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jmzML, an open-source Java API for mzML, the PSI standard for MS data

Identifieur interne : 000055 ( PascalFrancis/Corpus ); précédent : 000054; suivant : 000056

jmzML, an open-source Java API for mzML, the PSI standard for MS data

Auteurs : Richard G. Cote ; Florian Reisinger ; Lennart Martens

Source :

RBID : Pascal:10-0204763

Descripteurs français

English descriptors

Abstract

We here present jmzML, a Java API for the Proteomics Standards Initiative mzML data standard. Based on the Java Architecture for XML Binding and XPath-based XML indexer random-access XML parser, jmzML can handle arbitrarily large files in minimal memory, allowing easy and efficient processing of mzML files using the Java programming language. jmzML also automatically resolves internal XML references on-the-fly. The library (which includes a viewer) can be downloaded from http://jmzml.googlecode.com.

Notice en format standard (ISO 2709)

Pour connaître la documentation sur le format Inist Standard.

pA  
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A03   1    @0 Proteomics : (Weinh., Print)
A05       @2 10
A06       @2 7
A08 01  1  ENG  @1 jmzML, an open-source Java API for mzML, the PSI standard for MS data
A11 01  1    @1 COTE (Richard G.)
A11 02  1    @1 REISINGER (Florian)
A11 03  1    @1 MARTENS (Lennart)
A14 01      @1 EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus @2 Cambridge @3 GBR @Z 1 aut. @Z 2 aut.
A14 02      @1 Department of Medical Protein Research, VIB @2 Ghent @3 BEL @Z 3 aut.
A14 03      @1 Department of Biochemistry, Ghent University @2 Ghent @3 BEL @Z 3 aut.
A20       @1 1332-1335
A21       @1 2010
A23 01      @0 ENG
A43 01      @1 INIST @2 27206 @5 354000189696920010
A44       @0 0000 @1 © 2010 INIST-CNRS. All rights reserved.
A45       @0 7 ref.
A47 01  1    @0 10-0204763
A60       @1 P
A61       @0 A
A64 01  1    @0 Proteomics : (Weinheim. Print)
A66 01      @0 DEU
C01 01    ENG  @0 We here present jmzML, a Java API for the Proteomics Standards Initiative mzML data standard. Based on the Java Architecture for XML Binding and XPath-based XML indexer random-access XML parser, jmzML can handle arbitrarily large files in minimal memory, allowing easy and efficient processing of mzML files using the Java programming language. jmzML also automatically resolves internal XML references on-the-fly. The library (which includes a viewer) can be downloaded from http://jmzml.googlecode.com.
C02 01  X    @0 002A02D10
C03 01  X  FRE  @0 Norme @5 05
C03 01  X  ENG  @0 Standards @5 05
C03 01  X  SPA  @0 Norma @5 05
C03 02  X  FRE  @0 Etalon @5 06
C03 02  X  ENG  @0 Standard @5 06
C03 02  X  SPA  @0 Marco @5 06
C03 03  X  FRE  @0 Protéomique @5 07
C03 03  X  ENG  @0 Proteomics @5 07
C03 03  X  SPA  @0 Proteómica @5 07
N21       @1 137
N44 01      @1 OTO
N82       @1 OTO

Format Inist (serveur)

NO : PASCAL 10-0204763 INIST
ET : jmzML, an open-source Java API for mzML, the PSI standard for MS data
AU : COTE (Richard G.); REISINGER (Florian); MARTENS (Lennart)
AF : EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus/Cambridge/Royaume-Uni (1 aut., 2 aut.); Department of Medical Protein Research, VIB/Ghent/Belgique (3 aut.); Department of Biochemistry, Ghent University/Ghent/Belgique (3 aut.)
DT : Publication en série; Niveau analytique
SO : Proteomics : (Weinheim. Print); ISSN 1615-9853; Allemagne; Da. 2010; Vol. 10; No. 7; Pp. 1332-1335; Bibl. 7 ref.
LA : Anglais
EA : We here present jmzML, a Java API for the Proteomics Standards Initiative mzML data standard. Based on the Java Architecture for XML Binding and XPath-based XML indexer random-access XML parser, jmzML can handle arbitrarily large files in minimal memory, allowing easy and efficient processing of mzML files using the Java programming language. jmzML also automatically resolves internal XML references on-the-fly. The library (which includes a viewer) can be downloaded from http://jmzml.googlecode.com.
CC : 002A02D10
FD : Norme; Etalon; Protéomique
ED : Standards; Standard; Proteomics
SD : Norma; Marco; Proteómica
LO : INIST-27206.354000189696920010
ID : 10-0204763

Links to Exploration step

Pascal:10-0204763

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