Diagnosis of an unidentified sturgeon species using the complete mitochondrial DNA.
Identifieur interne : 000151 ( PubMed/Curation ); précédent : 000150; suivant : 000152Diagnosis of an unidentified sturgeon species using the complete mitochondrial DNA.
Auteurs : Jeong-Nam Yu ; Myounghai Kwak ; Seon-Man Kweon ; O-Nam Kwon [Corée du Sud]Source :
- Mitochondrial DNA [ 1940-1744 ] ; 2015.
English descriptors
- KwdEn :
- MESH :
- chemical : DNA, Mitochondrial.
- classification : Fishes.
- genetics : Fishes.
- Animals, Genes, Mitochondrial, Genome, Mitochondrial, Open Reading Frames, Sequence Analysis, DNA.
Abstract
A sturgeon of unknown species of 11 kg body weight was caught in Gosung-gun, Gangwon Province, Korea (38°17'10.67″N, 128°33'20.28″E). The morphological characteristics were similar to species of the genus Acipenser such as Acipenser medirostris, A. schrenckii and A. baerii, but it was not an obvious match. To identify the species using genetic tools, we analysed the complete mitogenome of this unidentified sturgeon, and found it to comprise 16,526 bp. The genome encoded 2 rRNAs, 22 tRNAs, 13 protein-coding genes and 1 control region. The nucleotide divergence between the complete mitogenome of the unidentified sturgeon and those of four Acipenser spp. (A. transmontanus, A. dabryanus, A. schrenckii and A. baerii) was 0.736%, 3.875%, 0.085% and 5.580%, respectively. This study suggests that the unidentified sturgeon is able to predict the least maternal lines with A. schrenckii.
DOI: 10.3109/19401736.2013.855905
PubMed: 24409856
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000151
Links to Exploration step
pubmed:24409856Curation
No country items
Jeong-Nam Yu<affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation>Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Diagnosis of an unidentified sturgeon species using the complete mitochondrial DNA.</title><author><name sortKey="Yu, Jeong Nam" sort="Yu, Jeong Nam" uniqKey="Yu J" first="Jeong-Nam" last="Yu">Jeong-Nam Yu</name><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation></author><author><name sortKey="Kwak, Myounghai" sort="Kwak, Myounghai" uniqKey="Kwak M" first="Myounghai" last="Kwak">Myounghai Kwak</name><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation></author><author><name sortKey="Kweon, Seon Man" sort="Kweon, Seon Man" uniqKey="Kweon S" first="Seon-Man" last="Kweon">Seon-Man Kweon</name><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation></author><author><name sortKey="Kwon, O Nam" sort="Kwon, O Nam" uniqKey="Kwon O" first="O-Nam" last="Kwon">O-Nam Kwon</name><affiliation wicri:level="1"><nlm:affiliation>b Marine Biology Center for Research and Education, Gangneung-Wonju National University , Gangneung , Korea.</nlm:affiliation><country xml:lang="fr">Corée du Sud</country><wicri:regionArea>b Marine Biology Center for Research and Education, Gangneung-Wonju National University , Gangneung </wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:24409856</idno><idno type="pmid">24409856</idno><idno type="doi">10.3109/19401736.2013.855905</idno><idno type="wicri:Area/PubMed/Corpus">000151</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000151</idno><idno type="wicri:Area/PubMed/Curation">000151</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000151</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Diagnosis of an unidentified sturgeon species using the complete mitochondrial DNA.</title><author><name sortKey="Yu, Jeong Nam" sort="Yu, Jeong Nam" uniqKey="Yu J" first="Jeong-Nam" last="Yu">Jeong-Nam Yu</name><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation></author><author><name sortKey="Kwak, Myounghai" sort="Kwak, Myounghai" uniqKey="Kwak M" first="Myounghai" last="Kwak">Myounghai Kwak</name><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation></author><author><name sortKey="Kweon, Seon Man" sort="Kweon, Seon Man" uniqKey="Kweon S" first="Seon-Man" last="Kweon">Seon-Man Kweon</name><affiliation><nlm:affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</nlm:affiliation><wicri:noCountry code="subField">Korea and</wicri:noCountry></affiliation></author><author><name sortKey="Kwon, O Nam" sort="Kwon, O Nam" uniqKey="Kwon O" first="O-Nam" last="Kwon">O-Nam Kwon</name><affiliation wicri:level="1"><nlm:affiliation>b Marine Biology Center for Research and Education, Gangneung-Wonju National University , Gangneung , Korea.</nlm:affiliation><country xml:lang="fr">Corée du Sud</country><wicri:regionArea>b Marine Biology Center for Research and Education, Gangneung-Wonju National University , Gangneung </wicri:regionArea></affiliation></author></analytic><series><title level="j">Mitochondrial DNA</title><idno type="eISSN">1940-1744</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>DNA, Mitochondrial</term><term>Fishes (classification)</term><term>Fishes (genetics)</term><term>Genes, Mitochondrial</term><term>Genome, Mitochondrial</term><term>Open Reading Frames</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA, Mitochondrial</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Fishes</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Fishes</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Genes, Mitochondrial</term><term>Genome, Mitochondrial</term><term>Open Reading Frames</term><term>Sequence Analysis, DNA</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A sturgeon of unknown species of 11 kg body weight was caught in Gosung-gun, Gangwon Province, Korea (38°17'10.67″N, 128°33'20.28″E). The morphological characteristics were similar to species of the genus Acipenser such as Acipenser medirostris, A. schrenckii and A. baerii, but it was not an obvious match. To identify the species using genetic tools, we analysed the complete mitogenome of this unidentified sturgeon, and found it to comprise 16,526 bp. The genome encoded 2 rRNAs, 22 tRNAs, 13 protein-coding genes and 1 control region. The nucleotide divergence between the complete mitogenome of the unidentified sturgeon and those of four Acipenser spp. (A. transmontanus, A. dabryanus, A. schrenckii and A. baerii) was 0.736%, 3.875%, 0.085% and 5.580%, respectively. This study suggests that the unidentified sturgeon is able to predict the least maternal lines with A. schrenckii.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24409856</PMID><DateCreated><Year>2015</Year><Month>09</Month><Day>22</Day></DateCreated><DateCompleted><Year>2016</Year><Month>06</Month><Day>17</Day></DateCompleted><DateRevised><Year>2015</Year><Month>09</Month><Day>22</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1940-1744</ISSN><JournalIssue CitedMedium="Internet"><Volume>26</Volume><Issue>5</Issue><PubDate><Year>2015</Year></PubDate></JournalIssue><Title>Mitochondrial DNA</Title><ISOAbbreviation>Mitochondrial DNA</ISOAbbreviation></Journal><ArticleTitle>Diagnosis of an unidentified sturgeon species using the complete mitochondrial DNA.</ArticleTitle><Pagination><MedlinePgn>811-2</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3109/19401736.2013.855905</ELocationID><Abstract><AbstractText>A sturgeon of unknown species of 11 kg body weight was caught in Gosung-gun, Gangwon Province, Korea (38°17'10.67″N, 128°33'20.28″E). The morphological characteristics were similar to species of the genus Acipenser such as Acipenser medirostris, A. schrenckii and A. baerii, but it was not an obvious match. To identify the species using genetic tools, we analysed the complete mitogenome of this unidentified sturgeon, and found it to comprise 16,526 bp. The genome encoded 2 rRNAs, 22 tRNAs, 13 protein-coding genes and 1 control region. The nucleotide divergence between the complete mitogenome of the unidentified sturgeon and those of four Acipenser spp. (A. transmontanus, A. dabryanus, A. schrenckii and A. baerii) was 0.736%, 3.875%, 0.085% and 5.580%, respectively. This study suggests that the unidentified sturgeon is able to predict the least maternal lines with A. schrenckii.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Yu</LastName><ForeName>Jeong-Nam</ForeName><Initials>JN</Initials><AffiliationInfo><Affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kwak</LastName><ForeName>Myounghai</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kweon</LastName><ForeName>Seon-Man</ForeName><Initials>SM</Initials><AffiliationInfo><Affiliation>a National Institute of Biological Resources, Environmental Research Complex, Gyeongseo-dong, Seo-gu , Incheon , Korea and.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kwon</LastName><ForeName>O-Nam</ForeName><Initials>ON</Initials><AffiliationInfo><Affiliation>b Marine Biology Center for Research and Education, Gangneung-Wonju National University , Gangneung , Korea.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>01</Month><Day>10</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mitochondrial DNA</MedlineTA><NlmUniqueID>101487102</NlmUniqueID><ISSNLinking>1940-1736</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004272">DNA, Mitochondrial</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004272" MajorTopicYN="Y">DNA, Mitochondrial</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005399" MajorTopicYN="N">Fishes</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D050259" MajorTopicYN="N">Genes, Mitochondrial</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D054629" MajorTopicYN="Y">Genome, Mitochondrial</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016366" MajorTopicYN="N">Open Reading Frames</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Acipenser</Keyword><Keyword MajorTopicYN="N">complete mitogenome</Keyword><Keyword MajorTopicYN="N">mitochondrial DNA</Keyword><Keyword MajorTopicYN="N">sturgeon</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>1</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>1</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2016</Year><Month>6</Month><Day>18</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">24409856</ArticleId><ArticleId IdType="doi">10.3109/19401736.2013.855905</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Eau/explor/EsturgeonV1/Data/PubMed/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000151 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd -nk 000151 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Eau
|area= EsturgeonV1
|flux= PubMed
|étape= Curation
|type= RBID
|clé= pubmed:24409856
|texte= Diagnosis of an unidentified sturgeon species using the complete mitochondrial DNA.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Curation/RBID.i -Sk "pubmed:24409856" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd \
| NlmPubMed2Wicri -a EsturgeonV1
| This area was generated with Dilib version V0.6.27. |  |