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Fossorial but widespread: the phylogeography of the common spadefoot toad (Pelobates fuscus), and the role of the Po Valley as a major source of genetic variability

Identifieur interne : 001B00 ( Istex/Corpus ); précédent : 001A99; suivant : 001B01

Fossorial but widespread: the phylogeography of the common spadefoot toad (Pelobates fuscus), and the role of the Po Valley as a major source of genetic variability

Auteurs : Angelica Crottini ; Franco Andreone ; Joachim Kosuch ; Leo J. Borkin ; Spartak N. Litvinchuk ; Christophe Eggert ; Michael Veith

Source :

RBID : ISTEX:B0D966A51F945D700D37A46368F0C49630FC5E11

English descriptors

Abstract

Pelobates fuscus is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species’ range, we sequenced 702 bp of the mitochondrial cytochrome b gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCPA, mismatch distribution and Bayesian dating. Coalescent simulations were used as post hoc tests for plausibility of derived or a priori assumed biogeographical hypotheses. Our combination of all approaches enabled the reconstruction of the colonization history and phylogeography of P. fuscus and confirmed a previous assumption of the existence of two major genetic lineages within P. fuscus. Using the Afro‐European vicariance of Pelobates cultripes and Pelobates varaldii and applying Bayesian dating we estimated the divergence of these phylogeographical lineages to the Pliocene. We suggest the existence of three different glacial refugia: (i) the area between the Caspian and Black Seas as the origin for the expansion of the ‘eastern lineage’; (ii) the Danube system as a centre of diversity for part of the ‘western lineage’; (iii) the Po Valley, the largest centre of genetic variability. This fits the hypothesis that climatic fluctuation was a key event for differentiation processes in P. fuscus.

Url:
DOI: 10.1111/j.1365-294X.2007.03274.x

Links to Exploration step

ISTEX:B0D966A51F945D700D37A46368F0C49630FC5E11

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<p>Pelobates fuscus is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species’ range, we sequenced 702 bp of the mitochondrial cytochrome b gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCPA, mismatch distribution and Bayesian dating. Coalescent simulations were used as post hoc tests for plausibility of derived or a priori assumed biogeographical hypotheses. Our combination of all approaches enabled the reconstruction of the colonization history and phylogeography of P. fuscus and confirmed a previous assumption of the existence of two major genetic lineages within P. fuscus. Using the Afro‐European vicariance of Pelobates cultripes and Pelobates varaldii and applying Bayesian dating we estimated the divergence of these phylogeographical lineages to the Pliocene. We suggest the existence of three different glacial refugia: (i) the area between the Caspian and Black Seas as the origin for the expansion of the ‘eastern lineage’; (ii) the Danube system as a centre of diversity for part of the ‘western lineage’; (iii) the Po Valley, the largest centre of genetic variability. This fits the hypothesis that climatic fluctuation was a key event for differentiation processes in P. fuscus.</p>
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<correspondenceTo> Angelica Crottini, Fax: +39‐02‐50314781; E‐mail:
<email>tiliquait@yahoo.it</email>
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<unparsedEditorialHistory>Received 24 September 2006; revision accepted 11 December 2006</unparsedEditorialHistory>
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<title type="main">Fossorial but widespread: the phylogeography of the common spadefoot toad (
<i>Pelobates fuscus</i>
), and the role of the Po Valley as a major source of genetic variability</title>
<title type="shortAuthors">A. CROTTINI
<i>ET AL.</i>
</title>
<title type="short">PHYLOGEOGRAPHY OF THE COMMON SPADEFOOT TOAD</title>
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<personName>
<givenNames>LEO J.</givenNames>
<familyName>BORKIN</familyName>
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</creator>
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<personName>
<givenNames>SPARTAK N.</givenNames>
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<unparsedAffiliation>Museo Regionale di Scienze Naturali, Sezione di Zoologia, Via G. Giolitti, 36, 10123 Torino, Italy,</unparsedAffiliation>
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<unparsedAffiliation>Universität Trier, Fachbereich VI Biogeographie, 54286 Trier, Germany,</unparsedAffiliation>
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<unparsedAffiliation>Department of Herpetology, Zoological Institute, Russian Academy of Sciences, Universitetskaya nab. 1, 199034 St. Petersburg, Russia,</unparsedAffiliation>
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<unparsedAffiliation>Institute of Cytology, Russian Academy of Sciences, Tikhoretsky pr. 4, 194064 St. Petersburg, Russia,</unparsedAffiliation>
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<keyword xml:id="k1">mismatch distribution</keyword>
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<p>
<i>Pelobates fuscus</i>
is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species’ range, we sequenced 702 bp of the mitochondrial cytochrome
<i>b</i>
gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCPA, mismatch distribution and Bayesian dating. Coalescent simulations were used as
<i>post hoc</i>
tests for plausibility of derived or
<i>a priori</i>
assumed biogeographical hypotheses. Our combination of all approaches enabled the reconstruction of the colonization history and phylogeography of
<i>P. fuscus</i>
and confirmed a previous assumption of the existence of two major genetic lineages within
<i>P. fuscus</i>
. Using the Afro‐European vicariance of
<i>Pelobates cultripes</i>
and
<i>Pelobates varaldii</i>
and applying Bayesian dating we estimated the divergence of these phylogeographical lineages to the Pliocene. We suggest the existence of three different glacial refugia: (i) the area between the Caspian and Black Seas as the origin for the expansion of the ‘eastern lineage’; (ii) the Danube system as a centre of diversity for part of the ‘western lineage’; (iii) the Po Valley, the largest centre of genetic variability. This fits the hypothesis that climatic fluctuation was a key event for differentiation processes in
<i>P. fuscus</i>
.</p>
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<abstract lang="en">Pelobates fuscus is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species’ range, we sequenced 702 bp of the mitochondrial cytochrome b gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCPA, mismatch distribution and Bayesian dating. Coalescent simulations were used as post hoc tests for plausibility of derived or a priori assumed biogeographical hypotheses. Our combination of all approaches enabled the reconstruction of the colonization history and phylogeography of P. fuscus and confirmed a previous assumption of the existence of two major genetic lineages within P. fuscus. Using the Afro‐European vicariance of Pelobates cultripes and Pelobates varaldii and applying Bayesian dating we estimated the divergence of these phylogeographical lineages to the Pliocene. We suggest the existence of three different glacial refugia: (i) the area between the Caspian and Black Seas as the origin for the expansion of the ‘eastern lineage’; (ii) the Danube system as a centre of diversity for part of the ‘western lineage’; (iii) the Po Valley, the largest centre of genetic variability. This fits the hypothesis that climatic fluctuation was a key event for differentiation processes in P. fuscus.</abstract>
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<title>Molecular Ecology</title>
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<identifier type="ISSN">0962-1083</identifier>
<identifier type="eISSN">1365-294X</identifier>
<identifier type="DOI">10.1111/(ISSN)1365-294X</identifier>
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