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Prokaryotic and eukaryotic pyridoxal-dependent decarboxylases are homologous

Identifieur interne : 001109 ( Istex/Corpus ); précédent : 001108; suivant : 001110

Prokaryotic and eukaryotic pyridoxal-dependent decarboxylases are homologous

Auteurs : F. Rob Jackson

Source :

RBID : ISTEX:9EADD954CD6EE983DE0BC564B31DDD9B3B571E14

English descriptors

Abstract

Summary: A database search has revealed significant and extensive sequence similarities among prokaryotic and eukaryotic pyridoxal phosphate (PLP)-dependent decarboxylases, includingDrosophila glutamic acid decarboxylase (GAD) and bacterial histidine decarboxylase (HDC). Based on these findings, the sequences of seven PLP-dependent decarboxylases from five different organisms have been aligned to derive a consensus sequence for this family of enzymes. In addition, quantitative methods have been employed to calculate the relative evolutionary distances between pairs of the decarboxylases comprising this family. The multiple sequence analysis together with the quantitative results strongly suggest an ancient and common origin for all PLP-dependent decarboxylases. This analysis also indicates that prokaryotic and eukaryotic HDC activities evolved independently. Finally, a sensitive search algorithm (PROFILE) was unable to detect additional members of this decarboxylase family in protein sequence databases.

Url:
DOI: 10.1007/BF02101126

Links to Exploration step

ISTEX:9EADD954CD6EE983DE0BC564B31DDD9B3B571E14

Le document en format XML

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<abstract lang="en">Summary: A database search has revealed significant and extensive sequence similarities among prokaryotic and eukaryotic pyridoxal phosphate (PLP)-dependent decarboxylases, includingDrosophila glutamic acid decarboxylase (GAD) and bacterial histidine decarboxylase (HDC). Based on these findings, the sequences of seven PLP-dependent decarboxylases from five different organisms have been aligned to derive a consensus sequence for this family of enzymes. In addition, quantitative methods have been employed to calculate the relative evolutionary distances between pairs of the decarboxylases comprising this family. The multiple sequence analysis together with the quantitative results strongly suggest an ancient and common origin for all PLP-dependent decarboxylases. This analysis also indicates that prokaryotic and eukaryotic HDC activities evolved independently. Finally, a sensitive search algorithm (PROFILE) was unable to detect additional members of this decarboxylase family in protein sequence databases.</abstract>
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<title>J Mol Evol</title>
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<dateIssued encoding="w3cdtf">1990-10-01</dateIssued>
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<genre>Life Sciences</genre>
<topic>Plant Sciences</topic>
<topic>Cell Biology</topic>
<topic>Microbiology</topic>
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<identifier type="ISSN">0022-2844</identifier>
<identifier type="eISSN">1432-1432</identifier>
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<number>31</number>
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<start>325</start>
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<accessCondition type="use and reproduction" contentType="copyright">Springer-Verlag New York Inc., 1990</accessCondition>
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