PercaFluV4, PubMed, Corpus, bibRecord, 000396

DNA barcoding analysis of fish species diversity in four north Greek lakes.

Identifieur interne : 000396 ( PubMed/Corpus ); précédent : 000395; suivant : 000397

DNA barcoding analysis of fish species diversity in four north Greek lakes.

Auteurs : Alexandros Triantafyllidis ; Dimitra Bobori ; Christine Koliamitra ; Emma Gbandi ; Maria Mpanti ; Olga Petriki ; Nikoletta Karaiskou

Source :

Mitochondrial DNA ; 2011.

RBID : pubmed:21261496

English descriptors

KwdEn :
- Animals, Cyprinidae (classification), Cyprinidae (genetics), DNA Barcoding, Taxonomic (methods), DNA Barcoding, Taxonomic (standards), DNA, Mitochondrial (analysis), DNA, Mitochondrial (genetics), Electron Transport Complex IV (genetics), Fishes (classification), Fishes (genetics), Genetic Variation, Greece, Lakes, Perciformes (classification), Perciformes (genetics), Sequence Analysis, DNA, Species Specificity.
MESH :
- chemical , analysis : DNA, Mitochondrial.
- geographic : Greece.
- classification : Cyprinidae, Fishes, Perciformes.
- genetics : Cyprinidae, DNA, Mitochondrial, Electron Transport Complex IV, Fishes, Perciformes.
- methods : DNA Barcoding, Taxonomic.
- standards : DNA Barcoding, Taxonomic.
- Animals, Genetic Variation, Lakes, Sequence Analysis, DNA, Species Specificity.

Abstract

The present study is the first to apply DNA barcoding on identifying 37 freshwater fish species from the rich Balkan ichthyofauna.

DOI: 10.3109/19401736.2010.542242
PubMed: 21261496

Links to Exploration step

pubmed:21261496

Le document en format XML

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<author><name sortKey="Triantafyllidis, Alexandros" sort="Triantafyllidis, Alexandros" uniqKey="Triantafyllidis A" first="Alexandros" last="Triantafyllidis">Alexandros Triantafyllidis</name>
<affiliation><nlm:affiliation>Department of Genetics, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece. atriant@bio.auth.gr</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Bobori, Dimitra" sort="Bobori, Dimitra" uniqKey="Bobori D" first="Dimitra" last="Bobori">Dimitra Bobori</name>
</author>
<author><name sortKey="Koliamitra, Christine" sort="Koliamitra, Christine" uniqKey="Koliamitra C" first="Christine" last="Koliamitra">Christine Koliamitra</name>
</author>
<author><name sortKey="Gbandi, Emma" sort="Gbandi, Emma" uniqKey="Gbandi E" first="Emma" last="Gbandi">Emma Gbandi</name>
</author>
<author><name sortKey="Mpanti, Maria" sort="Mpanti, Maria" uniqKey="Mpanti M" first="Maria" last="Mpanti">Maria Mpanti</name>
</author>
<author><name sortKey="Petriki, Olga" sort="Petriki, Olga" uniqKey="Petriki O" first="Olga" last="Petriki">Olga Petriki</name>
</author>
<author><name sortKey="Karaiskou, Nikoletta" sort="Karaiskou, Nikoletta" uniqKey="Karaiskou N" first="Nikoletta" last="Karaiskou">Nikoletta Karaiskou</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">DNA barcoding analysis of fish species diversity in four north Greek lakes.</title>
<author><name sortKey="Triantafyllidis, Alexandros" sort="Triantafyllidis, Alexandros" uniqKey="Triantafyllidis A" first="Alexandros" last="Triantafyllidis">Alexandros Triantafyllidis</name>
<affiliation><nlm:affiliation>Department of Genetics, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece. atriant@bio.auth.gr</nlm:affiliation>
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<author><name sortKey="Bobori, Dimitra" sort="Bobori, Dimitra" uniqKey="Bobori D" first="Dimitra" last="Bobori">Dimitra Bobori</name>
</author>
<author><name sortKey="Koliamitra, Christine" sort="Koliamitra, Christine" uniqKey="Koliamitra C" first="Christine" last="Koliamitra">Christine Koliamitra</name>
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<author><name sortKey="Gbandi, Emma" sort="Gbandi, Emma" uniqKey="Gbandi E" first="Emma" last="Gbandi">Emma Gbandi</name>
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<author><name sortKey="Mpanti, Maria" sort="Mpanti, Maria" uniqKey="Mpanti M" first="Maria" last="Mpanti">Maria Mpanti</name>
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<author><name sortKey="Petriki, Olga" sort="Petriki, Olga" uniqKey="Petriki O" first="Olga" last="Petriki">Olga Petriki</name>
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<author><name sortKey="Karaiskou, Nikoletta" sort="Karaiskou, Nikoletta" uniqKey="Karaiskou N" first="Nikoletta" last="Karaiskou">Nikoletta Karaiskou</name>
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<series><title level="j">Mitochondrial DNA</title>
<idno type="e-ISSN">1940-1744</idno>
<imprint><date when="2011" type="published">2011</date>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term>
<term>Cyprinidae (classification)</term>
<term>Cyprinidae (genetics)</term>
<term>DNA Barcoding, Taxonomic (methods)</term>
<term>DNA Barcoding, Taxonomic (standards)</term>
<term>DNA, Mitochondrial (analysis)</term>
<term>DNA, Mitochondrial (genetics)</term>
<term>Electron Transport Complex IV (genetics)</term>
<term>Fishes (classification)</term>
<term>Fishes (genetics)</term>
<term>Genetic Variation</term>
<term>Greece</term>
<term>Lakes</term>
<term>Perciformes (classification)</term>
<term>Perciformes (genetics)</term>
<term>Sequence Analysis, DNA</term>
<term>Species Specificity</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>DNA, Mitochondrial</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Greece</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Cyprinidae</term>
<term>Fishes</term>
<term>Perciformes</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Cyprinidae</term>
<term>DNA, Mitochondrial</term>
<term>Electron Transport Complex IV</term>
<term>Fishes</term>
<term>Perciformes</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>DNA Barcoding, Taxonomic</term>
</keywords>
<keywords scheme="MESH" qualifier="standards" xml:lang="en"><term>DNA Barcoding, Taxonomic</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Genetic Variation</term>
<term>Lakes</term>
<term>Sequence Analysis, DNA</term>
<term>Species Specificity</term>
</keywords>
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<front><div type="abstract" xml:lang="en">The present study is the first to apply DNA barcoding on identifying 37 freshwater fish species from the rich Balkan ichthyofauna.</div>
</front>
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<DateCreated><Year>2011</Year>
<Month>10</Month>
<Day>10</Day>
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<DateCompleted><Year>2012</Year>
<Month>01</Month>
<Day>26</Day>
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<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1940-1744</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>22 Suppl 1</Volume>
<PubDate><Year>2011</Year>
<Month>Oct</Month>
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<Title>Mitochondrial DNA</Title>
<ISOAbbreviation>Mitochondrial DNA</ISOAbbreviation>
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<ArticleTitle>DNA barcoding analysis of fish species diversity in four north Greek lakes.</ArticleTitle>
<Pagination><MedlinePgn>37-42</MedlinePgn>
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<ELocationID EIdType="doi" ValidYN="Y">10.3109/19401736.2010.542242</ELocationID>
<Abstract><AbstractText Label="MATERIALS AND METHODS" NlmCategory="METHODS">The present study is the first to apply DNA barcoding on identifying 37 freshwater fish species from the rich Balkan ichthyofauna.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">The results are highly successful since in most cases barcodes cluster according to species, in agreement with morphological taxonomic studies. This is also evident based on mean conspecific and congeneric Kimura two-parameter distance values. The 5.6-fold difference between these values is lower than previous barcoding studies, possibly due to the restricted samplings and the recent taxonomy reevaluation for several species. A number of species were identified, where future work is needed: For the species Scardinius erythrophthalmus, Perca fluviatilis, and Rutilus rutilus, the divergence values found among conspecific populations could warrant their placement into different species; for Barbus and Rhodeus populations, the reported interspecific distances found were lower than expected; and for Cobitis species, the application of barcoding seems problematic, due to their complicated reproduction.</AbstractText>
<AbstractText Label="CONCLUSION" NlmCategory="CONCLUSIONS">The extension of this work to other Greek or even Balkan freshwater systems should clarify the situation.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Triantafyllidis</LastName>
<ForeName>Alexandros</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Department of Genetics, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece. atriant@bio.auth.gr</Affiliation>
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<Author ValidYN="Y"><LastName>Bobori</LastName>
<ForeName>Dimitra</ForeName>
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<Author ValidYN="Y"><LastName>Koliamitra</LastName>
<ForeName>Christine</ForeName>
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<Author ValidYN="Y"><LastName>Gbandi</LastName>
<ForeName>Emma</ForeName>
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<Author ValidYN="Y"><LastName>Mpanti</LastName>
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<Author ValidYN="Y"><LastName>Petriki</LastName>
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<Author ValidYN="Y"><LastName>Karaiskou</LastName>
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<Language>eng</Language>
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<MedlineTA>Mitochondrial DNA</MedlineTA>
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<MeshHeadingList><MeshHeading><DescriptorName MajorTopicYN="N" UI="D000818">Animals</DescriptorName>
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<MeshHeading><DescriptorName MajorTopicYN="N" UI="D003530">Cyprinidae</DescriptorName>
<QualifierName MajorTopicYN="N" UI="Q000145">classification</QualifierName>
<QualifierName MajorTopicYN="N" UI="Q000235">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D058893">DNA Barcoding, Taxonomic</DescriptorName>
<QualifierName MajorTopicYN="Y" UI="Q000379">methods</QualifierName>
<QualifierName MajorTopicYN="N" UI="Q000592">standards</QualifierName>
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<MeshHeading><DescriptorName MajorTopicYN="N" UI="D004272">DNA, Mitochondrial</DescriptorName>
<QualifierName MajorTopicYN="N" UI="Q000032">analysis</QualifierName>
<QualifierName MajorTopicYN="N" UI="Q000235">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D003576">Electron Transport Complex IV</DescriptorName>
<QualifierName MajorTopicYN="Y" UI="Q000235">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D005399">Fishes</DescriptorName>
<QualifierName MajorTopicYN="Y" UI="Q000145">classification</QualifierName>
<QualifierName MajorTopicYN="Y" UI="Q000235">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D014644">Genetic Variation</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" Type="Geographic" UI="D006115">Greece</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="Y" UI="D060106">Lakes</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D010473">Perciformes</DescriptorName>
<QualifierName MajorTopicYN="N" UI="Q000145">classification</QualifierName>
<QualifierName MajorTopicYN="N" UI="Q000235">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D017422">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName MajorTopicYN="N" UI="D013045">Species Specificity</DescriptorName>
</MeshHeading>
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DNA barcoding analysis of fish species diversity in four north Greek lakes.

DNA barcoding analysis of fish species diversity in four north Greek lakes.

Source :

English descriptors

Abstract

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

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