71.4(4), ψ1=– 16.8(4), φ2=– 178.4(3) and ψ2= 172.4(3)°. In inert solvents the peptide also assumes the C5 conformation, but a γ‐turn on the Pro residue cannot be ruled out. In these solvents Ac‐Pro‐(E)‐ ΔAbu‐NHCH3 accommodates a βII‐turn, but a minor conformer with a nearly planar disposition of the CO—NH and C=C bonds (φ2∼0°) is also present. Previous spectroscopic studies of the (Z)‐substituted dehydropeptides Ac‐Pro‐(Z)‐ ΔAbu‐NHCH, and Ac‐Pro‐ΔVal‐NHCH3 reveal that both peptides prefer a βII‐turn in solution. Comparison of conformations in the family of four Ac‐Pro‐ΔXaa‐NHCH3 peptides let us formulate the following order of their tendency to adopt a β‐turn in solution: (Z)‐ ΔAbu > (E)‐ δAbu > ΔVal; ΔAla does not. None of the folded structures formed by the four compounds is stable in strongly solvating media. © Munksgaard 1996.

Url:
DOI: 10.1111/j.1399-3011.1996.tb00851.x

Links to Exploration step

ISTEX:88F750669484C93CBC90291C09CAD5C7BD15AF2C

Le document en format XML

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<div type="abstract" xml:lang="en">The crystal structure and solution conformation of Ac‐Pro‐ΔAla‐NHCH3 and the solution conformation of Ac‐Pro‐(E)‐ΔAbu‐NHCH3 were investigated by X‐ray diffraction method and NMR, FTIR and CD spectroscopies. Ac‐Pro‐ΔAla‐NHCH, adopts an extended‐coil conformation in the crystalline state, with all‐trans peptide bonds and the ΔAla residue being in a C5 form, φ1=– 71.4(4), ψ1=– 16.8(4), φ2=– 178.4(3) and ψ2= 172.4(3)°. In inert solvents the peptide also assumes the C5 conformation, but a γ‐turn on the Pro residue cannot be ruled out. In these solvents Ac‐Pro‐(E)‐ ΔAbu‐NHCH3 accommodates a βII‐turn, but a minor conformer with a nearly planar disposition of the CO—NH and C=C bonds (φ2∼0°) is also present. Previous spectroscopic studies of the (Z)‐substituted dehydropeptides Ac‐Pro‐(Z)‐ ΔAbu‐NHCH, and Ac‐Pro‐ΔVal‐NHCH3 reveal that both peptides prefer a βII‐turn in solution. Comparison of conformations in the family of four Ac‐Pro‐ΔXaa‐NHCH3 peptides let us formulate the following order of their tendency to adopt a β‐turn in solution: (Z)‐ ΔAbu > (E)‐ δAbu > ΔVal; ΔAla does not. None of the folded structures formed by the four compounds is stable in strongly solvating media. © Munksgaard 1996.</div>
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<abstract>The crystal structure and solution conformation of Ac‐Pro‐ΔAla‐NHCH3 and the solution conformation of Ac‐Pro‐(E)‐ΔAbu‐NHCH3 were investigated by X‐ray diffraction method and NMR, FTIR and CD spectroscopies. Ac‐Pro‐ΔAla‐NHCH, adopts an extended‐coil conformation in the crystalline state, with all‐trans peptide bonds and the ΔAla residue being in a C5 form, φ1=– 71.4(4), ψ1=– 16.8(4), φ2=– 178.4(3) and ψ2= 172.4(3)°. In inert solvents the peptide also assumes the C5 conformation, but a γ‐turn on the Pro residue cannot be ruled out. In these solvents Ac‐Pro‐(E)‐ ΔAbu‐NHCH3 accommodates a βII‐turn, but a minor conformer with a nearly planar disposition of the CO—NH and C=C bonds (φ2∼0°) is also present. Previous spectroscopic studies of the (Z)‐substituted dehydropeptides Ac‐Pro‐(Z)‐ ΔAbu‐NHCH, and Ac‐Pro‐ΔVal‐NHCH3 reveal that both peptides prefer a βII‐turn in solution. Comparison of conformations in the family of four Ac‐Pro‐ΔXaa‐NHCH3 peptides let us formulate the following order of their tendency to adopt a β‐turn in solution: (Z)‐ ΔAbu > (E)‐ δAbu > ΔVal; ΔAla does not. None of the folded structures formed by the four compounds is stable in strongly solvating media. © Munksgaard 1996.</abstract>
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<hi rend="italic">E</hi>
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<hi rend="subscript">3</hi>
reveal that both peptides prefer a βII‐turn in solution. Comparison of conformations in the family of four Ac‐Pro‐ΔXaa‐NHCH
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<p>The crystal structure and solution conformation of Ac‐Pro‐ΔAla‐NHCH
<sub>3</sub>
and the solution conformation of Ac‐Pro‐(
<i>E</i>
)‐ΔAbu‐NHCH
<sub>3</sub>
were investigated by X‐ray diffraction method and NMR, FTIR and CD spectroscopies. Ac‐Pro‐ΔAla‐NHCH, adopts an extended‐coil conformation in the crystalline state, with
<i>all‐trans</i>
peptide bonds and the ΔAla residue being in a C
<sub>5</sub>
form, φ
<sub>1</sub>
=– 71.4(4), ψ
<sub>1</sub>
=– 16.8(4), φ
<sub>2</sub>
=– 178.4(3) and ψ
<sub>2</sub>
= 172.4(3)°. In inert solvents the peptide also assumes the C
<sub>5</sub>
conformation, but a γ‐turn on the Pro residue cannot be ruled out. In these solvents Ac‐Pro‐(
<i>E</i>
)‐ ΔAbu‐NHCH
<sub>3</sub>
accommodates a βII‐turn, but a minor conformer with a nearly planar disposition of the CO—NH and C=C bonds (φ
<sub>2</sub>
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<i>Z</i>
)‐ ΔAbu‐NHCH, and Ac‐Pro‐ΔVal‐NHCH
<sub>3</sub>
reveal that both peptides prefer a βII‐turn in solution. Comparison of conformations in the family of four Ac‐Pro‐ΔXaa‐NHCH
<sub>3</sub>
peptides let us formulate the following order of their tendency to adopt a β‐turn in solution: (
<i>Z</i>
)‐ ΔAbu > (E)‐ δAbu > ΔVal; ΔAla does not. None of the folded structures formed by the four compounds is stable in strongly solvating media. © Munksgaard 1996.</p>
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<abstract lang="en">The crystal structure and solution conformation of Ac‐Pro‐ΔAla‐NHCH3 and the solution conformation of Ac‐Pro‐(E)‐ΔAbu‐NHCH3 were investigated by X‐ray diffraction method and NMR, FTIR and CD spectroscopies. Ac‐Pro‐ΔAla‐NHCH, adopts an extended‐coil conformation in the crystalline state, with all‐trans peptide bonds and the ΔAla residue being in a C5 form, φ1=– 71.4(4), ψ1=– 16.8(4), φ2=– 178.4(3) and ψ2= 172.4(3)°. In inert solvents the peptide also assumes the C5 conformation, but a γ‐turn on the Pro residue cannot be ruled out. In these solvents Ac‐Pro‐(E)‐ ΔAbu‐NHCH3 accommodates a βII‐turn, but a minor conformer with a nearly planar disposition of the CO—NH and C=C bonds (φ2∼0°) is also present. Previous spectroscopic studies of the (Z)‐substituted dehydropeptides Ac‐Pro‐(Z)‐ ΔAbu‐NHCH, and Ac‐Pro‐ΔVal‐NHCH3 reveal that both peptides prefer a βII‐turn in solution. Comparison of conformations in the family of four Ac‐Pro‐ΔXaa‐NHCH3 peptides let us formulate the following order of their tendency to adopt a β‐turn in solution: (Z)‐ ΔAbu > (E)‐ δAbu > ΔVal; ΔAla does not. None of the folded structures formed by the four compounds is stable in strongly solvating media. © Munksgaard 1996.</abstract>
<note type="content">*For Part VI of this series see ref. 1.</note>
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<topic>circular dichroism</topic>
<topic>C5 conformation</topic>
<topic>crystal structure</topic>
<topic>dehydroalanine</topic>
<topic>β‐dehydrobutyrine</topic>
<topic>β‐dehydropeptide conformation</topic>
<topic>infrared spectroscopy</topic>
<topic>nuclear magnetic resonance</topic>
<topic>β‐turn</topic>
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